RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 APPBP2Q92624 585 aa11.81□□□□□ -0.52
COPB1-201ENST00000249923 RXRAP19793 462 aa11.81□□□□□ -0.52
COPB1-201ENST00000249923 ITGA6P23229 1130 aa11.81□□□□□ -0.52
COPB1-201ENST00000249923 ME1P48163 572 aa11.81□□□□□ -0.52
COPB1-201ENST00000249923 DPCR1Q3MIW9 517 aa11.81□□□□□ -0.52
COPB1-201ENST00000249923 GORABQ5T7V8 394 aa11.81□□□□□ -0.52
COPB1-201ENST00000249923 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.81□□□□□ -0.52
COPB1-201ENST00000249923 FBXO18Q8NFZ0 1043 aa11.81□□□□□ -0.52
COPB1-201ENST00000249923 UBN2Q6ZU65 1347 aa11.81□□□□□ -0.52
COPB1-201ENST00000249923 ARAP2Q8WZ64 1704 aa11.81□□□□□ -0.52
COPB1-201ENST00000249923 GOLGA8BA8MQT2 603 aa11.81□□□□□ -0.52
COPB1-201ENST00000249923 CCDC158Q5M9N0 1113 aa11.81□□□□□ -0.52
COPB1-201ENST00000249923 AXDND1Q5T1B0 1012 aaPredicted RBP11.81□□□□□ -0.52
COPB1-201ENST00000249923 TCRBV5S4A2TA0A5A2 114 aa11.8□□□□□ -0.52
COPB1-201ENST00000249923 CTIFO43310 598 aaKnown RBP11.8□□□□□ -0.52
COPB1-201ENST00000249923 WDHD1O75717 1129 aaPredicted RBP11.8□□□□□ -0.52
COPB1-201ENST00000249923 STX1AQ16623 288 aa11.8□□□□□ -0.52
COPB1-201ENST00000249923 GIGYF2Q6Y7W6 1299 aaKnown RBP11.8□□□□□ -0.52
COPB1-201ENST00000249923 SYTL4Q96C24 671 aaPredicted RBP11.8□□□□□ -0.52
COPB1-201ENST00000249923 TRMT1Q9NXH9 659 aaKnown RBP11.8□□□□□ -0.52
COPB1-201ENST00000249923 TMOD3Q9NYL9 352 aa11.8□□□□□ -0.52
COPB1-201ENST00000249923 MAP3K15Q6ZN16 1313 aa11.8□□□□□ -0.52
COPB1-201ENST00000249923 DOCK2Q92608 1830 aa11.8□□□□□ -0.52
COPB1-201ENST00000249923 CDC27P30260 824 aa11.8□□□□□ -0.52
COPB1-201ENST00000249923 CDC25BP30305 580 aa11.8□□□□□ -0.52
COPB1-201ENST00000249923 ADD2P35612 726 aa11.8□□□□□ -0.52
COPB1-201ENST00000249923 NAA30Q147X3 362 aaPredicted RBP11.8□□□□□ -0.52
COPB1-201ENST00000249923 FILIP1Q7Z7B0 1213 aa11.8□□□□□ -0.52
COPB1-201ENST00000249923 WWC3Q9ULE0 1092 aa11.8□□□□□ -0.52
COPB1-201ENST00000249923 PHKA1P46020 1223 aa11.8□□□□□ -0.52
COPB1-201ENST00000249923 KIF23Q02241 960 aaPredicted RBP11.8□□□□□ -0.52
COPB1-201ENST00000249923 IFIT5Q13325 482 aaKnown RBP11.8□□□□□ -0.52
COPB1-201ENST00000249923 ATP2B3Q16720 1220 aa11.8□□□□□ -0.52
COPB1-201ENST00000249923 TPD52L1Q16890 204 aaPredicted RBP11.8□□□□□ -0.52
COPB1-201ENST00000249923 IMMTQ16891 758 aaKnown RBP11.8□□□□□ -0.52
COPB1-201ENST00000249923 LRRC8AQ8IWT6 810 aa11.8□□□□□ -0.52
COPB1-201ENST00000249923 HSD3B7Q9H2F3 369 aa11.8□□□□□ -0.52
COPB1-201ENST00000249923 CCZ1BP86790 482 aa11.79□□□□□ -0.52
COPB1-201ENST00000249923 CCZ1P86791 482 aaPredicted RBP11.79□□□□□ -0.52
COPB1-201ENST00000249923 MYSM1Q5VVJ2 828 aa11.79□□□□□ -0.52
COPB1-201ENST00000249923 ADALQ6DHV7 355 aa11.79□□□□□ -0.52
COPB1-201ENST00000249923 FAM217BQ9NTX9 383 aaPredicted RBP11.79□□□□□ -0.52
COPB1-201ENST00000249923 SLAIN2Q9P270 581 aa11.79□□□□□ -0.52
COPB1-201ENST00000249923 ZBTB1Q9Y2K1 713 aa11.79□□□□□ -0.52
COPB1-201ENST00000249923 TPM3P06753 285 aa11.79□□□□□ -0.52
COPB1-201ENST00000249923 AOPEPQ8N6M6 819 aa11.79□□□□□ -0.52
COPB1-201ENST00000249923 MRFAP1L1Q96HT8 127 aa11.79□□□□□ -0.52
COPB1-201ENST00000249923 EPB41L4AQ9HCS5 686 aaPredicted RBP11.79□□□□□ -0.52
COPB1-201ENST00000249923 POLR3EQ9NVU0 708 aa11.79□□□□□ -0.52
COPB1-201ENST00000249923 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
COPB1-201ENST00000249923 CDHR2Q9BYE9 1310 aa11.79□□□□□ -0.52
