RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 BSDC1Q9NW68 430 aaPredicted RBP15.43■□□□□ 0.06
CPNE1-201ENST00000317677 MINPP1Q9UNW1 487 aa15.43■□□□□ 0.06
CPNE1-201ENST00000317677 LIMCH1Q9UPQ0 1083 aa15.43■□□□□ 0.06
CPNE1-201ENST00000317677 COL1A1P02452 1464 aaPredicted RBP15.42■□□□□ 0.06
CPNE1-201ENST00000317677 BAG4O95429 457 aaKnown RBP15.42■□□□□ 0.06
CPNE1-201ENST00000317677 ZFYP08048 801 aaPredicted RBP15.42■□□□□ 0.06
CPNE1-201ENST00000317677 ADRA2BP18089 450 aa15.42■□□□□ 0.06
CPNE1-201ENST00000317677 RPS6KB1P23443 525 aa15.42■□□□□ 0.06
CPNE1-201ENST00000317677 TPTE2Q6XPS3 522 aa15.42■□□□□ 0.06
CPNE1-201ENST00000317677 WWC3Q9ULE0 1092 aa15.42■□□□□ 0.06
CPNE1-201ENST00000317677 CARMIL3Q8ND23 1372 aa15.42■□□□□ 0.06
CPNE1-201ENST00000317677 TCRBV5S4A2TA0A5A2 114 aa15.42■□□□□ 0.06
CPNE1-201ENST00000317677 GYS1P13807 737 aa15.42■□□□□ 0.06
CPNE1-201ENST00000317677 CBX1P83916 185 aa15.42■□□□□ 0.06
CPNE1-201ENST00000317677 TOB2Q14106 344 aaPredicted RBP15.42■□□□□ 0.06
CPNE1-201ENST00000317677 ZSCAN23Q3MJ62 389 aa15.42■□□□□ 0.06
CPNE1-201ENST00000317677 TTLL5Q6EMB2 1281 aa15.42■□□□□ 0.06
CPNE1-201ENST00000317677 SPATA5Q8NB90 893 aa15.42■□□□□ 0.06
CPNE1-201ENST00000317677 SGIP1Q9BQI5 828 aa15.42■□□□□ 0.06
CPNE1-201ENST00000317677 DTNBO60941 627 aa15.41■□□□□ 0.06
CPNE1-201ENST00000317677 NUCB2P80303 420 aa15.41■□□□□ 0.06
CPNE1-201ENST00000317677 WASHC4Q2M389 1173 aa15.41■□□□□ 0.06
CPNE1-201ENST00000317677 BLOC1S2Q6QNY1 142 aa15.41■□□□□ 0.06
CPNE1-201ENST00000317677 NLRP3Q96P20 1036 aa15.41■□□□□ 0.06
CPNE1-201ENST00000317677 TPCN1Q9ULQ1 816 aa15.41■□□□□ 0.06
CPNE1-201ENST00000317677 ZNF804BA4D1E1 1349 aa15.41■□□□□ 0.06
CPNE1-201ENST00000317677 PSMA5P28066 241 aa15.4■□□□□ 0.06
CPNE1-201ENST00000317677 KIAA2012Q0VF49 1180 aa15.4■□□□□ 0.06
CPNE1-201ENST00000317677 ME3Q16798 604 aa15.4■□□□□ 0.06
CPNE1-201ENST00000317677 COL23A1Q86Y22 540 aaPredicted RBP15.4■□□□□ 0.06
CPNE1-201ENST00000317677 ALDH8A1Q9H2A2 487 aaPredicted RBP15.4■□□□□ 0.06
CPNE1-201ENST00000317677 PDE6AP16499 860 aa15.4■□□□□ 0.06
CPNE1-201ENST00000317677 TTF1Q15361 905 aaPredicted RBP15.4■□□□□ 0.06
CPNE1-201ENST00000317677 SLC9C2Q5TAH2 1124 aa15.4■□□□□ 0.06
CPNE1-201ENST00000317677 ZNF830Q96NB3 372 aaPredicted RBP15.4■□□□□ 0.06
CPNE1-201ENST00000317677 ZNF532Q9HCE3 1301 aa15.39■□□□□ 0.05
CPNE1-201ENST00000317677 GPAA1O43292 621 aa15.39■□□□□ 0.05
CPNE1-201ENST00000317677 IDH1O75874 414 aaKnown RBP15.39■□□□□ 0.05
CPNE1-201ENST00000317677 KLRK1P26718 216 aa15.39■□□□□ 0.05
CPNE1-201ENST00000317677 GYG1P46976 350 aa15.39■□□□□ 0.05
CPNE1-201ENST00000317677 RPS8P62241 208 aaKnown RBP15.39■□□□□ 0.05
CPNE1-201ENST00000317677 PRR5LQ6MZQ0 368 aa15.39■□□□□ 0.05
CPNE1-201ENST00000317677 CHAMP1Q96JM3 812 aa15.39■□□□□ 0.05
CPNE1-201ENST00000317677 NEK1Q96PY6 1258 aa15.39■□□□□ 0.05
CPNE1-201ENST00000317677 FEZ1Q99689 392 aa15.39■□□□□ 0.05
CPNE1-201ENST00000317677 FHDC1Q9C0D6 1143 aaPredicted RBP15.39■□□□□ 0.05
CPNE1-201ENST00000317677 UBE4AQ14139 1066 aa15.38■□□□□ 0.05
CPNE1-201ENST00000317677 KRT32Q14532 448 aa15.38■□□□□ 0.05
CPNE1-201ENST00000317677 UBE3CQ15386 1083 aa15.38■□□□□ 0.05
CPNE1-201ENST00000317677 LRRFIP1Q32MZ4 808 aaKnown RBP15.38■□□□□ 0.05
CPNE1-201ENST00000317677 ARID3AQ99856 593 aa15.38■□□□□ 0.05
CPNE1-201ENST00000317677 BRD1O95696 1058 aa15.38■□□□□ 0.05
CPNE1-201ENST00000317677 CCDC83Q8IWF9 413 aa15.38■□□□□ 0.05
CPNE1-201ENST00000317677 NECAB1Q8N987 351 aa15.38■□□□□ 0.05
CPNE1-201ENST00000317677 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.38■□□□□ 0.053e-7■■■■□ 26
CPNE1-201ENST00000317677 IQSEC3Q9UPP2 1182 aaPredicted RBP15.38■□□□□ 0.05
CPNE1-201ENST00000317677 MYH13Q9UKX3 1938 aa15.38■□□□□ 0.05
CPNE1-201ENST00000317677 DDR1Q08345 913 aa15.37■□□□□ 0.05
CPNE1-201ENST00000317677 SYT17Q9BSW7 474 aa15.37■□□□□ 0.05
CPNE1-201ENST00000317677 CACNA1SQ13698 1873 aa15.37■□□□□ 0.05
CPNE1-201ENST00000317677 IRS2Q9Y4H2 1338 aa15.37■□□□□ 0.05
CPNE1-201ENST00000317677 E7EWF7 191 aa15.36■□□□□ 0.05
CPNE1-201ENST00000317677 FGAP02671 866 aa15.36■□□□□ 0.05
CPNE1-201ENST00000317677 ZSCAN25Q6NSZ9 544 aa15.36■□□□□ 0.05
CPNE1-201ENST00000317677 CNBD1Q8NA66 436 aa15.36■□□□□ 0.05
CPNE1-201ENST00000317677 FAM84BQ96KN1 310 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-201ENST00000317677 ZSCAN31Q96LW9 406 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-201ENST00000317677 LMBRD1Q9NUN5 540 aa15.36■□□□□ 0.05
CPNE1-201ENST00000317677 KIF3AQ9Y496 699 aa15.36■□□□□ 0.05
CPNE1-201ENST00000317677 ANKRD31Q8N7Z5 1873 aa15.36■□□□□ 0.05
CPNE1-201ENST00000317677 FOXD4L5Q5VV16 416 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-201ENST00000317677 FOXD4L4Q8WXT5 416 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-201ENST00000317677 LRRC2Q9BYS8 371 aa15.36■□□□□ 0.05
CPNE1-201ENST00000317677 SH2B1Q9NRF2 756 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-201ENST00000317677 HAND2P61296 217 aa15.35■□□□□ 0.05
CPNE1-201ENST00000317677 EXOSC10Q01780 885 aaKnown RBP15.35■□□□□ 0.05
CPNE1-201ENST00000317677 GABPB1Q06547 395 aaPredicted RBP15.35■□□□□ 0.05
CPNE1-201ENST00000317677 LRSAM1Q6UWE0 723 aa15.35■□□□□ 0.05
CPNE1-201ENST00000317677 MAGEB6Q8N7X4 407 aa15.35■□□□□ 0.05
CPNE1-201ENST00000317677 NBPF3Q9H094 633 aa15.35■□□□□ 0.05
CPNE1-201ENST00000317677 SERPINB2P05120 415 aa15.35■□□□□ 0.05
CPNE1-201ENST00000317677 Q6ZUG5 572 aa15.35■□□□□ 0.05
CPNE1-201ENST00000317677 FBXO33Q7Z6M2 555 aa15.35■□□□□ 0.05
CPNE1-201ENST00000317677 KLHL34Q8N239 644 aa15.35■□□□□ 0.05
CPNE1-201ENST00000317677 NKX2-3Q8TAU0 364 aa15.35■□□□□ 0.05
CPNE1-201ENST00000317677 PIBF1Q8WXW3 757 aa15.35■□□□□ 0.05
CPNE1-201ENST00000317677 STRBPQ96SI9 672 aaKnown RBP15.35■□□□□ 0.05
CPNE1-201ENST00000317677 NRXN2Q9P2S2 1712 aa15.34■□□□□ 0.05
CPNE1-201ENST00000317677 CAVIN1Q6NZI2 390 aaKnown RBP15.34■□□□□ 0.05
CPNE1-201ENST00000317677 TXNRD3Q86VQ6 643 aa15.34■□□□□ 0.05
CPNE1-201ENST00000317677 POLRMTO00411 1230 aaKnown RBP15.33■□□□□ 0.05
CPNE1-201ENST00000317677 GRAPQ13588 217 aa15.33■□□□□ 0.05
CPNE1-201ENST00000317677 ANKRD1Q15327 319 aa15.33■□□□□ 0.05
CPNE1-201ENST00000317677 MSL1Q68DK7 614 aa15.33■□□□□ 0.05
CPNE1-201ENST00000317677 GRAPLQ8TC17 118 aaPredicted RBP15.33■□□□□ 0.05
CPNE1-201ENST00000317677 ANKRD7Q92527 254 aa15.33■□□□□ 0.05
CPNE1-201ENST00000317677 AGXT2Q9BYV1 514 aa15.33■□□□□ 0.05
CPNE1-201ENST00000317677 EPB41L4AQ9HCS5 686 aaPredicted RBP15.33■□□□□ 0.05
CPNE1-201ENST00000317677 SPTLC3Q9NUV7 552 aa15.33■□□□□ 0.05
CPNE1-201ENST00000317677 MAP3K12Q12852 859 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms