RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 ErmnQ5EBJ4 281 aa20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Ccdc57Q6PHN1 1016 aa20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Gpr161B2RPY5 545 aa20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Apol7aB2RT54 418 aa20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Dnajc21E9Q8D0 531 aa20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Ranbp1P34022 203 aaKnown RBP20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Mcm5P49718 733 aa20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Vps54Q5SPW0 977 aa20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Col17a1Q07563 1470 aa20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Nup160Q9Z0W3 1402 aaKnown RBP20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Rpl13P47963 211 aaKnown RBP20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Ccdc89Q9DA73 370 aa20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Xpo4Q9ESJ0 1151 aa20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Hook2Q7TMK6 716 aa20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Dnajc10Q9DC23 793 aa20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Gbp2Q9Z0E6 589 aa20.09■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Ift20Q61025 132 aa20.08■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Usp19Q3UJD6 1360 aa20.08■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Ankrd35E9Q9D8 996 aa20.08■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Vwa3bJ9JI28 736 aa20.08■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Dydc2Q9D3X8 139 aa20.08■□□□□ 0.81
Col4a3bp-202ENSMUST00000109444 Fermt2Q8CIB5 680 aa20.08■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Tmem132aQ922P8 1018 aa20.08■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Ccdc105Q9D4K7 499 aa20.08■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Pak1O88643 545 aa20.07■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Snrpa1P57784 255 aaKnown RBP20.07■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Gys2Q8VCB3 704 aa20.07■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Mrpl12Q9DB15 201 aaKnown RBP20.07■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Trim6Q8BGE7 488 aa20.07■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Ublcp1Q8BGR9 318 aa20.07■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Xrcc4Q924T3 326 aa20.07■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Akap8Q9DBR0 687 aaKnown RBP20.07■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Map3k4O08648 1597 aa20.07■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 PparaP23204 468 aa20.07■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Znf18Q810A1 556 aa20.07■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Magi3Q9EQJ9 1476 aa20.07■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Eftud2O08810 971 aaKnown RBP20.06■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Ano9P86044 747 aa20.06■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Tekt3Q6X6Z7 490 aa20.06■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Rps6ka5Q8C050 863 aa20.06■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Arhgef11Q68FM7 1552 aa20.06■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Btn2a2A4QPC6 514 aa20.06■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 TsksO54887 585 aa20.06■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Chl1P70232 1209 aa20.06■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Csrnp2Q8BGQ2 534 aa20.06■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 9230110C19RikQ8CC70 267 aa20.06■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Ccpg1Q640L3 753 aa20.06■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Mtx1P47802 317 aa20.05■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Tbc1d31Q6NXY1 996 aa20.05■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Lamc1P02468 1607 aaKnown RBP20.05■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Clasp1Q80TV8 1535 aaKnown RBP20.05■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Znf394Q9Z1D9 521 aa20.05■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Q4VA45 678 aa20.05■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Rbm17Q8JZX4 405 aaKnown RBP20.05■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Ribc1Q9D0B8 379 aa20.05■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 4930548H24RikQ9D496 437 aa20.05■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 AU022751B1B0V2 589 aa20.04■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Fermt1P59113 677 aa20.04■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Gucy1a3Q9ERL9 691 aa20.04■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Tbc1d2B1AVH7 922 aa20.04■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Exoc3l2D3YUP5 789 aa20.04■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 L1td1Q587J6 782 aaKnown RBP20.04■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Rbm12b2Q66JV4 834 aaKnown RBP20.04■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Frat2Q8K025 231 aa20.04■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Ufl1Q8CCJ3 793 aaKnown RBP20.04■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Rsrc1Q9DBU6 334 aa20.04■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Sept3Q9Z1S5 350 aa20.04■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Map3k9Q3U1V8 1077 aa20.04■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Nom1Q3UFM5 854 aaKnown RBP20.04■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Ndufab1Q9CR21 156 aa20.04■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Abcc1O35379 1528 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Cbfa2t2O70374 594 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Csrnp1P59054 583 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Pla2g4fQ50L41 855 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Sec62Q8BU14 398 aaKnown RBP20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Polr2dQ9D7M8 142 aaKnown RBP20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Sept6Q9R1T4 434 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Clip2Q9Z0H8 1047 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Atp8a2P98200 1148 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Gm5935Q497S0 212 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Ccnl1Q52KE7 532 aaKnown RBP20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 MmeQ61391 750 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Rab3il1Q8VDV3 383 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 PzpQ61838 1495 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 KaznQ69ZS8 779 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Zfpm1O35615 995 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Aimp1P31230 310 aaKnown RBP20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Nlrp1aQ2LKU9 1182 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 MycbpapQ5SUV2 932 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Paip2Q9D6V8 124 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Klhl40Q9D783 621 aa20.03■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Mcm7Q61881 719 aaKnown RBP20.02■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Capn2O08529 700 aa20.02■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Fchsd1Q6PFY1 688 aa20.02■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Lrrc8aQ80WG5 810 aa20.02■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Depdc1bQ8BH88 529 aa20.02■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Ptcd1Q8C2E4 695 aaKnown RBP20.02■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Pak2Q8CIN4 524 aa20.02■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Hdac9Q99N13 588 aa20.02■□□□□ 0.8
Col4a3bp-202ENSMUST00000109444 Palm3A2TJV2 734 aa20.02■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms