RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 PTPDC1A2A3K4 754 aa13.21□□□□□ -0.3
DNMT3B-201ENST00000201963 CALRP27797 417 aaKnown RBP13.21□□□□□ -0.3
DNMT3B-201ENST00000201963 EPS15P42566 896 aa13.21□□□□□ -0.3
DNMT3B-201ENST00000201963 CRKLP46109 303 aaKnown RBP13.21□□□□□ -0.3
DNMT3B-201ENST00000201963 FAM160A1Q05DH4 1040 aa13.21□□□□□ -0.3
DNMT3B-201ENST00000201963 APOBRQ0VD83 1088 aa13.21□□□□□ -0.3
DNMT3B-201ENST00000201963 MICU3Q86XE3 530 aa13.21□□□□□ -0.3
DNMT3B-201ENST00000201963 IQSEC3Q9UPP2 1182 aaPredicted RBP13.21□□□□□ -0.3
DNMT3B-201ENST00000201963 SPATA31A5Q5VU36 1347 aa13.2□□□□□ -0.3
DNMT3B-201ENST00000201963 SPATA31A7Q8IWB4 1347 aa13.2□□□□□ -0.3
DNMT3B-201ENST00000201963 CPSF1Q10570 1443 aaKnown RBP13.2□□□□□ -0.3
DNMT3B-201ENST00000201963 KLF18A0A0U1RQI7 1052 aa13.2□□□□□ -0.3
DNMT3B-201ENST00000201963 NR1I2O75469 434 aa13.2□□□□□ -0.3
DNMT3B-201ENST00000201963 EZH2Q15910 746 aaKnown RBP13.2□□□□□ -0.3
DNMT3B-201ENST00000201963 SRP68Q9UHB9 627 aaKnown RBP13.2□□□□□ -0.3
DNMT3B-201ENST00000201963 CUL4AQ13619 759 aa13.2□□□□□ -0.3
DNMT3B-201ENST00000201963 CACTINQ8WUQ7 758 aaKnown RBP13.2□□□□□ -0.3
DNMT3B-201ENST00000201963 KIF2CQ99661 725 aa13.2□□□□□ -0.3
DNMT3B-201ENST00000201963 CRB1P82279 1406 aa13.2□□□□□ -0.3
DNMT3B-201ENST00000201963 MATR3P43243 847 aaKnown RBP eCLIP13.2□□□□□ -0.3
DNMT3B-201ENST00000201963 ME3Q16798 604 aa13.2□□□□□ -0.3
DNMT3B-201ENST00000201963 TTC41PQ6P2S7 1318 aa13.2□□□□□ -0.3
DNMT3B-201ENST00000201963 PALLDQ8WX93 1383 aa13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 ZNF213O14771 459 aa13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 JAK2O60674 1132 aa13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 MCM3P25205 808 aa13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 MYO5BQ9ULV0 1848 aa13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 CCDC175P0C221 793 aa13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 OAS2P29728 719 aaKnown RBP13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 LDHAL6AQ6ZMR3 332 aa13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 HELBQ8NG08 1087 aaPredicted RBP13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 ZNF526Q8TF50 670 aaPredicted RBP13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 FAM227BQ96M60 508 aa13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 TANGO6Q9C0B7 1094 aa13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 NAA30Q147X3 362 aaPredicted RBP13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 N4BP3O15049 544 aa13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 ZSCAN26Q16670 478 aa13.19□□□□□ -0.3
DNMT3B-201ENST00000201963 SIGLEC1Q9BZZ2 1709 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 CHL1O00533 1208 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 TTLL7Q6ZT98 887 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 RASEFQ8IZ41 740 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 ZDHHC9Q9Y397 364 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.18□□□□□ -0.32e-8■■□□□ 12.1
DNMT3B-201ENST00000201963 UBR1Q8IWV7 1749 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 RIMBP2O15034 1052 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 YEATS4O95619 227 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 IARSP41252 1262 aaKnown RBP13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 LRRC8AQ8IWT6 810 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 WASF1Q92558 559 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 UBAC1Q9BSL1 405 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 TDO2P48775 406 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 SPA17Q15506 151 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 ZNF569Q5MCW4 686 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
DNMT3B-201ENST00000201963 CEP131Q9UPN4 1083 aa13.17□□□□□ -0.3
DNMT3B-201ENST00000201963 JAG2Q9Y219 1238 aa13.17□□□□□ -0.3
DNMT3B-201ENST00000201963 SLC27A2O14975 620 aa13.17□□□□□ -0.3
DNMT3B-201ENST00000201963 BAG1Q99933 345 aaPredicted RBP13.17□□□□□ -0.3
DNMT3B-201ENST00000201963 NACAP1Q9BZK3 213 aa13.17□□□□□ -0.3
DNMT3B-201ENST00000201963 JADE2Q9NQC1 790 aa13.17□□□□□ -0.3
DNMT3B-201ENST00000201963 MRVI1Q9Y6F6 885 aa13.17□□□□□ -0.3
DNMT3B-201ENST00000201963 TRPM1Q7Z4N2 1603 aa13.17□□□□□ -0.3
DNMT3B-201ENST00000201963 DCCP43146 1447 aa13.17□□□□□ -0.3
DNMT3B-201ENST00000201963 GOLGA8AA7E2F4 631 aa13.17□□□□□ -0.3
DNMT3B-201ENST00000201963 RPS6KB1P23443 525 aa13.17□□□□□ -0.3
DNMT3B-201ENST00000201963 CEP112Q8N8E3 955 aa13.17□□□□□ -0.3
DNMT3B-201ENST00000201963 XPO4Q9C0E2 1151 aaKnown RBP13.17□□□□□ -0.3
DNMT3B-201ENST00000201963 SSH2Q76I76 1423 aa13.17□□□□□ -0.3
DNMT3B-201ENST00000201963 PAFAH1B1P43034 410 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 FANCCQ00597 558 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 MYL5Q02045 173 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 NCBP1Q09161 790 aaKnown RBP13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 SMC1AQ14683 1233 aaKnown RBP13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 RBM26Q5T8P6 1007 aaKnown RBP13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 CLEC17AQ6ZS10 378 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 TAX1BP1Q86VP1 789 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 DDX21Q9NR30 783 aaKnown RBP eCLIP13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 ANKRD18BA2A2Z9 1011 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 CTAGE9A4FU28 777 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 MCMDC2Q4G0Z9 681 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 ALG1Q9BT22 464 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 NCOA5Q9HCD5 579 aaKnown RBP13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 LUC7LQ9NQ29 371 aaKnown RBP13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 NCOA3Q9Y6Q9 1424 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 IRS4O14654 1257 aaPredicted RBP13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 OTUD7BQ6GQQ9 843 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 LMBR1LQ6UX01 489 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 AIDAQ96BJ3 306 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 RGS12O14924 1447 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 EBAG9O00559 213 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 AFMP43652 599 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 STX17P56962 302 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 EIF4A1P60842 406 aaKnown RBP13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 DNAJC21Q5F1R6 531 aaKnown RBP13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 NBPF11Q86T75 865 aa13.16□□□□□ -0.3
DNMT3B-201ENST00000201963 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
DNMT3B-201ENST00000201963 WDHD1O75717 1129 aaPredicted RBP13.15□□□□□ -0.3
DNMT3B-201ENST00000201963 MMP10P09238 476 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms