RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 APOBRQ0VD83 1088 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 USP37Q86T82 979 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 FAM114A1Q8IWE2 563 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 ADCY10Q96PN6 1610 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 ZBTB38Q8NAP3 1195 aaPredicted RBP12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 ABCC3O15438 1527 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 SYCE3A1L190 88 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 NEURL1BA8MQ27 555 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 GOLGA6L10A6NI86 522 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 PTPRTO14522 1441 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 TNNQ9UQP3 1299 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 KRT13P13646 458 aa12.21□□□□□ -0.45
SYNPO2-201ENST00000307142 CCDC129Q6ZRS4 1044 aa12.21□□□□□ -0.45
SYNPO2-201ENST00000307142 SLC5A4Q9NY91 659 aa12.21□□□□□ -0.45
SYNPO2-201ENST00000307142 MAP3K15Q6ZN16 1313 aa12.21□□□□□ -0.45
SYNPO2-201ENST00000307142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.21□□□□□ -0.45
SYNPO2-201ENST00000307142 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.21□□□□□ -0.45
SYNPO2-201ENST00000307142 PCDHB15Q9Y5E8 787 aa12.21□□□□□ -0.45
SYNPO2-201ENST00000307142 RBM6P78332 1123 aaKnown RBP12.21□□□□□ -0.45
SYNPO2-201ENST00000307142 DCAF15Q66K64 600 aa12.21□□□□□ -0.45
SYNPO2-201ENST00000307142 ANKARQ7Z5J8 1434 aa12.21□□□□□ -0.45
SYNPO2-201ENST00000307142 B4E1Z4 1266 aa12.21□□□□□ -0.46
SYNPO2-201ENST00000307142 CTAGE5O15320 804 aa12.21□□□□□ -0.46
SYNPO2-201ENST00000307142 SLC1A4P43007 532 aa12.21□□□□□ -0.46
SYNPO2-201ENST00000307142 GINS2Q9Y248 185 aa12.21□□□□□ -0.46
SYNPO2-201ENST00000307142 CCDC183Q5T5S1 534 aa12.21□□□□□ -0.46
SYNPO2-201ENST00000307142 DBNDD2Q9BQY9 259 aa12.21□□□□□ -0.46
SYNPO2-201ENST00000307142 CHMP2AO43633 222 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 CREB3L3Q68CJ9 461 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 ZSCAN16Q9H4T2 348 aaPredicted RBP12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 CHL1O00533 1208 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 BMP15O95972 392 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 SPOUT1Q5T280 376 aaKnown RBP12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 ARHGEF25Q86VW2 580 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 FNBP4Q8N3X1 1017 aaPredicted RBP12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 CENPHQ9H3R5 247 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 SPC25Q9HBM1 224 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 LRSAM1Q6UWE0 723 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 APBB1IPQ7Z5R6 666 aaPredicted RBP12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 ADGRL3Q9HAR2 1447 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 ARHGAP29Q52LW3 1261 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 OTUD7BQ6GQQ9 843 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 IQCEQ6IPM2 695 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 CPLX3Q8WVH0 158 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 RMND1Q9NWS8 449 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 GIGYF1O75420 1035 aaPredicted RBP12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 TBC1D5Q92609 795 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 DNA2P51530 1060 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 CCDC102BQ68D86 513 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 TRIM47Q96LD4 638 aa12.2□□□□□ -0.46
SYNPO2-201ENST00000307142 ZBTB7AO95365 584 aa12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 GYG1P46976 350 aa12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 IMPG2Q9BZV3 1241 aa12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 MBD5Q9P267 1494 aa12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 KRT79Q5XKE5 535 aa12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 FAM43AQ8N2R8 423 aa12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 GDPD2Q9HCC8 539 aa12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 DDX39AO00148 427 aaKnown RBP12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 GPAA1O43292 621 aa12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 RIMS1Q86UR5 1692 aaKnown RBP12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 MARCKSP29966 332 aaPredicted RBP12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 SYKP43405 635 aa12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 CTDSPL2Q05D32 466 aa12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 TOP1P11387 765 aaKnown RBP12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 ZRSR2Q15696 482 aaKnown RBP12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 RRAGBQ5VZM2 374 aa12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 IL17REQ8NFR9 667 aa12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 TRIM35Q9UPQ4 493 aa12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 ASIC1P78348 528 aa12.19□□□□□ -0.46
SYNPO2-201ENST00000307142 ZNF532Q9HCE3 1301 aa12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 USP6P35125 1406 aa12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 BLMP54132 1417 aaPredicted RBP12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 CCNT1O60563 726 aaKnown RBP12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 PRDM1O75626 825 aa12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 RFX1P22670 979 aa12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 ZAP70P43403 619 aa12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 PABPC4Q13310 644 aaKnown RBP eCLIP12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 ERFEQ4G0M1 354 aa12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 TRIM6Q9C030 488 aaPredicted RBP12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 NDUFB9Q9Y6M9 179 aa12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 M0QZ92 97 aa12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 DCTPP1Q9H773 170 aa12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 ATP7BP35670 1465 aa12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 NSMFQ6X4W1 530 aa12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 DTHD1Q6ZMT9 781 aa12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 APPBP2Q92624 585 aa12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 PSMD1Q99460 953 aa12.18□□□□□ -0.46
SYNPO2-201ENST00000307142 LETM2Q2VYF4 491 aa12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 AXDND1Q5T1B0 1012 aaPredicted RBP12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 DBNDD1Q9H9R9 158 aa12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 CLRN2A0PK11 232 aa12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 HARSP12081 509 aaKnown RBP12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 EN1Q05925 392 aaPredicted RBP12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 FAM47CQ5HY64 1035 aa12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 TRIM75PA6NK02 468 aa12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 CHRNDQ07001 517 aa12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 PLIN2Q99541 437 aa12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 BCAMP50895 628 aa12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 ARHGEF6Q15052 776 aa12.17□□□□□ -0.46
SYNPO2-201ENST00000307142 TAX1BP1Q86VP1 789 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms