RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 TRGC1P0CF51 173 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 ALDH3A1P30838 453 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 CDK10Q15131 360 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 STK38Q15208 465 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 BSXQ3C1V8 233 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 C6orf183Q5T699 404 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 PDPK2PQ6A1A2 396 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 TTC33Q6PID6 262 aaPredicted RBP-0.48□□□□□ -2.49
CASC4-211ENST00000561305 MRPL52Q86TS9 123 aaKnown RBP-0.48□□□□□ -2.49
CASC4-211ENST00000561305 C1orf158Q8N1D5 194 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 OR4C6Q8NH72 309 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 PPWD1Q96BP3 646 aaKnown RBP-0.48□□□□□ -2.49
CASC4-211ENST00000561305 CPNE2Q96FN4 548 aaPredicted RBP-0.48□□□□□ -2.49
CASC4-211ENST00000561305 PLAC8Q9NZF1 115 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 CLEC2DQ9UHP7 191 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 PSME2Q9UL46 239 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 SNX24Q9Y343 169 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 TRAV38-1A0A0B4J264 116 aa-0.49□□□□□ -2.49
CASC4-211ENST00000561305 OR10A3P58181 314 aa-0.49□□□□□ -2.49
CASC4-211ENST00000561305 FXYD7P58549 80 aa-0.49□□□□□ -2.49
CASC4-211ENST00000561305 KRTAP6-1Q3LI64 71 aa-0.49□□□□□ -2.49
CASC4-211ENST00000561305 OR13C8Q8NGS7 320 aa-0.49□□□□□ -2.49
CASC4-211ENST00000561305 EIF5A2Q9GZV4 153 aaKnown RBP-0.49□□□□□ -2.49
CASC4-211ENST00000561305 CHST6Q9GZX3 395 aa-0.49□□□□□ -2.49
CASC4-211ENST00000561305 CREBL2O60519 120 aaPredicted RBP-0.5□□□□□ -2.49
CASC4-211ENST00000561305 RPL28P46779 137 aaKnown RBP-0.5□□□□□ -2.49
CASC4-211ENST00000561305 HERVK_113P63121 156 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 BTN3A2P78410 334 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 RUNX1Q01196 453 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 VAMP3Q15836 100 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 HNRNPA1L2Q32P51 320 aaKnown RBP-0.5□□□□□ -2.49
CASC4-211ENST00000561305 ACSM3Q53FZ2 586 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 ZNF321PQ8N8H1 164 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 ASB13Q8WXK3 278 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 CATSPER2Q96P56 530 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 NMNAT3Q96T66 252 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 SERPINI1Q99574 410 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 COMMD9Q9P000 198 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 ZFP30Q9Y2G7 519 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 IGSF10Q6WRI0 2623 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 SYNRGQ9UMZ2 1314 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 KIF27Q86VH2 1401 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 STRCQ7RTU9 1775 aa-0.5□□□□□ -2.49
CASC4-211ENST00000561305 A0A1B0GX12 115 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 A0A1W2PPM0 123 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 ITGB1BP1O14713 200 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 MPZL2O60487 215 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 STAG3L2P0CL84 134 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 RAB14P61106 215 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 C1DQ13901 141 aaKnown RBP-0.51□□□□□ -2.49
CASC4-211ENST00000561305 NPATQ14207 1427 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 OR10J3Q5JRS4 329 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 C1orf174Q8IYL3 243 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 LRRC34Q8IZ02 419 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 NATD1Q8N6N6 113 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 OR8B3Q8NGG8 313 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 OR52K2Q8NGK3 314 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 AQP3Q92482 292 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 ABCC12Q96J65 1359 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 OR7D2Q96RA2 312 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 UGT2B28Q9BY64 529 aa-0.51□□□□□ -2.49
CASC4-211ENST00000561305 GOLGA6L7A0A1B0GV03 622 aa-0.52□□□□□ -2.49
CASC4-211ENST00000561305 H3BT86 120 aa-0.52□□□□□ -2.49
CASC4-211ENST00000561305 MRASO14807 208 aa-0.52□□□□□ -2.49
CASC4-211ENST00000561305 ATP8B1O43520 1251 aa-0.52□□□□□ -2.49
CASC4-211ENST00000561305 AP1S1P61966 158 aa-0.52□□□□□ -2.49
CASC4-211ENST00000561305 TBPL1P62380 186 aa-0.52□□□□□ -2.49
CASC4-211ENST00000561305 NKAIN1Q4KMZ8 207 aa-0.52□□□□□ -2.49
CASC4-211ENST00000561305 C17orf78Q8N4C9 275 aa-0.52□□□□□ -2.49
CASC4-211ENST00000561305 PDCL2Q8N4E4 241 aa-0.52□□□□□ -2.49
CASC4-211ENST00000561305 RPP25LQ8N5L8 163 aaKnown RBP-0.52□□□□□ -2.49
CASC4-211ENST00000561305 PACRGLQ8N7B6 248 aa-0.52□□□□□ -2.49
CASC4-211ENST00000561305 IFT81Q8WYA0 676 aa-0.52□□□□□ -2.49
CASC4-211ENST00000561305 AMELYQ99218 206 aa-0.52□□□□□ -2.49
CASC4-211ENST00000561305 MAT2BQ9NZL9 334 aa-0.52□□□□□ -2.49
CASC4-211ENST00000561305 THSD7AQ9UPZ6 1657 aa-0.53□□□□□ -2.49
CASC4-211ENST00000561305 UGT2B11O75310 529 aa-0.53□□□□□ -2.49
CASC4-211ENST00000561305 PPBPP02775 128 aa-0.53□□□□□ -2.49
CASC4-211ENST00000561305 CDK9P50750 372 aaKnown RBP-0.53□□□□□ -2.49
CASC4-211ENST00000561305 SNAP25P60880 206 aa-0.53□□□□□ -2.49
CASC4-211ENST00000561305 MESTQ5EB52 335 aa-0.53□□□□□ -2.49
CASC4-211ENST00000561305 C9orf64Q5T6V5 341 aa-0.53□□□□□ -2.49
CASC4-211ENST00000561305 CDRT4Q8N9R6 151 aa-0.53□□□□□ -2.49
CASC4-211ENST00000561305 OR5AC2Q9NZP5 309 aa-0.53□□□□□ -2.49
CASC4-211ENST00000561305 NXT1Q9UKK6 140 aaKnown RBP-0.53□□□□□ -2.49
CASC4-211ENST00000561305 MED12Q93074 2177 aa-0.54□□□□□ -2.5
CASC4-211ENST00000561305 TRAV14DV4A0A0A6YYC5 116 aa-0.54□□□□□ -2.5
CASC4-211ENST00000561305 TMEM212A6NML5 194 aa-0.54□□□□□ -2.5
CASC4-211ENST00000561305 TRAPPC2LH3BP13 241 aa-0.54□□□□□ -2.5
CASC4-211ENST00000561305 AGTR1P30556 359 aa-0.54□□□□□ -2.5
CASC4-211ENST00000561305 FAM27BQ5VT28 67 aa-0.54□□□□□ -2.5
CASC4-211ENST00000561305 ATP5L2Q7Z4Y8 100 aa-0.54□□□□□ -2.5
CASC4-211ENST00000561305 DHFR2Q86XF0 187 aa-0.54□□□□□ -2.5
CASC4-211ENST00000561305 BAP18Q8IXM2 172 aa-0.54□□□□□ -2.5
CASC4-211ENST00000561305 TESCQ96BS2 214 aa-0.54□□□□□ -2.5
CASC4-211ENST00000561305 TMEM70Q9BUB7 260 aa-0.54□□□□□ -2.5
CASC4-211ENST00000561305 COL4A5P29400 1685 aa-0.54□□□□□ -2.5
CASC4-211ENST00000561305 NUP160Q12769 1436 aa-0.55□□□□□ -2.5
CASC4-211ENST00000561305 HRNRQ86YZ3 2850 aaPredicted RBP-0.55□□□□□ -2.5
CASC4-211ENST00000561305 H0YC42 278 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms