RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 SOGA3Q5TF21 947 aa26.32■■□□□ 1.8
HOXC8-201ENST00000040584 VPS53Q5VIR6 699 aa26.32■■□□□ 1.8
HOXC8-201ENST00000040584 ZGPATQ8N5A5 531 aaKnown RBP26.32■■□□□ 1.8
HOXC8-201ENST00000040584 ZNF384Q8TF68 577 aa26.32■■□□□ 1.8
HOXC8-201ENST00000040584 MAP4K1Q92918 833 aa26.32■■□□□ 1.8
HOXC8-201ENST00000040584 BCS1LQ9Y276 419 aa26.32■■□□□ 1.8
HOXC8-201ENST00000040584 CYP7A1P22680 504 aa26.32■■□□□ 1.8
HOXC8-201ENST00000040584 SPRYD3Q8NCJ5 442 aa26.32■■□□□ 1.8
HOXC8-201ENST00000040584 PSMD1Q99460 953 aa26.32■■□□□ 1.8
HOXC8-201ENST00000040584 GPAA1O43292 621 aa26.31■■□□□ 1.8
HOXC8-201ENST00000040584 MECOMQ03112 1051 aa26.31■■□□□ 1.8
HOXC8-201ENST00000040584 KIAA2012Q0VF49 1180 aa26.31■■□□□ 1.8
HOXC8-201ENST00000040584 GRIK5Q16478 980 aa26.31■■□□□ 1.8
HOXC8-201ENST00000040584 SPTY2D1Q68D10 685 aaPredicted RBP26.31■■□□□ 1.8
HOXC8-201ENST00000040584 NSUN4Q96CB9 384 aaKnown RBP26.31■■□□□ 1.8
HOXC8-201ENST00000040584 PALD1Q9ULE6 856 aa26.31■■□□□ 1.8
HOXC8-201ENST00000040584 FAM205AQ6ZU69 1335 aa26.3■■□□□ 1.8
HOXC8-201ENST00000040584 PPIP5K2O43314 1243 aa26.3■■□□□ 1.8
HOXC8-201ENST00000040584 NAA16Q6N069 864 aaPredicted RBP26.3■■□□□ 1.8
HOXC8-201ENST00000040584 ADGRA1Q86SQ6 560 aa26.3■■□□□ 1.8
HOXC8-201ENST00000040584 FBXW7Q969H0 707 aa26.3■■□□□ 1.8
HOXC8-201ENST00000040584 IL17RAQ96F46 866 aa26.3■■□□□ 1.8
HOXC8-201ENST00000040584 RBM8AQ9Y5S9 174 aaKnown RBP26.3■■□□□ 1.8
HOXC8-201ENST00000040584 LDHBP07195 334 aaKnown RBP26.3■■□□□ 1.8
HOXC8-201ENST00000040584 ANAPC15P60006 121 aa26.3■■□□□ 1.8
HOXC8-201ENST00000040584 PODNQ7Z5L7 613 aa26.3■■□□□ 1.8
HOXC8-201ENST00000040584 ZNF277Q9NRM2 450 aaPredicted RBP26.3■■□□□ 1.8
HOXC8-201ENST00000040584 ECE2O60344 883 aa26.29■■□□□ 1.8
HOXC8-201ENST00000040584 HSPD1P10809 573 aaKnown RBP26.29■■□□□ 1.8
HOXC8-201ENST00000040584 MFSD14BQ5SR56 506 aa26.29■■□□□ 1.8
HOXC8-201ENST00000040584 FHDC1Q9C0D6 1143 aaPredicted RBP26.29■■□□□ 1.8
HOXC8-201ENST00000040584 KCNQ5Q9NR82 932 aa26.29■■□□□ 1.8
HOXC8-201ENST00000040584 K7ELQ4 463 aaPredicted RBP26.28■■□□□ 1.8
HOXC8-201ENST00000040584 TTLL5Q6EMB2 1281 aa26.28■■□□□ 1.8
HOXC8-201ENST00000040584 MIGA1Q8NAN2 632 aa26.28■■□□□ 1.8
HOXC8-201ENST00000040584 AIDAQ96BJ3 306 aa26.28■■□□□ 1.8
HOXC8-201ENST00000040584 NECTIN1Q15223 517 aa26.28■■□□□ 1.8
HOXC8-201ENST00000040584 RABEP1Q15276 862 aa26.28■■□□□ 1.8
HOXC8-201ENST00000040584 DZIP1Q86YF9 867 aaKnown RBP26.28■■□□□ 1.8
HOXC8-201ENST00000040584 TBC1D22AQ8WUA7 517 aa26.28■■□□□ 1.8
HOXC8-201ENST00000040584 MBD4O95243 580 aa26.27■■□□□ 1.8
HOXC8-201ENST00000040584 STRBPQ96SI9 672 aaKnown RBP26.26■■□□□ 1.79
HOXC8-201ENST00000040584 DSCC1Q9BVC3 393 aa26.26■■□□□ 1.79
HOXC8-201ENST00000040584 ARMT1Q9H993 441 aa26.26■■□□□ 1.79
HOXC8-201ENST00000040584 FOXP2O15409 715 aa26.25■■□□□ 1.79
HOXC8-201ENST00000040584 KCNB2Q92953 911 aa26.25■■□□□ 1.79
HOXC8-201ENST00000040584 GBP4Q96PP9 640 aa26.25■■□□□ 1.79
HOXC8-201ENST00000040584 MXD3Q9BW11 206 aa26.25■■□□□ 1.79
HOXC8-201ENST00000040584 HSP90AA1P07900 732 aaKnown RBP26.25■■□□□ 1.79
HOXC8-201ENST00000040584 RASEFQ8IZ41 740 aa26.25■■□□□ 1.79
HOXC8-201ENST00000040584 LCORLQ8N3X6 602 aa26.25■■□□□ 1.79
HOXC8-201ENST00000040584 IL27Q8NEV9 243 aa26.25■■□□□ 1.79
HOXC8-201ENST00000040584 SRCAPQ6ZRS2 3230 aa26.24■■□□□ 1.79
HOXC8-201ENST00000040584 CCDC88AQ3V6T2 1871 aa26.24■■□□□ 1.79
HOXC8-201ENST00000040584 CREB3L3Q68CJ9 461 aa26.24■■□□□ 1.79
HOXC8-201ENST00000040584 LARGE2Q8N3Y3 721 aa26.24■■□□□ 1.79
HOXC8-201ENST00000040584 U3KPZ7 1027 aaPredicted RBP26.24■■□□□ 1.79
HOXC8-201ENST00000040584 MAGEB6P1A0A0J9YX57 407 aa26.23■■□□□ 1.79
HOXC8-201ENST00000040584 CERS5Q8N5B7 392 aa26.23■■□□□ 1.79
HOXC8-201ENST00000040584 SNX14Q9Y5W7 946 aa26.23■■□□□ 1.79
HOXC8-201ENST00000040584 SLC27A2O14975 620 aa26.23■■□□□ 1.79
HOXC8-201ENST00000040584 TRAK2O60296 914 aa26.23■■□□□ 1.79
HOXC8-201ENST00000040584 DIXDC1Q155Q3 683 aa26.23■■□□□ 1.79
HOXC8-201ENST00000040584 TAOK3Q9H2K8 898 aa26.23■■□□□ 1.79
HOXC8-201ENST00000040584 ISY1Q9ULR0 285 aaKnown RBP26.23■■□□□ 1.79
HOXC8-201ENST00000040584 NFKBIEO00221 500 aa26.22■■□□□ 1.79
HOXC8-201ENST00000040584 DYNLL1P63167 89 aaKnown RBP26.22■■□□□ 1.79
HOXC8-201ENST00000040584 RAB3GAP1Q15042 981 aa26.22■■□□□ 1.79
HOXC8-201ENST00000040584 SKOR2Q2VWA4 1001 aaPredicted RBP26.22■■□□□ 1.79
HOXC8-201ENST00000040584 BRPF3Q9ULD4 1205 aa26.22■■□□□ 1.79
HOXC8-201ENST00000040584 MAST2Q6P0Q8 1798 aa26.22■■□□□ 1.79
HOXC8-201ENST00000040584 SCN9AQ15858 1988 aa26.22■■□□□ 1.79
HOXC8-201ENST00000040584 YDJCA8MPS7 323 aa26.21■■□□□ 1.79
HOXC8-201ENST00000040584 IGSF3O75054 1194 aa26.21■■□□□ 1.79
HOXC8-201ENST00000040584 RIOK1Q9BRS2 568 aaKnown RBP26.21■■□□□ 1.79
HOXC8-201ENST00000040584 VPS33BQ9H267 617 aa26.21■■□□□ 1.79
HOXC8-201ENST00000040584 FER1L6Q2WGJ9 1857 aa26.21■■□□□ 1.79
HOXC8-201ENST00000040584 IARSP41252 1262 aaKnown RBP26.21■■□□□ 1.79
HOXC8-201ENST00000040584 GSTO1P78417 241 aa26.21■■□□□ 1.79
HOXC8-201ENST00000040584 STRIP1Q5VSL9 837 aa26.21■■□□□ 1.79
HOXC8-201ENST00000040584 TMED8Q6PL24 325 aaPredicted RBP26.21■■□□□ 1.79
HOXC8-201ENST00000040584 COL4A5P29400 1685 aa26.21■■□□□ 1.79
HOXC8-201ENST00000040584 USP17L3A6NCW0 530 aa26.2■■□□□ 1.78
HOXC8-201ENST00000040584 USP17L4A6NCW7 530 aa26.2■■□□□ 1.78
HOXC8-201ENST00000040584 PRKAB2O43741 272 aa26.2■■□□□ 1.78
HOXC8-201ENST00000040584 APPP05067 770 aa26.2■■□□□ 1.78
HOXC8-201ENST00000040584 USP17L1Q7RTZ2 530 aa26.2■■□□□ 1.78
HOXC8-201ENST00000040584 SYT17Q9BSW7 474 aa26.2■■□□□ 1.78
HOXC8-201ENST00000040584 AATFQ9NY61 560 aaKnown RBP eCLIP26.2■■□□□ 1.78
HOXC8-201ENST00000040584 TAF6LQ9Y6J9 622 aa26.2■■□□□ 1.78
HOXC8-201ENST00000040584 F8W031 263 aaPredicted RBP26.19■■□□□ 1.78
HOXC8-201ENST00000040584 FGAP02671 866 aa26.19■■□□□ 1.78
HOXC8-201ENST00000040584 RNF20Q5VTR2 975 aa26.19■■□□□ 1.78
HOXC8-201ENST00000040584 ZKSCAN1P17029 563 aaPredicted RBP26.19■■□□□ 1.78
HOXC8-201ENST00000040584 DACT2Q5SW24 774 aa26.19■■□□□ 1.78
HOXC8-201ENST00000040584 SUGT1Q9Y2Z0 365 aa26.19■■□□□ 1.78
HOXC8-201ENST00000040584 SLC4A4Q9Y6R1 1079 aa26.19■■□□□ 1.78
HOXC8-201ENST00000040584 GOLGA6L3A6NEY3 463 aa26.18■■□□□ 1.78
HOXC8-201ENST00000040584 PATL2C9JE40 543 aaKnown RBP26.18■■□□□ 1.78
HOXC8-201ENST00000040584 CYP21A2P08686 494 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms