RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 TEX45Q8NA69 505 aa11.03□□□□□ -0.64
CSTF3-204ENST00000524556 GGTLC1Q9BX51 225 aa11.03□□□□□ -0.64
CSTF3-204ENST00000524556 LPAR5Q9H1C0 372 aa11.03□□□□□ -0.64
CSTF3-204ENST00000524556 MPPED1O15442 326 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 BPNT1O95861 308 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 CD37P11049 281 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 SRMP19623 302 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 CBX3Q13185 183 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 INSL4Q14641 139 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 TNXAQ16473 311 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 PRSS8Q16651 343 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 ACSM3Q53FZ2 586 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 TTC23Q5W5X9 447 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 CEMP1Q6PRD7 247 aaPredicted RBP11.02□□□□□ -0.65
CSTF3-204ENST00000524556 FAM89BQ8N5H3 189 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 RPP25LQ8N5L8 163 aaKnown RBP11.02□□□□□ -0.65
CSTF3-204ENST00000524556 SRSF12Q8WXF0 261 aaKnown RBP11.02□□□□□ -0.65
CSTF3-204ENST00000524556 PHYHIPQ92561 330 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 C12orf4Q9NQ89 552 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 SDHAF2Q9NX18 166 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 SMPD3Q9NY59 655 aaPredicted RBP11.02□□□□□ -0.65
CSTF3-204ENST00000524556 HSF4Q9ULV5 492 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 DMRT1Q9Y5R6 373 aa11.02□□□□□ -0.65
CSTF3-204ENST00000524556 LOC102724200A0A096LPH7 203 aaPredicted RBP11.01□□□□□ -0.65
CSTF3-204ENST00000524556 FOXI3A8MTJ6 420 aaPredicted RBP11.01□□□□□ -0.65
CSTF3-204ENST00000524556 TRDCB7Z8K6 153 aa11.01□□□□□ -0.65
CSTF3-204ENST00000524556 PPP5D1E7EU14 171 aa11.01□□□□□ -0.65
CSTF3-204ENST00000524556 LGALS9O00182 355 aa11.01□□□□□ -0.65
CSTF3-204ENST00000524556 RRASP10301 218 aa11.01□□□□□ -0.65
CSTF3-204ENST00000524556 SERPINB10P48595 397 aa11.01□□□□□ -0.65
CSTF3-204ENST00000524556 TMEM50BP56557 158 aa11.01□□□□□ -0.65
CSTF3-204ENST00000524556 UBE2KP61086 200 aa11.01□□□□□ -0.65
CSTF3-204ENST00000524556 EWSR1Q01844 656 aaKnown RBP eCLIP11.01□□□□□ -0.65
CSTF3-204ENST00000524556 RTL8BQ17RB0 113 aa11.01□□□□□ -0.65
CSTF3-204ENST00000524556 VMA21Q3ZAQ7 101 aa11.01□□□□□ -0.65
CSTF3-204ENST00000524556 FAM209BQ5JX69 171 aa11.01□□□□□ -0.65
CSTF3-204ENST00000524556 NECAP1Q8NC96 275 aa11.01□□□□□ -0.65
CSTF3-204ENST00000524556 C5orf30Q96GV9 206 aa11.01□□□□□ -0.65
CSTF3-204ENST00000524556 URM1Q9BTM9 101 aaKnown RBP11.01□□□□□ -0.65
CSTF3-204ENST00000524556 OR2D2Q9H210 308 aa11.01□□□□□ -0.65
CSTF3-204ENST00000524556 DNAH6Q9C0G6 4158 aa11.01□□□□□ -0.65
CSTF3-204ENST00000524556 A0A0J9YWU9 116 aa11□□□□□ -0.65
CSTF3-204ENST00000524556 GGCTO75223 188 aaKnown RBP11□□□□□ -0.65
CSTF3-204ENST00000524556 HLA-AP01891 365 aaKnown RBP11□□□□□ -0.65
CSTF3-204ENST00000524556 CBLN1P23435 193 aa11□□□□□ -0.65
CSTF3-204ENST00000524556 WNT4P56705 351 aa11□□□□□ -0.65
CSTF3-204ENST00000524556 TNFRSF9Q07011 255 aa11□□□□□ -0.65
CSTF3-204ENST00000524556 RBM48Q5RL73 367 aaKnown RBP11□□□□□ -0.65
CSTF3-204ENST00000524556 IDO2Q6ZQW0 420 aa11□□□□□ -0.65
CSTF3-204ENST00000524556 WFDC3Q8IUB2 231 aa11□□□□□ -0.65
CSTF3-204ENST00000524556 C10orf67Q8IYJ2 551 aa11□□□□□ -0.65
CSTF3-204ENST00000524556 TTC9CQ8N5M4 171 aa11□□□□□ -0.65
CSTF3-204ENST00000524556 OR4A4PQ8NGN8 299 aa11□□□□□ -0.65
CSTF3-204ENST00000524556 ACOT12Q8WYK0 555 aa11□□□□□ -0.65
CSTF3-204ENST00000524556 CMSS1Q9BQ75 279 aaKnown RBP11□□□□□ -0.65
CSTF3-204ENST00000524556 SELENOKQ9Y6D0 94 aa11□□□□□ -0.65
CSTF3-204ENST00000524556 MYL12BO14950 172 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 NDUFB8O95169 186 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 OR2C1O95371 312 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 TPBGQ13641 420 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 C15orf32Q32M92 178 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 ZNF57Q68EA5 555 aaPredicted RBP10.99□□□□□ -0.65
CSTF3-204ENST00000524556 GPHB5Q86YW7 130 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 TMEM61Q8N0U2 210 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 PQLC1Q8N2U9 271 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 MS4A15Q8N5U1 240 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 OR52B4Q8NGK2 314 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 OR6M1Q8NGM8 313 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 CACNG8Q8WXS5 425 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 ARHGAP5-AS1Q96IT6 56 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 SPIN2AQ99865 258 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 SPIN2BQ9BPZ2 258 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 PECRQ9BY49 303 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 S100A14Q9HCY8 104 aa10.99□□□□□ -0.65
CSTF3-204ENST00000524556 KLK5Q9Y337 293 aaPredicted RBP10.99□□□□□ -0.65
CSTF3-204ENST00000524556 BET1O15155 118 aa10.98□□□□□ -0.65
CSTF3-204ENST00000524556 OR2J3O76001 311 aa10.98□□□□□ -0.65
CSTF3-204ENST00000524556 CRYZL1O95825 349 aa10.98□□□□□ -0.65
CSTF3-204ENST00000524556 CD3GP09693 182 aa10.98□□□□□ -0.65
CSTF3-204ENST00000524556 P2RY14Q15391 338 aa10.98□□□□□ -0.65
CSTF3-204ENST00000524556 LYG2Q86SG7 212 aa10.98□□□□□ -0.65
CSTF3-204ENST00000524556 NANOGP1Q8N7R0 232 aa10.98□□□□□ -0.65
CSTF3-204ENST00000524556 SETD9Q8NE22 299 aa10.98□□□□□ -0.65
CSTF3-204ENST00000524556 ZNF430Q9H8G1 570 aaPredicted RBP10.98□□□□□ -0.65
CSTF3-204ENST00000524556 MLXQ9UH92 298 aa10.98□□□□□ -0.65
CSTF3-204ENST00000524556 TP53TG1Q9Y2A0 90 aa10.98□□□□□ -0.65
CSTF3-204ENST00000524556 TRBV6-7A0A0A0MS04 114 aa10.97□□□□□ -0.65
CSTF3-204ENST00000524556 FABP7O15540 132 aa10.97□□□□□ -0.65
CSTF3-204ENST00000524556 ANKRD55Q3KP44 614 aa10.97□□□□□ -0.65
CSTF3-204ENST00000524556 HSD17B12Q53GQ0 312 aa10.97□□□□□ -0.65
CSTF3-204ENST00000524556 IGSF11Q5DX21 431 aa10.97□□□□□ -0.65
CSTF3-204ENST00000524556 CEACAM19Q7Z692 300 aa10.97□□□□□ -0.65
CSTF3-204ENST00000524556 SLC25A42Q86VD7 318 aa10.97□□□□□ -0.65
CSTF3-204ENST00000524556 OR10J5Q8NHC4 309 aa10.97□□□□□ -0.65
CSTF3-204ENST00000524556 OSR1Q8TAX0 266 aaPredicted RBP10.97□□□□□ -0.65
CSTF3-204ENST00000524556 CYGBQ8WWM9 190 aa10.97□□□□□ -0.65
CSTF3-204ENST00000524556 ADTRPQ96IZ2 230 aa10.97□□□□□ -0.65
CSTF3-204ENST00000524556 PSORS1C1Q9UIG5 152 aa10.97□□□□□ -0.65
CSTF3-204ENST00000524556 TMEM213A2RRL7 107 aa10.96□□□□□ -0.65
CSTF3-204ENST00000524556 SPRY2O43597 315 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms