RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 TMEM68Q96MH6 324 aa10.9□□□□□ -0.66
SNX6-210ENST00000557341 ELOVL1Q9BW60 279 aa10.9□□□□□ -0.66
SNX6-210ENST00000557341 ZNF230Q9UIE0 474 aaPredicted RBP10.9□□□□□ -0.66
SNX6-210ENST00000557341 RAB26Q9ULW5 256 aa10.9□□□□□ -0.66
SNX6-210ENST00000557341 HUWE1Q7Z6Z7 4374 aaKnown RBP10.89□□□□□ -0.67
SNX6-210ENST00000557341 A0A0B4J203 849 aa10.89□□□□□ -0.67
SNX6-210ENST00000557341 CRYGBP07316 175 aa10.89□□□□□ -0.67
SNX6-210ENST00000557341 PJVKQ0ZLH3 352 aa10.89□□□□□ -0.67
SNX6-210ENST00000557341 BVESQ8NE79 360 aa10.89□□□□□ -0.67
SNX6-210ENST00000557341 OR5T1Q8NG75 326 aa10.89□□□□□ -0.67
SNX6-210ENST00000557341 ATG5Q9H1Y0 275 aa10.89□□□□□ -0.67
SNX6-210ENST00000557341 RANGRFQ9HD47 186 aaPredicted RBP10.89□□□□□ -0.67
SNX6-210ENST00000557341 STUB1Q9UNE7 303 aa10.89□□□□□ -0.67
SNX6-210ENST00000557341 MRPS14O60783 128 aaKnown RBP10.88□□□□□ -0.67
SNX6-210ENST00000557341 FRMD6-AS1P0C7T7 363 aa10.88□□□□□ -0.67
SNX6-210ENST00000557341 DTYMKP23919 212 aa10.88□□□□□ -0.67
SNX6-210ENST00000557341 VMA21Q3ZAQ7 101 aa10.88□□□□□ -0.67
SNX6-210ENST00000557341 NR2C2APQ86WQ0 139 aa10.88□□□□□ -0.67
SNX6-210ENST00000557341 H1FOOQ8IZA3 346 aaPredicted RBP10.88□□□□□ -0.67
SNX6-210ENST00000557341 DDB2Q92466 427 aa10.88□□□□□ -0.67
SNX6-210ENST00000557341 PHB2Q99623 299 aa10.88□□□□□ -0.67
SNX6-210ENST00000557341 RSRP1Q9BUV0 290 aa10.88□□□□□ -0.67
SNX6-210ENST00000557341 DNAH7Q8WXX0 4024 aa10.87□□□□□ -0.67
SNX6-210ENST00000557341 SMIM30A4D0T7 59 aa10.87□□□□□ -0.67
SNX6-210ENST00000557341 ANKRD34BA5PLL1 514 aa10.87□□□□□ -0.67
SNX6-210ENST00000557341 BRI3O95415 125 aa10.87□□□□□ -0.67
SNX6-210ENST00000557341 CRYZL1O95825 349 aa10.87□□□□□ -0.67
SNX6-210ENST00000557341 AADACP22760 399 aa10.87□□□□□ -0.67
SNX6-210ENST00000557341 DUTP33316 252 aaKnown RBP10.87□□□□□ -0.67
SNX6-210ENST00000557341 UBE2KP61086 200 aa10.87□□□□□ -0.67
SNX6-210ENST00000557341 OVCH2Q7RTZ1 564 aa10.87□□□□□ -0.67
SNX6-210ENST00000557341 ANKRD13BQ86YJ7 626 aa10.87□□□□□ -0.67
SNX6-210ENST00000557341 SBSPONQ8IVN8 264 aa10.87□□□□□ -0.67
SNX6-210ENST00000557341 OSR1Q8TAX0 266 aaPredicted RBP10.87□□□□□ -0.67
SNX6-210ENST00000557341 RCHY1Q96PM5 261 aa10.87□□□□□ -0.67
SNX6-210ENST00000557341 TINAGL1Q9GZM7 467 aaPredicted RBP10.87□□□□□ -0.67
SNX6-210ENST00000557341 COA4Q9NYJ1 87 aa10.87□□□□□ -0.67
SNX6-210ENST00000557341 IGKV1D-8A0A087WSZ0 117 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 TRIM64CA6NLI5 447 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 SRRM4A7MD48 611 aaKnown RBP10.86□□□□□ -0.67
SNX6-210ENST00000557341 LINC00473A8K010 186 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 NOTOA8MTQ0 251 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 C3orf84H3BNL1 204 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 CREBL2O60519 120 aaPredicted RBP10.86□□□□□ -0.67
SNX6-210ENST00000557341 SCGNO76038 276 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 IGLV1-51P01701 117 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 PSMB9P28065 219 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 FGF9P31371 208 aaPredicted RBP10.86□□□□□ -0.67
SNX6-210ENST00000557341 DEFA5Q01523 94 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 TNXAQ16473 311 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 UBE2UQ5VVX9 321 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 IDO2Q6ZQW0 420 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 HAPLN4Q86UW8 402 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 ZNF645Q8N7E2 425 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 TEX45Q8NA69 505 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 ACOT12Q8WYK0 555 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 FCGR1BQ92637 280 aa10.86□□□□□ -0.67
SNX6-210ENST00000557341 ELF5Q9UKW6 265 aaPredicted RBP10.86□□□□□ -0.67
SNX6-210ENST00000557341 MPPED1O15442 326 aa10.85□□□□□ -0.67
SNX6-210ENST00000557341 CTXN2P0C2S0 81 aa10.85□□□□□ -0.67
SNX6-210ENST00000557341 APELAP0DMC3 54 aa10.85□□□□□ -0.67
SNX6-210ENST00000557341 CD36P16671 472 aa10.85□□□□□ -0.67
SNX6-210ENST00000557341 PRSS8Q16651 343 aa10.85□□□□□ -0.67
SNX6-210ENST00000557341 MRGPRG-AS1Q2M3A8 158 aa10.85□□□□□ -0.67
SNX6-210ENST00000557341 HACD4Q5VWC8 232 aa10.85□□□□□ -0.67
SNX6-210ENST00000557341 KCTD9Q7L273 389 aa10.85□□□□□ -0.67
SNX6-210ENST00000557341 OR9G4Q8NGQ1 327 aa10.85□□□□□ -0.67
SNX6-210ENST00000557341 SRSF12Q8WXF0 261 aaKnown RBP10.85□□□□□ -0.67
SNX6-210ENST00000557341 USMG5Q96IX5 58 aa10.85□□□□□ -0.67
SNX6-210ENST00000557341 DCSTAMPQ9H295 470 aa10.85□□□□□ -0.67
SNX6-210ENST00000557341 ZMAT4Q9H898 229 aa10.85□□□□□ -0.67
SNX6-210ENST00000557341 TXNL4BQ9NX01 149 aaKnown RBP10.85□□□□□ -0.67
SNX6-210ENST00000557341 OR2W1Q9Y3N9 320 aa10.85□□□□□ -0.67
SNX6-210ENST00000557341 MSGN1A6NI15 193 aa10.84□□□□□ -0.67
SNX6-210ENST00000557341 ACTL6BO94805 426 aa10.84□□□□□ -0.67
SNX6-210ENST00000557341 OR9G9P0C7N8 305 aa10.84□□□□□ -0.67
SNX6-210ENST00000557341 SAA1P0DJI8 122 aaPredicted RBP10.84□□□□□ -0.67
SNX6-210ENST00000557341 DYRK1AQ13627 763 aa10.84□□□□□ -0.67
SNX6-210ENST00000557341 KLF5Q13887 457 aaPredicted RBP10.84□□□□□ -0.67
SNX6-210ENST00000557341 CDK10Q15131 360 aa10.84□□□□□ -0.67
SNX6-210ENST00000557341 CDNFQ49AH0 187 aa10.84□□□□□ -0.67
SNX6-210ENST00000557341 ZNF343Q6P1L6 599 aa10.84□□□□□ -0.67
SNX6-210ENST00000557341 TPRA1Q86W33 373 aa10.84□□□□□ -0.67
SNX6-210ENST00000557341 SPARTQ8N0X7 666 aa10.84□□□□□ -0.67
SNX6-210ENST00000557341 ADAD2Q8NCV1 583 aaKnown RBP10.84□□□□□ -0.67
SNX6-210ENST00000557341 NUDCD2Q8WVJ2 157 aa10.84□□□□□ -0.67
SNX6-210ENST00000557341 ST6GALNAC5Q9BVH7 336 aa10.84□□□□□ -0.67
SNX6-210ENST00000557341 PEF1Q9UBV8 284 aaKnown RBP10.84□□□□□ -0.67
SNX6-210ENST00000557341 DAPK2Q9UIK4 370 aa10.84□□□□□ -0.67
SNX6-210ENST00000557341 MRPS7Q9Y2R9 242 aaKnown RBP10.84□□□□□ -0.67
SNX6-210ENST00000557341 PRELID3BQ9Y3B1 194 aa10.84□□□□□ -0.67
SNX6-210ENST00000557341 TMEM235A6NFC5 223 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 J3QRK9 145 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 FCGR3BO75015 233 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 SLC22A5O76082 557 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 IGHV4-30-4P0DP06 118 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 NFYAP23511 347 aaPredicted RBP10.83□□□□□ -0.68
SNX6-210ENST00000557341 SYNJ2BPP57105 145 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 GNG2P59768 71 aa10.83□□□□□ -0.68
SNX6-210ENST00000557341 RPEL1Q2QD12 228 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms