RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CPNE2Q96FN4 548 aaPredicted RBP2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 C4orf36Q96KX1 117 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 LINC00574Q9H8X3 128 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 ELL3Q9HB65 397 aaPredicted RBP2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 HMG20AQ9NP66 347 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 RAB18Q9NP72 206 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 SMPD3Q9NY59 655 aaPredicted RBP2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 TAS2R3Q9NYW6 316 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 DHRS4-AS1Q9P1J3 65 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 GLS2Q9UI32 602 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 MINOS1-NBL1R4GNA1 71 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 TGP01266 2768 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 IGKV1-12A0A0C4DH73 117 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF729A6NN14 1252 aaPredicted RBP2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 OOSP1A8MZH6 123 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 H3BUX3 64 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 SH2D1BO14796 132 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 ANGPTL7O43827 346 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 KBTBD11O94819 623 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR2H2O95918 312 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 IGKV1D-12P01611 117 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 IGLV1-47P01700 117 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 CD2P06729 351 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 KRTAP1-4P0C5Y4 121 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 PRKACAP17612 351 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 IGFBP3P17936 291 aaPredicted RBP2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 RAB3AP20336 220 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 OMGP23515 440 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 POU3F4P49335 361 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 CEBPDP49716 269 aaPredicted RBP2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 DLX1P56177 255 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 EDDM3BP56851 147 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 MED21Q13503 144 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 CDK5R1Q15078 307 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 KISS1Q15726 138 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 GRK1Q15835 563 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 LDLRAD2Q5SZI1 272 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 ATAD3CQ5T2N8 411 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 LINC00242Q5T6M2 205 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 DMKNQ6E0U4 476 aaPredicted RBP2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 ASPHD2Q6ICH7 369 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 Q6P435 159 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 CD164L2Q6UWJ8 174 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 HEPN1Q6WQI6 88 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 TMPRSS11AQ6ZMR5 421 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 KCTD9Q7L273 389 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 CDH26Q8IXH8 852 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 PDZD9Q8IXQ8 264 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 Q8N2B8 174 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 PNKDQ8N490 385 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 DHRSXQ8N5I4 330 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 ASCC1Q8N9N2 400 aaKnown RBP2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR4S1Q8NGB4 309 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR4M1Q8NGD0 313 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR10A7Q8NGE5 316 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR13C9Q8NGT0 318 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR13D1Q8NGV5 346 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR52N1Q8NH53 320 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 THRSPQ92748 146 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 STMN2Q93045 179 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 CREB3L1Q96BA8 519 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 SMIM19Q96E16 107 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF714Q96N38 554 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 PDCD1LG2Q9BQ51 273 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 TMEM133Q9H2Q1 129 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 GAL3ST2Q9H3Q3 398 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 ISG20L2Q9H9L3 353 aaKnown RBP2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 AMBNQ9NP70 447 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 EXOSC4Q9NPD3 245 aaKnown RBP2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 TMEM138Q9NPI0 162 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 RBFOX1Q9NWB1 397 aaKnown RBP2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 BABAM2Q9NXR7 383 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 TECRQ9NZ01 308 aaKnown RBP2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 IL36GQ9NZH8 169 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 CNOT2Q9NZN8 540 aaKnown RBP2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 PITPNC1Q9UKF7 332 aa2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 DIMT1Q9UNQ2 313 aaKnown RBP2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 EXOSC1Q9Y3B2 195 aaKnown RBP2.67□□□□□ -1.98
CKS1BP3-201ENST00000600888 TRGV10A0A0A0MS01 117 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 IGHV2-26A0A0B4J1V2 119 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 KBTBD11-OT1A0A1B0GTJ5 212 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 A0A1W2PRD5 423 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 A0A1W2PRF3 423 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 A0A1W2PRM7 423 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 ODAMA1E959 279 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 A6NDX4 124 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 EFCAB10A6NFE3 127 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 A8MU10 97 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 H0YJX3 145 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 H3BSH0 61 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 GABRPO00591 440 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 DEGS1O15121 323 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 MAGEB3O15480 346 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF780AO75290 641 aaPredicted RBP2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF253O75346 499 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 LALBAP00709 142 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 ARG1P05089 322 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 GLAP06280 429 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 OCM2P0CE71 109 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 OCMP0CE72 109 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms