RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 LOXP28300 417 aaPredicted RBP2.82□□□□□ -1.96
LIG4-205ENST00000614526 RPL23AP62750 156 aaKnown RBP2.82□□□□□ -1.96
LIG4-205ENST00000614526 ZNF383Q8NA42 475 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 CLEC18CQ8NCF0 446 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 OR10X1Q8NGY0 326 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 OR2G3Q8NGZ4 309 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 FAM213BQ8TBF2 198 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 LRRC20Q8TCA0 184 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 ITLN2Q8WWU7 325 aaPredicted RBP2.82□□□□□ -1.96
LIG4-205ENST00000614526 BBC3Q96PG8 261 aaPredicted RBP2.82□□□□□ -1.96
LIG4-205ENST00000614526 RSG1Q9BU20 258 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 TREM1Q9NP99 234 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 LYRM2Q9NU23 88 aaPredicted RBP2.82□□□□□ -1.96
LIG4-205ENST00000614526 MMP24Q9Y5R2 645 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 RAB29O14966 203 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 GPR37O15354 613 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 ENSAO43768 121 aaKnown RBP2.82□□□□□ -1.96
LIG4-205ENST00000614526 SNAPC5O75971 98 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 DEFA4P12838 97 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 CAMLGP49069 296 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 CEBPGP53567 150 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 ARF6P62330 175 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 DEFA5Q01523 94 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 TNFRSF9Q07011 255 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 EIF4EBP1Q13541 118 aaPredicted RBP2.82□□□□□ -1.96
LIG4-205ENST00000614526 FBXL19-AS1Q494R0 122 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 C1QTNF12Q5T7M4 302 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 GPR157Q5UAW9 335 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 TRAT1Q6PIZ9 186 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 STX12Q86Y82 276 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 ABHD12Q8N2K0 398 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 LILRB2Q8N423 598 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 BPIFCQ8NFQ6 507 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 OR4A16Q8NH70 328 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 STOML3Q8TAV4 291 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 RHOVQ96L33 236 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 HSD17B10Q99714 261 aaKnown RBP2.82□□□□□ -1.96
LIG4-205ENST00000614526 MRPL20Q9BYC9 149 aaKnown RBP2.82□□□□□ -1.96
LIG4-205ENST00000614526 SLC25A31Q9H0C2 315 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 BARX1Q9HBU1 254 aaPredicted RBP2.82□□□□□ -1.96
LIG4-205ENST00000614526 LPAR2Q9HBW0 351 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 SIRT7Q9NRC8 400 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.82□□□□□ -1.96
LIG4-205ENST00000614526 ZFP57Q9NU63 452 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 ONECUT1Q9UBC0 465 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 RPUSD1Q9UJJ7 312 aaKnown RBP2.82□□□□□ -1.96
LIG4-205ENST00000614526 NUP50Q9UKX7 468 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 PRELID3BQ9Y3B1 194 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 HCFC1P51610 2035 aa2.82□□□□□ -1.96
LIG4-205ENST00000614526 USP9YO00507 2555 aaPredicted RBP2.82□□□□□ -1.96
LIG4-205ENST00000614526 UBE2L5PA0A1B0GUS4 154 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 A1L4Q6 167 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 SMCO3A2RU48 225 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 ZNF729A6NN14 1252 aaPredicted RBP2.81□□□□□ -1.96
LIG4-205ENST00000614526 SRRM4A7MD48 611 aaKnown RBP2.81□□□□□ -1.96
LIG4-205ENST00000614526 TOR1AO14656 332 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 TAAR5O14804 337 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 WNT2P09544 360 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 CT45A6P0DMU7 189 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 CT45A5P0DMU8 189 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 CT45A7P0DMV0 189 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 DAOP14920 347 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 M6PRP20645 277 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 CD24P25063 80 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 ELLP55199 621 aaPredicted RBP2.81□□□□□ -1.96
LIG4-205ENST00000614526 EFNB3Q15768 340 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 MSMO1Q15800 293 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 HAPLN4Q86UW8 402 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 ZBTB34Q8NCN2 500 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 DTD1Q8TEA8 209 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 IL22RA2Q969J5 263 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 LSM10Q969L4 123 aaKnown RBP2.81□□□□□ -1.96
LIG4-205ENST00000614526 MARC2Q969Z3 335 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 ZNF251Q9BRH9 671 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 RAB1BQ9H0U4 201 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 C11orf1Q9H5F2 150 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 TMEM140Q9NV12 185 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 LPAR3Q9UBY5 353 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 LINC00312Q9Y6C7 94 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 CELSR2Q9HCU4 2923 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 ABCA12Q86UK0 2595 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.81□□□□□ -1.96
LIG4-205ENST00000614526 DUXBA0A1W2PPF3 345 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 SHOXO15266 292 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 IFNA10P01566 189 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 ERVK-16P61578 105 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 CR1LQ2VPA4 569 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 MIDNQ504T8 468 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 C4orf17Q53FE4 359 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 ATRAIDQ6UW56 229 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 ZNF66Q6ZN08 573 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 UBAC2Q8NBM4 344 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 NRGNQ92686 78 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 PHYHIPLQ96FC7 376 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 RITA1Q96K30 269 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 OR4C12Q96R67 309 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 RAB40CQ96S21 281 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 CLCC1Q96S66 551 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 GAL3ST2Q9H3Q3 398 aa2.81□□□□□ -1.96
LIG4-205ENST00000614526 VSIRQ9H7M9 311 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms