RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 GDF9O60383 454 aa11.89□□□□□ -0.51
TTC1-201ENST00000231238 CD2BP2O95400 341 aaKnown RBP11.89□□□□□ -0.51
TTC1-201ENST00000231238 MFAP1P55081 439 aaKnown RBP11.89□□□□□ -0.51
TTC1-201ENST00000231238 TRAPPC3LQ5T215 181 aa11.89□□□□□ -0.51
TTC1-201ENST00000231238 CLEC4GQ6UXB4 293 aa11.89□□□□□ -0.51
TTC1-201ENST00000231238 ZNF34Q8IZ26 560 aa11.89□□□□□ -0.51
TTC1-201ENST00000231238 RILPL2Q969X0 211 aa11.89□□□□□ -0.51
TTC1-201ENST00000231238 COPRSQ9NQ92 184 aa11.89□□□□□ -0.51
TTC1-201ENST00000231238 CICQ96RK0 1608 aaPredicted RBP11.89□□□□□ -0.51
TTC1-201ENST00000231238 PDE8AO60658 829 aa11.89□□□□□ -0.51
TTC1-201ENST00000231238 APBA3O96018 575 aa11.89□□□□□ -0.51
TTC1-201ENST00000231238 CCNYL3P0C7X3 344 aa11.89□□□□□ -0.51
TTC1-201ENST00000231238 TRIM32Q13049 653 aa11.89□□□□□ -0.51
TTC1-201ENST00000231238 TSHZ3Q63HK5 1081 aa11.89□□□□□ -0.51
TTC1-201ENST00000231238 LYPD8Q6UX82 237 aa11.89□□□□□ -0.51
TTC1-201ENST00000231238 EVA1BQ9NVM1 165 aa11.89□□□□□ -0.51
TTC1-201ENST00000231238 PKD2L1Q9P0L9 805 aa11.89□□□□□ -0.51
TTC1-201ENST00000231238 ZNF831Q5JPB2 1677 aa11.88□□□□□ -0.51
TTC1-201ENST00000231238 AOX1Q06278 1338 aa11.88□□□□□ -0.51
TTC1-201ENST00000231238 UBN2Q6ZU65 1347 aa11.88□□□□□ -0.51
TTC1-201ENST00000231238 ANKRD18BA2A2Z9 1011 aa11.88□□□□□ -0.51
TTC1-201ENST00000231238 CTSWP56202 376 aa11.88□□□□□ -0.51
TTC1-201ENST00000231238 PTPN12Q05209 780 aaKnown RBP11.88□□□□□ -0.51
TTC1-201ENST00000231238 SUSD4Q5VX71 490 aa11.88□□□□□ -0.51
TTC1-201ENST00000231238 USPL1Q5W0Q7 1092 aa11.88□□□□□ -0.51
TTC1-201ENST00000231238 SETDB2Q96T68 719 aa11.88□□□□□ -0.51
TTC1-201ENST00000231238 PLA2G12BQ9BX93 195 aa11.88□□□□□ -0.51
TTC1-201ENST00000231238 OSBPL3Q9H4L5 887 aa11.88□□□□□ -0.51
TTC1-201ENST00000231238 NARFQ9UHQ1 456 aa11.88□□□□□ -0.51
TTC1-201ENST00000231238 COL5A3P25940 1745 aaPredicted RBP11.87□□□□□ -0.51
TTC1-201ENST00000231238 GSPT1P15170 499 aaKnown RBP11.87□□□□□ -0.51
TTC1-201ENST00000231238 SDSP20132 328 aa11.87□□□□□ -0.51
TTC1-201ENST00000231238 IL15P40933 162 aaPredicted RBP11.87□□□□□ -0.51
TTC1-201ENST00000231238 NYXQ9GZU5 481 aa11.87□□□□□ -0.51
TTC1-201ENST00000231238 STAP2Q9UGK3 403 aa11.87□□□□□ -0.51
TTC1-201ENST00000231238 TTC41PQ6P2S7 1318 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 BRWD3Q6RI45 1802 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 SBF2Q86WG5 1849 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 EYA2O00167 538 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 GLRX3O76003 335 aaKnown RBP11.86□□□□□ -0.51
TTC1-201ENST00000231238 HCLS1P14317 486 aaPredicted RBP11.86□□□□□ -0.51
TTC1-201ENST00000231238 ITGA6P23229 1130 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 RFX5P48382 616 aaPredicted RBP11.86□□□□□ -0.51
TTC1-201ENST00000231238 TFCP2Q12800 502 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 CCDC152Q4G0S7 254 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 SMIM5Q71RC9 77 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 CNTROBQ8N137 903 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 SYNE4Q8N205 404 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 ZNF594Q96JF6 807 aaPredicted RBP11.86□□□□□ -0.51
TTC1-201ENST00000231238 NEUROD6Q96NK8 337 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 CCDC8Q9H0W5 538 aaPredicted RBP11.86□□□□□ -0.51
TTC1-201ENST00000231238 CNNM1Q9NRU3 951 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 ECHDC1Q9NTX5 307 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 CEP126Q9P2H0 1117 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 SRP68Q9UHB9 627 aaKnown RBP11.86□□□□□ -0.51
TTC1-201ENST00000231238 RREB1Q92766 1687 aa11.86□□□□□ -0.51
TTC1-201ENST00000231238 ANKRD36CQ5JPF3 1778 aa11.85□□□□□ -0.51
TTC1-201ENST00000231238 TNFRSF10AO00220 468 aa11.85□□□□□ -0.51
TTC1-201ENST00000231238 SASH1O94885 1247 aa11.85□□□□□ -0.51
TTC1-201ENST00000231238 TXNRD1Q16881 649 aa11.85□□□□□ -0.51
TTC1-201ENST00000231238 GORABQ5T7V8 394 aa11.85□□□□□ -0.51
TTC1-201ENST00000231238 TBC1D9Q6ZT07 1266 aa11.85□□□□□ -0.51
TTC1-201ENST00000231238 NBPF5PQ86XG9 351 aaPredicted RBP11.85□□□□□ -0.51
TTC1-201ENST00000231238 NUP98P52948 1817 aa11.85□□□□□ -0.51
TTC1-201ENST00000231238 MYH14Q7Z406 1995 aaKnown RBP11.85□□□□□ -0.51
TTC1-201ENST00000231238 NRG2O14511 850 aaPredicted RBP11.84□□□□□ -0.51
TTC1-201ENST00000231238 CIAO1O76071 339 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 CSF1RP07333 972 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 SKOR1P84550 965 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 PRR20EP86478 221 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 PRR20CP86479 221 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 PRR20DP86480 221 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 PRR20BP86481 221 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 PRR20AP86496 221 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 KCNH2Q12809 1159 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 FOXC1Q12948 553 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 TNNI3KQ59H18 835 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 METTL24Q5JXM2 366 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 LDHAL6AQ6ZMR3 332 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 TTLL11Q8NHH1 800 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 TSC1Q92574 1164 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 GREM2Q9H772 168 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 LRRC4BQ9NT99 713 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 FPGT-TNNI3KV9GXZ4 949 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 SALL3Q9BXA9 1300 aa11.84□□□□□ -0.51
TTC1-201ENST00000231238 NTSR2O95665 410 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 MAP4K4O95819 1239 aaPredicted RBP11.83□□□□□ -0.52
TTC1-201ENST00000231238 IGHMBP2P38935 993 aaKnown RBP11.83□□□□□ -0.52
TTC1-201ENST00000231238 SF3B2Q13435 895 aaKnown RBP11.83□□□□□ -0.52
TTC1-201ENST00000231238 TBC1D9BQ66K14 1250 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 POTEAQ6S8J7 498 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 TPTE2Q6XPS3 522 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 EAF2Q96CJ1 260 aaPredicted RBP11.83□□□□□ -0.52
TTC1-201ENST00000231238 MPHOSPH8Q99549 860 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 GOPCQ9HD26 462 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 TFCP2L1Q9NZI6 479 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 AKAP2Q9Y2D5 859 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 LY75O60449 1722 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
TTC1-201ENST00000231238 SSFA2P28290 1259 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms