RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 NOTCH1P46531 2555 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 FCGR3BO75015 233 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 IGLV2-23P01705 113 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 ZNF182P17025 639 aaPredicted RBP12.62□□□□□ -0.39
COMMD4-206ENST00000562610 ELK1P19419 428 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 PSMB8P28062 276 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 SLC6A1P30531 599 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 LGALS7P47929 136 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 DEFB136Q30KP8 78 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 SAMD5Q5TGI4 173 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 ETV3LQ6ZN32 361 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 PPP1R27Q86WC6 154 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 SNX29P2Q8IUI4 249 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 RNF152Q8N8N0 203 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 ARPC1AQ92747 370 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 DCUN1D5Q9BTE7 237 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 TAS2R8Q9NYW2 309 aa12.62□□□□□ -0.39
COMMD4-206ENST00000562610 NOL3O60936 208 aaKnown RBP12.61□□□□□ -0.39
COMMD4-206ENST00000562610 CNIH1O95406 144 aa12.61□□□□□ -0.39
COMMD4-206ENST00000562610 IGLV2-14P01704 120 aa12.61□□□□□ -0.39
COMMD4-206ENST00000562610 PPIFP30405 207 aaKnown RBP12.61□□□□□ -0.39
COMMD4-206ENST00000562610 HERV-K104P61576 105 aa12.61□□□□□ -0.39
COMMD4-206ENST00000562610 RPL30P62888 115 aaKnown RBP12.61□□□□□ -0.39
COMMD4-206ENST00000562610 TMEM267Q0VDI3 215 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-206ENST00000562610 VMA21Q3ZAQ7 101 aa12.61□□□□□ -0.39
COMMD4-206ENST00000562610 OXLD1Q5BKU9 147 aa12.61□□□□□ -0.39
COMMD4-206ENST00000562610 UNQ5815/PRO19632Q6UWF5 114 aa12.61□□□□□ -0.39
COMMD4-206ENST00000562610 ZNF562Q6V9R5 426 aa12.61□□□□□ -0.39
COMMD4-206ENST00000562610 TMEM17Q86X19 198 aa12.61□□□□□ -0.39
COMMD4-206ENST00000562610 TCTEX1D1Q8N7M0 179 aa12.61□□□□□ -0.39
COMMD4-206ENST00000562610 OR5H2Q8NGV7 314 aa12.61□□□□□ -0.39
COMMD4-206ENST00000562610 DUX3Q96PT4 197 aa12.61□□□□□ -0.39
COMMD4-206ENST00000562610 HSD17B10Q99714 261 aaKnown RBP12.61□□□□□ -0.39
COMMD4-206ENST00000562610 SLC5A7Q9GZV3 580 aa12.61□□□□□ -0.39
COMMD4-206ENST00000562610 CCL28Q9NRJ3 127 aa12.61□□□□□ -0.39
COMMD4-206ENST00000562610 FOXA2Q9Y261 457 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-206ENST00000562610 TNFSF12O43508 249 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 PMP2P02689 132 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 IGLL1P15814 213 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 CDX1P47902 265 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-206ENST00000562610 CRIP2P52943 208 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-206ENST00000562610 RAB25P57735 213 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 TAS2R46P59540 309 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 PJVKQ0ZLH3 352 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 FXYD3Q14802 87 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 SPCS2Q15005 226 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 BEAN1Q3B7T3 259 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 ACTBL2Q562R1 376 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 RNASE12Q5GAN4 147 aaKnown RBP12.6□□□□□ -0.39
COMMD4-206ENST00000562610 IDO2Q6ZQW0 420 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 OVCH2Q7RTZ1 564 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 MRPL41Q8IXM3 137 aaKnown RBP12.6□□□□□ -0.39
COMMD4-206ENST00000562610 LINC00482Q8N8I6 264 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 OSR1Q8TAX0 266 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-206ENST00000562610 RAB2BQ8WUD1 216 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 GPHA2Q96T91 129 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 ANAPC10Q9UM13 185 aa12.6□□□□□ -0.39
COMMD4-206ENST00000562610 SRRM4A7MD48 611 aaKnown RBP12.59□□□□□ -0.39
COMMD4-206ENST00000562610 ARPC1BO15143 372 aaKnown RBP12.59□□□□□ -0.39
COMMD4-206ENST00000562610 WIPF1O43516 503 aa12.59□□□□□ -0.39
COMMD4-206ENST00000562610 IGLV1-40P01703 118 aa12.59□□□□□ -0.39
COMMD4-206ENST00000562610 RFX2P48378 723 aa12.59□□□□□ -0.39
COMMD4-206ENST00000562610 C19orf54Q5BKX5 351 aa12.59□□□□□ -0.39
COMMD4-206ENST00000562610 ZNF66Q6ZN08 573 aa12.59□□□□□ -0.39
COMMD4-206ENST00000562610 MINDY2Q8NBR6 621 aa12.59□□□□□ -0.39
COMMD4-206ENST00000562610 LFNGQ8NES3 379 aa12.59□□□□□ -0.39
COMMD4-206ENST00000562610 OR4S2Q8NH73 311 aa12.59□□□□□ -0.39
COMMD4-206ENST00000562610 CASTOR1Q8WTX7 329 aa12.59□□□□□ -0.39
COMMD4-206ENST00000562610 C4orf3Q8WVX3 66 aa12.59□□□□□ -0.39
COMMD4-206ENST00000562610 RAX2Q96IS3 184 aa12.59□□□□□ -0.39
COMMD4-206ENST00000562610 KLK15Q9H2R5 256 aa12.59□□□□□ -0.39
COMMD4-206ENST00000562610 SCPEP1Q9HB40 452 aa12.59□□□□□ -0.39
COMMD4-206ENST00000562610 EXTL2Q9UBQ6 330 aa12.59□□□□□ -0.39
COMMD4-206ENST00000562610 TNCP24821 2201 aa12.58□□□□□ -0.39
COMMD4-206ENST00000562610 CCL24O00175 119 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 RGS5O15539 181 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 SOX15O60248 233 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 CRYGBP07316 175 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 SAA1P0DJI8 122 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-206ENST00000562610 EGR2P11161 476 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-206ENST00000562610 NAT1P18440 290 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 HLA-DMAP28067 261 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 HRH1P35367 487 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 MYCNOSP40205 109 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 RPL5P46777 297 aaKnown RBP12.58□□□□□ -0.4
COMMD4-206ENST00000562610 UBE2KP61086 200 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 MSMO1Q15800 293 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 TNXAQ16473 311 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 MFSD4AQ8N468 514 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 WFDC9Q8NEX5 89 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 GPX8Q8TED1 209 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 GIMAP1Q8WWP7 306 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 RCC1LQ96I51 464 aaKnown RBP12.58□□□□□ -0.4
COMMD4-206ENST00000562610 OR5B12Q96R08 314 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 ZNF2Q9BSG1 426 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-206ENST00000562610 NUBP2Q9Y5Y2 271 aa12.58□□□□□ -0.4
COMMD4-206ENST00000562610 NOTCH3Q9UM47 2321 aa12.57□□□□□ -0.4
COMMD4-206ENST00000562610 CD40LGP29965 261 aa12.57□□□□□ -0.4
COMMD4-206ENST00000562610 RCVRNP35243 200 aa12.57□□□□□ -0.4
COMMD4-206ENST00000562610 RAB9AP51151 201 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms