RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PGPA6NDG6 321 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 OR4C45A6NMZ5 311 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 B4DEV8 164 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 COX7A2P2O60397 106 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 CSRP1P21291 193 aaKnown RBP3.89□□□□□ -1.79
NIPBL-204ENST00000504430 C9orf66Q5T8R8 295 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 MKXQ8IYA7 352 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 C9orf62Q8N4C0 152 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 NKAPP1Q8N9T2 125 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 LXNQ9BS40 222 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 NAT8BQ9UHF3 227 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 BCL9O00512 1426 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 IQCMA0A1B0GVH7 501 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 LEUTXA8MZ59 168 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 UPK1AO00322 258 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 PROP1O75360 226 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 OPN1SWP03999 348 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 TSPAN19P0C672 248 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 PSMB2P49721 201 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 SELENOWP63302 87 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 ZNF418Q8TF45 676 aaPredicted RBP3.89□□□□□ -1.79
NIPBL-204ENST00000504430 DCANP1Q8TF63 244 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 ZNF580Q9UK33 172 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 TNS3Q68CZ2 1445 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 TRAV4A0A0B4J268 109 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 SOCS2O14508 198 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 GADD45GO95257 159 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 DBIP07108 87 aaKnown RBP3.89□□□□□ -1.79
NIPBL-204ENST00000504430 SSX1Q16384 188 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 BORCS8Q96FH0 119 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 PARP12Q9H0J9 701 aaKnown RBP3.89□□□□□ -1.79
NIPBL-204ENST00000504430 RTL1A6NKG5 1358 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 UHRF1BP1LA0JNW5 1464 aa3.89□□□□□ -1.79
NIPBL-204ENST00000504430 ATRNO75882 1429 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 PLXNB1O43157 2135 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 LST1O00453 97 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 IGHA1P01876 353 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 LHFPL1Q86WI0 220 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 RNASE6Q93091 150 aaKnown RBP3.88□□□□□ -1.79
NIPBL-204ENST00000504430 NMNAT3Q96T66 252 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 RNF11Q9Y3C5 154 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 A0A087X002 238 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 BORCS7-ASMTA0A0B4J1R7 106 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 IGHV3-16A0A0C4DH30 117 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 PIRO00625 290 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 GGCTO75223 188 aaKnown RBP3.88□□□□□ -1.79
NIPBL-204ENST00000504430 FSTL3O95633 263 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 IGHV3-48P01763 117 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 AMBPP02760 352 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 CECR9P0C854 216 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 GABARAPL2P60520 117 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 PDGFRLQ15198 375 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 PRSS54Q6PEW0 395 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 TCTE3Q8IZS6 198 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 ZNF721Q8TF20 911 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 STARD4Q96DR4 205 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 ZNF799Q96GE5 643 aa3.88□□□□□ -1.79
NIPBL-204ENST00000504430 CD2P06729 351 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 PSG2P11465 335 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 EVI2AP22794 236 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 EGFEM1PQ0D2K5 195 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 C19orf48Q6RUI8 117 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 TEX261Q6UWH6 196 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 GPR146Q96CH1 333 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 PARLQ9H300 379 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 DICER1Q9UPY3 1922 aaKnown RBP3.87□□□□□ -1.79
NIPBL-204ENST00000504430 FAM236AA0A1B0GUQ0 79 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 FAM236BA0A1B0GV22 79 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 A8MXK9 166 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 OVOL1O14753 267 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 RBFOX2O43251 390 aaKnown RBP eCLIP3.87□□□□□ -1.79
NIPBL-204ENST00000504430 MPC2O95563 127 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 CRADDP78560 199 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 BATFQ16520 125 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 UBE2NLQ5JXB2 153 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 OR2G3Q8NGZ4 309 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 OR8S1Q8NH09 359 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 SGMS2Q8NHU3 365 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 NCKAP5O14513 1909 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 IGLV4-3A0A075B6K6 122 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 IGKV1-12A0A0C4DH73 117 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 TMEM218A2RU14 115 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 CCDC179H3BU77 68 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 LGALS9O00182 355 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 IGKV1D-12P01611 117 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 HLA-DQB1P01920 261 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 SEC11BP0C7V7 166 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 UBE2NP61088 152 aaKnown RBP3.87□□□□□ -1.79
NIPBL-204ENST00000504430 MORN2Q502X0 79 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 ZNF429Q86V71 674 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 GPX7Q96SL4 187 aaPredicted RBP3.87□□□□□ -1.79
NIPBL-204ENST00000504430 SYT15Q9BQS2 421 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 MED28Q9H204 178 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 MARCH5Q9NX47 278 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 FBXL12Q9NXK8 326 aa3.87□□□□□ -1.79
NIPBL-204ENST00000504430 VPS8Q8N3P4 1428 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 SNAPC5O75971 98 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 FSHBP01225 129 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 COPZ1P61923 177 aa3.86□□□□□ -1.79
NIPBL-204ENST00000504430 PPP1CAP62136 330 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms