RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 EPHA10Q5JZY3 1008 aa17.51■□□□□ 0.39
DDX39A-201ENST00000242776 MFSD14BQ5SR56 506 aa17.51■□□□□ 0.39
DDX39A-201ENST00000242776 LDHAL6AQ6ZMR3 332 aa17.51■□□□□ 0.39
DDX39A-201ENST00000242776 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.51■□□□□ 0.39
DDX39A-201ENST00000242776 C15orf52Q6ZUT6 534 aaKnown RBP17.51■□□□□ 0.39
DDX39A-201ENST00000242776 FAM43AQ8N2R8 423 aa17.51■□□□□ 0.39
DDX39A-201ENST00000242776 ZFYVE28Q9HCC9 887 aa17.51■□□□□ 0.39
DDX39A-201ENST00000242776 SPDYE2Q495Y8 402 aa17.5■□□□□ 0.39
DDX39A-201ENST00000242776 CCDC184Q52MB2 194 aa17.5■□□□□ 0.39
DDX39A-201ENST00000242776 ARHGAP39Q9C0H5 1083 aa17.5■□□□□ 0.39
DDX39A-201ENST00000242776 IQSEC3Q9UPP2 1182 aaPredicted RBP17.5■□□□□ 0.39
DDX39A-201ENST00000242776 SALL2Q9Y467 1007 aaPredicted RBP17.5■□□□□ 0.39
DDX39A-201ENST00000242776 CACNA1FO60840 1977 aa17.5■□□□□ 0.39
DDX39A-201ENST00000242776 ARAP2Q8WZ64 1704 aa17.5■□□□□ 0.39
DDX39A-201ENST00000242776 UNCXA6NJT0 531 aa17.5■□□□□ 0.39
DDX39A-201ENST00000242776 CACNB3P54284 484 aa17.5■□□□□ 0.39
DDX39A-201ENST00000242776 FKBP1AP62942 108 aaKnown RBP17.5■□□□□ 0.39
DDX39A-201ENST00000242776 TNFAIP1Q13829 316 aa17.5■□□□□ 0.39
DDX39A-201ENST00000242776 CCDC57Q2TAC2 916 aa17.5■□□□□ 0.39
DDX39A-201ENST00000242776 NBPF11Q86T75 865 aa17.5■□□□□ 0.39
DDX39A-201ENST00000242776 MAP3K9P80192 1104 aa17.49■□□□□ 0.39
DDX39A-201ENST00000242776 WWC1Q8IX03 1113 aa17.49■□□□□ 0.39
DDX39A-201ENST00000242776 DZIP1LQ8IYY4 767 aaKnown RBP17.49■□□□□ 0.39
DDX39A-201ENST00000242776 TEPSINQ96N21 525 aa17.49■□□□□ 0.39
DDX39A-201ENST00000242776 CSADQ9Y600 493 aa17.49■□□□□ 0.39
DDX39A-201ENST00000242776 CRKP46108 304 aa17.48■□□□□ 0.39
DDX39A-201ENST00000242776 GTF2A2P52657 109 aa17.48■□□□□ 0.39
DDX39A-201ENST00000242776 CHAF1AQ13111 956 aaPredicted RBP17.48■□□□□ 0.39
DDX39A-201ENST00000242776 GRIK5Q16478 980 aa17.48■□□□□ 0.39
DDX39A-201ENST00000242776 CEP290O15078 2479 aa17.48■□□□□ 0.39
DDX39A-201ENST00000242776 H0YGN5 161 aa17.47■□□□□ 0.39
DDX39A-201ENST00000242776 HIBADHP31937 336 aaKnown RBP17.47■□□□□ 0.39
DDX39A-201ENST00000242776 ARHGEF6Q15052 776 aa17.47■□□□□ 0.39
DDX39A-201ENST00000242776 PUS3Q9BZE2 481 aaKnown RBP17.47■□□□□ 0.39
DDX39A-201ENST00000242776 FAM205AQ6ZU69 1335 aa17.47■□□□□ 0.39
DDX39A-201ENST00000242776 TNNI2P48788 182 aa17.46■□□□□ 0.39
DDX39A-201ENST00000242776 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.46■□□□□ 0.393e-14■□□□□ 9.4
DDX39A-201ENST00000242776 TDRD7Q8NHU6 1098 aaKnown RBP17.46■□□□□ 0.39
DDX39A-201ENST00000242776 SERPINA10Q9UK55 444 aa17.46■□□□□ 0.39
DDX39A-201ENST00000242776 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.39
DDX39A-201ENST00000242776 TRIOBPQ9H2D6 2365 aa17.46■□□□□ 0.39
DDX39A-201ENST00000242776 BEND3Q5T5X7 828 aa17.45■□□□□ 0.38
DDX39A-201ENST00000242776 ZKSCAN4Q969J2 545 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-201ENST00000242776 FAM84BQ96KN1 310 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-201ENST00000242776 AK9Q5TCS8 1911 aa17.45■□□□□ 0.38
DDX39A-201ENST00000242776 EXOSC9Q06265 439 aaKnown RBP17.44■□□□□ 0.38
DDX39A-201ENST00000242776 KIF22Q14807 665 aa17.44■□□□□ 0.38
DDX39A-201ENST00000242776 CHRDL2Q6WN34 429 aa17.44■□□□□ 0.38
DDX39A-201ENST00000242776 WRNIP1Q96S55 665 aa17.44■□□□□ 0.38
DDX39A-201ENST00000242776 BTBD19C9JJ37 291 aa17.44■□□□□ 0.38
DDX39A-201ENST00000242776 GRM8O00222 908 aa17.44■□□□□ 0.38
DDX39A-201ENST00000242776 VAMP4O75379 141 aa17.44■□□□□ 0.38
DDX39A-201ENST00000242776 FRAT2O75474 233 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-201ENST00000242776 SLC4A10Q6U841 1118 aa17.44■□□□□ 0.38
DDX39A-201ENST00000242776 VPS37DQ86XT2 251 aa17.44■□□□□ 0.38
DDX39A-201ENST00000242776 C9orf78Q9NZ63 289 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-201ENST00000242776 SNCAIPQ9Y6H5 919 aa17.44■□□□□ 0.38
DDX39A-201ENST00000242776 WDHD1O75717 1129 aaPredicted RBP17.43■□□□□ 0.38
DDX39A-201ENST00000242776 LACTBP83111 547 aaPredicted RBP17.43■□□□□ 0.38
DDX39A-201ENST00000242776 MTFR1Q15390 333 aa17.43■□□□□ 0.38
DDX39A-201ENST00000242776 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
DDX39A-201ENST00000242776 DPF3Q92784 378 aa17.43■□□□□ 0.38
DDX39A-201ENST00000242776 CPA4Q9UI42 421 aa17.43■□□□□ 0.38
DDX39A-201ENST00000242776 SPDYE5A6NIY4 337 aa17.42■□□□□ 0.38
DDX39A-201ENST00000242776 IRF6O14896 467 aa17.42■□□□□ 0.38
DDX39A-201ENST00000242776 TLR2O60603 784 aa17.42■□□□□ 0.38
DDX39A-201ENST00000242776 CETPP11597 493 aa17.42■□□□□ 0.38
DDX39A-201ENST00000242776 UBE4AQ14139 1066 aa17.42■□□□□ 0.38
DDX39A-201ENST00000242776 CCDC27Q2M243 656 aa17.41■□□□□ 0.38
DDX39A-201ENST00000242776 MIGA2Q7L4E1 593 aa17.41■□□□□ 0.38
DDX39A-201ENST00000242776 SUCLG2Q96I99 432 aa17.41■□□□□ 0.38
DDX39A-201ENST00000242776 CTGFP29279 349 aa17.4■□□□□ 0.38
DDX39A-201ENST00000242776 SNAPC2Q13487 334 aa17.4■□□□□ 0.38
DDX39A-201ENST00000242776 ERO1BQ86YB8 467 aa17.4■□□□□ 0.38
DDX39A-201ENST00000242776 TMOD2Q9NZR1 351 aa17.4■□□□□ 0.38
DDX39A-201ENST00000242776 IL16Q14005 1332 aa17.39■□□□□ 0.37
DDX39A-201ENST00000242776 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.39■□□□□ 0.37
DDX39A-201ENST00000242776 TEKT1Q969V4 418 aa17.39■□□□□ 0.37
DDX39A-201ENST00000242776 PSMC4P43686 418 aa17.38■□□□□ 0.37
DDX39A-201ENST00000242776 LRRC24Q50LG9 513 aa17.38■□□□□ 0.37
DDX39A-201ENST00000242776 SHISA4Q96DD7 197 aa17.38■□□□□ 0.37
DDX39A-201ENST00000242776 SPINK5Q9NQ38 1064 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-201ENST00000242776 RBM27Q9P2N5 1060 aaKnown RBP17.38■□□□□ 0.37
DDX39A-201ENST00000242776 BIN2Q9UBW5 565 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-201ENST00000242776 SZT2Q5T011 3432 aa17.38■□□□□ 0.37
DDX39A-201ENST00000242776 MYH13Q9UKX3 1938 aa17.38■□□□□ 0.37
DDX39A-201ENST00000242776 FMNL1O95466 1100 aaPredicted RBP17.37■□□□□ 0.37
DDX39A-201ENST00000242776 INPP5BP32019 993 aa17.37■□□□□ 0.37
DDX39A-201ENST00000242776 METTL24Q5JXM2 366 aa17.37■□□□□ 0.37
DDX39A-201ENST00000242776 RAET1EQ8TD07 263 aa17.37■□□□□ 0.37
DDX39A-201ENST00000242776 TRIM47Q96LD4 638 aa17.37■□□□□ 0.37
DDX39A-201ENST00000242776 BCAMP50895 628 aa17.37■□□□□ 0.37
DDX39A-201ENST00000242776 PPIL2Q13356 520 aa17.37■□□□□ 0.37
DDX39A-201ENST00000242776 CAVIN4Q5BKX8 364 aa17.37■□□□□ 0.37
DDX39A-201ENST00000242776 FBXO33Q7Z6M2 555 aa17.37■□□□□ 0.37
DDX39A-201ENST00000242776 KAZALD1Q96I82 304 aa17.37■□□□□ 0.37
DDX39A-201ENST00000242776 SRCIN1Q9C0H9 1055 aa17.37■□□□□ 0.37
DDX39A-201ENST00000242776 RIPOR2Q9Y4F9 1068 aa17.37■□□□□ 0.37
DDX39A-201ENST00000242776 MROH5Q6ZUA9 1318 aa17.36■□□□□ 0.37
DDX39A-201ENST00000242776 MGAMO43451 1857 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms