RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 C4orf3Q8WVX3 66 aa15.97■□□□□ 0.15
VTI1B-205ENST00000555543 GNB4Q9HAV0 340 aa15.97■□□□□ 0.15
VTI1B-205ENST00000555543 A6NHS1 94 aa15.96■□□□□ 0.15
VTI1B-205ENST00000555543 LGALS7P47929 136 aa15.96■□□□□ 0.15
VTI1B-205ENST00000555543 TAS2R20P59543 309 aa15.96■□□□□ 0.15
VTI1B-205ENST00000555543 ARPC4P59998 168 aa15.96■□□□□ 0.15
VTI1B-205ENST00000555543 RPL30P62888 115 aaKnown RBP15.96■□□□□ 0.15
VTI1B-205ENST00000555543 TAGLNQ01995 201 aaKnown RBP15.96■□□□□ 0.15
VTI1B-205ENST00000555543 TMEM65Q6PI78 240 aa15.96■□□□□ 0.15
VTI1B-205ENST00000555543 PPP1R27Q86WC6 154 aa15.96■□□□□ 0.15
VTI1B-205ENST00000555543 ZNF491Q8N8L2 437 aa15.96■□□□□ 0.15
VTI1B-205ENST00000555543 S100A16Q96FQ6 103 aaKnown RBP15.96■□□□□ 0.15
VTI1B-205ENST00000555543 ADTRPQ96IZ2 230 aa15.96■□□□□ 0.15
VTI1B-205ENST00000555543 NECAP2Q9NVZ3 263 aa15.96■□□□□ 0.15
VTI1B-205ENST00000555543 FOXA2Q9Y261 457 aaPredicted RBP15.96■□□□□ 0.15
VTI1B-205ENST00000555543 RBMX2Q9Y388 322 aaKnown RBP15.96■□□□□ 0.15
VTI1B-205ENST00000555543 DPPA5A6NC42 116 aa15.95■□□□□ 0.14
VTI1B-205ENST00000555543 SHOXO15266 292 aa15.95■□□□□ 0.14
VTI1B-205ENST00000555543 GABARAPO95166 117 aa15.95■□□□□ 0.14
VTI1B-205ENST00000555543 CRYZL1O95825 349 aa15.95■□□□□ 0.14
VTI1B-205ENST00000555543 EIF4EP06730 217 aaKnown RBP15.95■□□□□ 0.14
VTI1B-205ENST00000555543 RRASP10301 218 aa15.95■□□□□ 0.14
VTI1B-205ENST00000555543 RAB9AP51151 201 aa15.95■□□□□ 0.14
VTI1B-205ENST00000555543 CBX3Q13185 183 aa15.95■□□□□ 0.14
VTI1B-205ENST00000555543 MRGPRG-AS1Q2M3A8 158 aa15.95■□□□□ 0.14
VTI1B-205ENST00000555543 LFNGQ8NES3 379 aa15.95■□□□□ 0.14
VTI1B-205ENST00000555543 GRPEL2Q8TAA5 225 aa15.95■□□□□ 0.14
VTI1B-205ENST00000555543 ARPC1AQ92747 370 aa15.95■□□□□ 0.14
VTI1B-205ENST00000555543 KCTD12Q96CX2 325 aaKnown RBP15.95■□□□□ 0.14
VTI1B-205ENST00000555543 AURKAIP1Q9NWT8 199 aaPredicted RBP15.95■□□□□ 0.14
VTI1B-205ENST00000555543 AADACP22760 399 aa15.94■□□□□ 0.14
VTI1B-205ENST00000555543 FCGR2CP31995 323 aa15.94■□□□□ 0.14
VTI1B-205ENST00000555543 RAB25P57735 213 aa15.94■□□□□ 0.14
VTI1B-205ENST00000555543 EIF4EBP1Q13541 118 aaPredicted RBP15.94■□□□□ 0.14
VTI1B-205ENST00000555543 FXYD3Q14802 87 aa15.94■□□□□ 0.14
VTI1B-205ENST00000555543 CTF1Q16619 201 aa15.94■□□□□ 0.14
VTI1B-205ENST00000555543 OR2B11Q5JQS5 317 aa15.94■□□□□ 0.14
VTI1B-205ENST00000555543 TMEM69Q5SWH9 247 aa15.94■□□□□ 0.14
VTI1B-205ENST00000555543 UNQ5815/PRO19632Q6UWF5 114 aa15.94■□□□□ 0.14
VTI1B-205ENST00000555543 KCTD9Q7L273 389 aa15.94■□□□□ 0.14
VTI1B-205ENST00000555543 ANKRD13BQ86YJ7 626 aa15.94■□□□□ 0.14
VTI1B-205ENST00000555543 TCTEX1D1Q8N7M0 179 aa15.94■□□□□ 0.14
VTI1B-205ENST00000555543 UBE2E2Q96LR5 201 aa15.94■□□□□ 0.14
VTI1B-205ENST00000555543 OR5B12Q96R08 314 aa15.94■□□□□ 0.14
VTI1B-205ENST00000555543 COMMD3Q9UBI1 195 aa15.94■□□□□ 0.14
VTI1B-205ENST00000555543 I3L521 148 aa15.93■□□□□ 0.14
VTI1B-205ENST00000555543 DUS4LO95620 317 aaKnown RBP15.93■□□□□ 0.14
VTI1B-205ENST00000555543 CBX5P45973 191 aa15.93■□□□□ 0.14
VTI1B-205ENST00000555543 GNB1P62873 340 aa15.93■□□□□ 0.14
VTI1B-205ENST00000555543 FHL3Q13643 280 aa15.93■□□□□ 0.14
VTI1B-205ENST00000555543 AKIRIN2Q53H80 203 aa15.93■□□□□ 0.14
VTI1B-205ENST00000555543 ACTBL2Q562R1 376 aa15.93■□□□□ 0.14
VTI1B-205ENST00000555543 IDO2Q6ZQW0 420 aa15.93■□□□□ 0.14
VTI1B-205ENST00000555543 OVCH2Q7RTZ1 564 aa15.93■□□□□ 0.14
VTI1B-205ENST00000555543 GPHA2Q96T91 129 aa15.93■□□□□ 0.14
VTI1B-205ENST00000555543 ANAPC10Q9UM13 185 aa15.93■□□□□ 0.14
VTI1B-205ENST00000555543 VSIG4Q9Y279 399 aa15.93■□□□□ 0.14
VTI1B-205ENST00000555543 FCGR3BO75015 233 aa15.92■□□□□ 0.14
VTI1B-205ENST00000555543 SLC22A5O76082 557 aa15.92■□□□□ 0.14
VTI1B-205ENST00000555543 HOXD3P31249 432 aaPredicted RBP15.92■□□□□ 0.14
VTI1B-205ENST00000555543 KRTAP10-11P60412 298 aa15.92■□□□□ 0.14
VTI1B-205ENST00000555543 TMEM267Q0VDI3 215 aaPredicted RBP15.92■□□□□ 0.14
VTI1B-205ENST00000555543 ASPHD1Q5U4P2 390 aa15.92■□□□□ 0.14
VTI1B-205ENST00000555543 GPR107Q5VW38 600 aa15.92■□□□□ 0.14
VTI1B-205ENST00000555543 OR5AP2Q8NGF4 316 aa15.92■□□□□ 0.14
VTI1B-205ENST00000555543 SECTM1Q8WVN6 248 aa15.92■□□□□ 0.14
VTI1B-205ENST00000555543 IFT46Q9NQC8 304 aa15.92■□□□□ 0.14
VTI1B-205ENST00000555543 PPYP01298 95 aa15.91■□□□□ 0.14
VTI1B-205ENST00000555543 BRWD1-AS2P59051 145 aa15.91■□□□□ 0.14
VTI1B-205ENST00000555543 UBE2KP61086 200 aa15.91■□□□□ 0.14
VTI1B-205ENST00000555543 RUNX1Q01196 453 aa15.91■□□□□ 0.14
VTI1B-205ENST00000555543 REC114Q7Z4M0 266 aa15.91■□□□□ 0.14
VTI1B-205ENST00000555543 OR11H1Q8NG94 326 aa15.91■□□□□ 0.14
VTI1B-205ENST00000555543 OSR1Q8TAX0 266 aaPredicted RBP15.91■□□□□ 0.14
VTI1B-205ENST00000555543 TCTEX1D2Q8WW35 142 aa15.91■□□□□ 0.14
VTI1B-205ENST00000555543 ALX4Q9H161 411 aaPredicted RBP15.91■□□□□ 0.14
VTI1B-205ENST00000555543 CCL28Q9NRJ3 127 aa15.91■□□□□ 0.14
VTI1B-205ENST00000555543 TAS2R8Q9NYW2 309 aa15.91■□□□□ 0.14
VTI1B-205ENST00000555543 NDUFA13Q9P0J0 144 aa15.91■□□□□ 0.14
VTI1B-205ENST00000555543 SMIM31A0A1B0GVY4 71 aa15.9■□□□□ 0.14
VTI1B-205ENST00000555543 CNIH1O95406 144 aa15.9■□□□□ 0.14
VTI1B-205ENST00000555543 SAA1P0DJI8 122 aaPredicted RBP15.9■□□□□ 0.14
VTI1B-205ENST00000555543 CDK10Q15131 360 aa15.9■□□□□ 0.14
VTI1B-205ENST00000555543 VMA21Q3ZAQ7 101 aa15.9■□□□□ 0.14
VTI1B-205ENST00000555543 GPR141Q7Z602 305 aa15.9■□□□□ 0.14
VTI1B-205ENST00000555543 TEX45Q8NA69 505 aa15.9■□□□□ 0.14
VTI1B-205ENST00000555543 OR5M8Q8NGP6 311 aa15.9■□□□□ 0.14
VTI1B-205ENST00000555543 MS4A10Q96PG2 267 aa15.9■□□□□ 0.14
VTI1B-205ENST00000555543 HSD17B10Q99714 261 aaKnown RBP15.9■□□□□ 0.14
VTI1B-205ENST00000555543 PRELID3BQ9Y3B1 194 aa15.9■□□□□ 0.14
VTI1B-205ENST00000555543 TNFSF12O43508 249 aa15.89■□□□□ 0.13
VTI1B-205ENST00000555543 HPGDSO60760 199 aa15.89■□□□□ 0.13
VTI1B-205ENST00000555543 APOA1P02647 267 aa15.89■□□□□ 0.13
VTI1B-205ENST00000555543 ELK1P19419 428 aa15.89■□□□□ 0.13
VTI1B-205ENST00000555543 RORCP51449 518 aa15.89■□□□□ 0.13
VTI1B-205ENST00000555543 FXYD4P59646 89 aa15.89■□□□□ 0.13
VTI1B-205ENST00000555543 EGFEM1PQ0D2K5 195 aa15.89■□□□□ 0.13
VTI1B-205ENST00000555543 PRSS8Q16651 343 aa15.89■□□□□ 0.13
VTI1B-205ENST00000555543 PYHIN1Q6K0P9 492 aa15.89■□□□□ 0.13
VTI1B-205ENST00000555543 MFSD4AQ8N468 514 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 458.7 ms