COPB1-201ENST00000249923 GOLGA6L6A8MZA4 724 aa11.79□□□□□ -0.52
COPB1-201ENST00000249923 RANBP6O60518 1105 aaKnown RBP11.79□□□□□ -0.52
COPB1-201ENST00000249923 CTSWP56202 376 aa11.79□□□□□ -0.52
COPB1-201ENST00000249923 MRPS27Q92552 414 aaKnown RBP11.79□□□□□ -0.52
COPB1-201ENST00000249923 ORC3Q9UBD5 711 aaPredicted RBP11.79□□□□□ -0.52
COPB1-201ENST00000249923 AKAP2Q9Y2D5 859 aa11.79□□□□□ -0.52
COPB1-201ENST00000249923 CHD4Q14839 1912 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 DISP2A7MBM2 1401 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 BCL9O00512 1426 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 ZNF335Q9H4Z2 1342 aaPredicted RBP11.78□□□□□ -0.52
COPB1-201ENST00000249923 ZFYP08048 801 aaPredicted RBP11.78□□□□□ -0.52
COPB1-201ENST00000249923 CYP19A1P11511 503 aaPredicted RBP11.78□□□□□ -0.52
COPB1-201ENST00000249923 ZRSR1Q15695 479 aaKnown RBP11.78□□□□□ -0.52
COPB1-201ENST00000249923 SLC9C2Q5TAH2 1124 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 ANKRD7Q92527 254 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 C8orf76Q96K31 380 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 ABCC12Q96J65 1359 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 A0A1W2PQ27 194 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 A0A1W2PQ64 194 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 A0A1W2PQD8 194 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 NCAPHQ15003 741 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 METTL24Q5JXM2 366 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 ATL3Q6DD88 541 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 LDHAL6AQ6ZMR3 332 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 PHKBQ93100 1093 aa11.78□□□□□ -0.52
COPB1-201ENST00000249923 ZNF396Q96N95 335 aaPredicted RBP11.78□□□□□ -0.52
COPB1-201ENST00000249923 KINO60870 393 aaKnown RBP11.77□□□□□ -0.52
COPB1-201ENST00000249923 NTRK3Q16288 839 aa11.77□□□□□ -0.52
COPB1-201ENST00000249923 CCDC73Q6ZRK6 1079 aa11.77□□□□□ -0.52
COPB1-201ENST00000249923 HELBQ8NG08 1087 aaPredicted RBP11.77□□□□□ -0.52
COPB1-201ENST00000249923 NCOA7Q8NI08 942 aa11.77□□□□□ -0.52
COPB1-201ENST00000249923 BBXQ8WY36 941 aaPredicted RBP11.77□□□□□ -0.52
COPB1-201ENST00000249923 ZFP91Q96JP5 570 aaPredicted RBP11.77□□□□□ -0.52
COPB1-201ENST00000249923 MYL10Q9BUA6 226 aa11.77□□□□□ -0.52
COPB1-201ENST00000249923 ZNF532Q9HCE3 1301 aa11.77□□□□□ -0.53
COPB1-201ENST00000249923 SH2B2O14492 632 aaPredicted RBP11.77□□□□□ -0.53
COPB1-201ENST00000249923 CTAGE5O15320 804 aa11.77□□□□□ -0.53
COPB1-201ENST00000249923 CCDC102BQ68D86 513 aa11.77□□□□□ -0.53
COPB1-201ENST00000249923 CCDC94Q9BW85 323 aaPredicted RBP11.77□□□□□ -0.53
COPB1-201ENST00000249923 ZNF213O14771 459 aa11.77□□□□□ -0.53
COPB1-201ENST00000249923 RBM6P78332 1123 aaKnown RBP11.77□□□□□ -0.53
COPB1-201ENST00000249923 NCBP1Q09161 790 aaKnown RBP11.77□□□□□ -0.53
COPB1-201ENST00000249923 MTERF4Q7Z6M4 381 aaKnown RBP11.77□□□□□ -0.53
COPB1-201ENST00000249923 PLCD3Q8N3E9 789 aa11.77□□□□□ -0.53
COPB1-201ENST00000249923 IGDCC4Q8TDY8 1250 aa11.77□□□□□ -0.53
COPB1-201ENST00000249923 KIAA1468Q9P260 1216 aa11.77□□□□□ -0.53
COPB1-201ENST00000249923 CTNNA3Q9UI47 895 aa11.77□□□□□ -0.53
COPB1-201ENST00000249923 B4E1Z4 1266 aa11.76□□□□□ -0.53
COPB1-201ENST00000249923 SMIM22K7EJ46 135 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms