RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 OR8G2PQ6IF36 304 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 TEX43Q6ZNM6 134 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 FAM122AQ96E09 287 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 CIB3Q96Q77 187 aaPredicted RBP7.35□□□□□ -1.23
VCL-207ENST00000624354 AGMATQ9BSE5 352 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 TRAV39A0A0B4J263 110 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 ZNF503-AS2A6NEH8 195 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 FAM90A26D6RGX4 464 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 SS18L1O75177 396 aaPredicted RBP7.34□□□□□ -1.23
VCL-207ENST00000624354 KBTBD11O94819 623 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 CLDN1O95832 211 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 IGLV2-14P01704 120 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 DUSP3P51452 185 aaPredicted RBP7.34□□□□□ -1.23
VCL-207ENST00000624354 ATP6V1FQ16864 119 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 RPP25LQ8N5L8 163 aaKnown RBP7.34□□□□□ -1.23
VCL-207ENST00000624354 RPUSD4Q96CM3 377 aaKnown RBP7.34□□□□□ -1.23
VCL-207ENST00000624354 PKIBQ9C010 78 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 GSX1Q9H4S2 264 aaPredicted RBP7.34□□□□□ -1.23
VCL-207ENST00000624354 PILRBQ9UKJ0 227 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 ATMQ13315 3056 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 TMEM250H0YL14 139 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 K7EP13 123 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 M0R296 226 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 RHBDL1O75783 438 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 CD33P20138 364 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 RPL23P62829 140 aaKnown RBP7.34□□□□□ -1.23
VCL-207ENST00000624354 KCNIP4Q6PIL6 250 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 SMIM15Q7Z3B0 74 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 FGFRL1Q8N441 504 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 ORAOV1Q8WV07 137 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 APH1AQ96BI3 265 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 STRADBQ9C0K7 418 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 TIMM9Q9Y5J7 89 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 TRAPPC1Q9Y5R8 145 aa7.34□□□□□ -1.23
VCL-207ENST00000624354 RNF212BA8MTL3 300 aa7.34□□□□□ -1.24
VCL-207ENST00000624354 C3orf80F5H4A9 247 aa7.34□□□□□ -1.24
VCL-207ENST00000624354 J3QT63 122 aa7.34□□□□□ -1.24
VCL-207ENST00000624354 LILRA1O75019 489 aa7.34□□□□□ -1.24
VCL-207ENST00000624354 TYMSP04818 313 aa7.34□□□□□ -1.24
VCL-207ENST00000624354 SERPINA7P05543 415 aa7.34□□□□□ -1.24
VCL-207ENST00000624354 CA6P23280 308 aa7.34□□□□□ -1.24
VCL-207ENST00000624354 RTP5Q14D33 572 aa7.34□□□□□ -1.24
VCL-207ENST00000624354 PMS2CLQ68D20 193 aa7.34□□□□□ -1.24
VCL-207ENST00000624354 SPINK14Q6IE38 97 aa7.34□□□□□ -1.24
VCL-207ENST00000624354 CMTM2Q8TAZ6 248 aa7.34□□□□□ -1.24
VCL-207ENST00000624354 UBALD1Q8TB05 177 aa7.34□□□□□ -1.24
VCL-207ENST00000624354 ANAPC16Q96DE5 110 aa7.34□□□□□ -1.24
VCL-207ENST00000624354 ALKBH7Q9BT30 221 aaPredicted RBP7.34□□□□□ -1.24
VCL-207ENST00000624354 ZZEF1O43149 2961 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 A0A1B0GUS0 222 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 CBY3A6NI87 242 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 SIRPB1O00241 398 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 NUPR1O60356 82 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 IGKV1D-33P01593 117 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 IGKV1-33P01594 117 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 OR5G3P0C626 314 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 SRP14P37108 136 aaKnown RBP7.33□□□□□ -1.24
VCL-207ENST00000624354 MMDQ15546 238 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 TMEM14EPQ6UXP3 125 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.33□□□□□ -1.24
VCL-207ENST00000624354 CENPVQ7Z7K6 275 aaPredicted RBP7.33□□□□□ -1.24
VCL-207ENST00000624354 OR1L6Q8NGR2 347 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 SLC25A22Q9H936 323 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 B4GALT7Q9UBV7 327 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 PPIAL4AQ9Y536 164 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 ANKRD11Q6UB99 2663 aaPredicted RBP7.33□□□□□ -1.24
VCL-207ENST00000624354 CTXND1A0A1B0GTU2 59 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 A0A1W2PR80 420 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 HMGB3O15347 200 aaKnown RBP7.33□□□□□ -1.24
VCL-207ENST00000624354 LHX2P50458 406 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 TPPP2P59282 170 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 TPTE2P1Q5T6R2 138 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 Q6P435 159 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 DRAM1Q8N682 238 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 VN1R17PQ8TDU5 208 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 PARLQ9H300 379 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 COL6A6A6NMZ7 2263 aa7.33□□□□□ -1.24
VCL-207ENST00000624354 A0A1W2PN81 502 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 CHRNA7P36544 502 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 UBE2NP61088 152 aaKnown RBP7.32□□□□□ -1.24
VCL-207ENST00000624354 UBE2V1Q13404 147 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 MSMO1Q15800 293 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 ZNF497Q6ZNH5 498 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 MRGPRDQ8TDS7 321 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 FAM173AQ9BQD7 235 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 MANBALQ9NQG1 85 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 A0A0U1RQK1 487 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 ZNF320A2RRD8 509 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 YPEL1O60688 119 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 NDUFB8O95169 186 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 OR2H2O95918 312 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 GCH1P30793 250 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 CLDN18P56856 261 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 PAFAH1B2P68402 229 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 DCAF12Q5T6F0 453 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 ACSM6Q6P461 480 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 MCEMP1Q8IX19 187 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 STPG4Q8N801 248 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 OR10G9Q8NGN4 311 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 OR10G7Q8NGN6 311 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms