RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Klhl10Q9D5V2 608 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Naa16Q9DBB4 864 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Hip1rQ9JKY5 1068 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Usp42B2RQC2 1324 aaKnown RBP10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Prr16A3KMN5 304 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Ptgs1P22437 602 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 ItpripQ3TNL8 555 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Morc2aQ69ZX6 1030 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Klhl30Q8C3F7 581 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 DpydQ8CHR6 1025 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Ints5Q8CHT3 1018 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Snw1Q9CSN1 536 aaKnown RBP10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Flt4P35917 1363 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Prr5lA2AVJ5 370 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Pcdhb9E9Q5G2 828 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Nap1l1P28656 391 aaKnown RBP10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Rad23bP54728 416 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Erich4Q3UNU4 136 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Tpm4Q6IRU2 248 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Tbc1d5Q80XQ2 815 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Atad2Q8CDM1 1040 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Polr2dQ9D7M8 142 aaKnown RBP10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Osbpl5Q9ER64 874 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Foxo3Q9WVH4 672 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Ktn1Q61595 1327 aaKnown RBP10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Pcdhb22Q91XZ8 794 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Chaf1aQ9QWF0 911 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Suclg2Q9Z2I8 433 aa10.98□□□□□ -0.65
Trim9-201ENSMUST00000110520 Adamts7Q68SA9 1657 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 1700029H14RikE9PY36 240 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Ampd3O08739 766 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Clec11aO88200 328 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Usp5P56399 858 aaKnown RBP10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Psmb7P70195 277 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Cnnm2Q3TWN3 875 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Eme2Q56A04 373 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Ankrd13dQ6PD24 605 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Sptlc3Q8BG54 563 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 CenpqQ9CPQ5 267 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Prl3d1P18121 224 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Uri1Q3TLD5 531 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 L1td1Q587J6 782 aaKnown RBP10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Ubxn10Q8BG34 277 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Dnaaf4Q8R368 420 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Krt23Q99PS0 422 aa10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Sec62Q8BU14 398 aaKnown RBP10.97□□□□□ -0.65
Trim9-201ENSMUST00000110520 Cyp3a57D3YYZ0 503 aa10.96□□□□□ -0.65
Trim9-201ENSMUST00000110520 Mtx1P47802 317 aa10.96□□□□□ -0.65
Trim9-201ENSMUST00000110520 Arid5bQ8BM75 1188 aaKnown RBP10.96□□□□□ -0.65
Trim9-201ENSMUST00000110520 Phf23Q8BSN5 401 aa10.96□□□□□ -0.65
Trim9-201ENSMUST00000110520 Ccdc43Q9CR29 222 aaKnown RBP10.96□□□□□ -0.65
Trim9-201ENSMUST00000110520 Gm20425E9Q035 978 aaKnown RBP10.96□□□□□ -0.65
Trim9-201ENSMUST00000110520 Oas2E9Q9A9 742 aa10.96□□□□□ -0.65
Trim9-201ENSMUST00000110520 SrprbP47758 269 aa10.96□□□□□ -0.65
Trim9-201ENSMUST00000110520 Traf3ip1Q149C2 625 aa10.96□□□□□ -0.65
Trim9-201ENSMUST00000110520 Atg9aQ68FE2 551 aa10.96□□□□□ -0.65
Trim9-201ENSMUST00000110520 Q8BZJ8 459 aa10.96□□□□□ -0.65
Trim9-201ENSMUST00000110520 Nod2Q8K3Z0 1020 aa10.96□□□□□ -0.65
Trim9-201ENSMUST00000110520 Nwd1A6H603 1563 aa10.96□□□□□ -0.66
Trim9-201ENSMUST00000110520 CebpaP53566 359 aa10.96□□□□□ -0.66
Trim9-201ENSMUST00000110520 Gng11P61953 73 aa10.96□□□□□ -0.66
Trim9-201ENSMUST00000110520 Bola3Q8CEI1 110 aa10.96□□□□□ -0.66
Trim9-201ENSMUST00000110520 Kcnh3Q9WVJ0 1095 aa10.96□□□□□ -0.66
Trim9-201ENSMUST00000110520 NktrP30415 1453 aa10.96□□□□□ -0.66
Trim9-201ENSMUST00000110520 Kansl3A2RSY1 903 aaKnown RBP10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Vmn2r23E9PXI5 849 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Eif6O55135 245 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Necab1Q8BG18 352 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 DlatQ8BMF4 642 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Ano2Q8CFW1 1002 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Cfap45Q9D9U9 551 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Pnpla7A2AJ88 1352 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Tbc1d4Q8BYJ6 1307 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Nfil3O08750 462 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Api5O35841 504 aaKnown RBP10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Pfkfb1P70266 471 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Gm28047Q3US59 414 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Cep131Q62036 1060 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Eaf2Q91ZD6 262 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Xpo4Q9ESJ0 1151 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Mdc1Q5PSV9 1707 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Npc1l1Q6T3U4 1333 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Slc4a1P04919 929 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Cyp4f39Q8BGU0 532 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Ehd2Q8BH64 543 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Slc13a4Q8BZ82 625 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Ginm1Q91WR6 327 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Cers3Q1A3B0 383 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Scaf1Q5U4C3 1256 aaKnown RBP10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Cnga2Q62398 664 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Luc7l2Q7TNC4 392 aaKnown RBP10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Ssfa2Q922B9 1252 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 Ccdc94Q9D6J3 314 aa10.95□□□□□ -0.66
Trim9-201ENSMUST00000110520 4930407I10RikD3Z5T8 1512 aa10.94□□□□□ -0.66
Trim9-201ENSMUST00000110520 Cyp2j7A0A140T8U1 504 aa10.94□□□□□ -0.66
Trim9-201ENSMUST00000110520 Plbd2Q3TCN2 594 aa10.94□□□□□ -0.66
Trim9-201ENSMUST00000110520 RragbQ6NTA4 374 aa10.94□□□□□ -0.66
Trim9-201ENSMUST00000110520 Msl1Q6PDM1 616 aa10.94□□□□□ -0.66
Trim9-201ENSMUST00000110520 Ctdspl2Q8BG15 465 aa10.94□□□□□ -0.66
Trim9-201ENSMUST00000110520 Usp44Q8C2S0 711 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms