RNA–Protein interactions for RNA: ENST00000503621.5

CLDND1-209, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-209ENST00000503621 CD28P10747 220 aa13.58□□□□□ -0.24
CLDND1-209ENST00000503621 AADACP22760 399 aa13.58□□□□□ -0.24
CLDND1-209ENST00000503621 PPIFP30405 207 aaKnown RBP13.58□□□□□ -0.24
CLDND1-209ENST00000503621 RPS16P62249 146 aaKnown RBP13.58□□□□□ -0.24
CLDND1-209ENST00000503621 AKIRIN2Q53H80 203 aa13.58□□□□□ -0.24
CLDND1-209ENST00000503621 C9orf152Q5JTZ5 239 aa13.58□□□□□ -0.24
CLDND1-209ENST00000503621 PPP1R27Q86WC6 154 aa13.58□□□□□ -0.24
CLDND1-209ENST00000503621 ARRDC1Q8N5I2 433 aa13.58□□□□□ -0.24
CLDND1-209ENST00000503621 MINDY2Q8NBR6 621 aa13.58□□□□□ -0.24
CLDND1-209ENST00000503621 OR4F17Q8NGA8 305 aa13.58□□□□□ -0.24
CLDND1-209ENST00000503621 OR6F1Q8NGZ6 308 aa13.58□□□□□ -0.24
CLDND1-209ENST00000503621 MYOZ3Q8TDC0 251 aa13.58□□□□□ -0.24
CLDND1-209ENST00000503621 OR4F4Q96R69 305 aa13.58□□□□□ -0.24
CLDND1-209ENST00000503621 HSPB9Q9BQS6 159 aa13.58□□□□□ -0.24
CLDND1-209ENST00000503621 EHFQ9NZC4 300 aa13.58□□□□□ -0.24
CLDND1-209ENST00000503621 CREBL2O60519 120 aaPredicted RBP13.57□□□□□ -0.24
CLDND1-209ENST00000503621 IGLV1-40P01703 118 aa13.57□□□□□ -0.24
CLDND1-209ENST00000503621 CD74P04233 296 aa13.57□□□□□ -0.24
CLDND1-209ENST00000503621 PTBP1P26599 531 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLDND1-209ENST00000503621 CNTFRP26992 372 aa13.57□□□□□ -0.24
CLDND1-209ENST00000503621 UBE2KP61086 200 aa13.57□□□□□ -0.24
CLDND1-209ENST00000503621 CX3CL1P78423 397 aa13.57□□□□□ -0.24
CLDND1-209ENST00000503621 TMEM267Q0VDI3 215 aaPredicted RBP13.57□□□□□ -0.24
CLDND1-209ENST00000503621 KCTD9Q7L273 389 aa13.57□□□□□ -0.24
CLDND1-209ENST00000503621 LAX1Q8IWV1 398 aa13.57□□□□□ -0.24
CLDND1-209ENST00000503621 MFSD4AQ8N468 514 aa13.57□□□□□ -0.24
CLDND1-209ENST00000503621 OR4S2Q8NH73 311 aa13.57□□□□□ -0.24
CLDND1-209ENST00000503621 SMIM4Q8WVI0 70 aa13.57□□□□□ -0.24
CLDND1-209ENST00000503621 FCAMRQ8WWV6 532 aa13.57□□□□□ -0.24
CLDND1-209ENST00000503621 CITED2Q99967 270 aaPredicted RBP13.57□□□□□ -0.24
CLDND1-209ENST00000503621 TAS2R8Q9NYW2 309 aa13.57□□□□□ -0.24
CLDND1-209ENST00000503621 NUBP2Q9Y5Y2 271 aa13.57□□□□□ -0.24
CLDND1-209ENST00000503621 NBEAL1Q6ZS30 2694 aa13.57□□□□□ -0.24
CLDND1-209ENST00000503621 LINC01548A6NM66 108 aa13.56□□□□□ -0.24
CLDND1-209ENST00000503621 RGS5O15539 181 aa13.56□□□□□ -0.24
CLDND1-209ENST00000503621 GSTZ1O43708 216 aaPredicted RBP13.56□□□□□ -0.24
CLDND1-209ENST00000503621 PSMB8P28062 276 aa13.56□□□□□ -0.24
CLDND1-209ENST00000503621 GNRHRP30968 328 aa13.56□□□□□ -0.24
CLDND1-209ENST00000503621 HRH1P35367 487 aa13.56□□□□□ -0.24
CLDND1-209ENST00000503621 RFX2P48378 723 aa13.56□□□□□ -0.24
CLDND1-209ENST00000503621 POU2AF1Q16633 256 aa13.56□□□□□ -0.24
CLDND1-209ENST00000503621 SNX29P2Q8IUI4 249 aa13.56□□□□□ -0.24
CLDND1-209ENST00000503621 TMEM229BQ8NBD8 167 aa13.56□□□□□ -0.24
CLDND1-209ENST00000503621 VSTM2AQ8TAG5 236 aa13.56□□□□□ -0.24
CLDND1-209ENST00000503621 DEDD2Q8WXF8 326 aa13.56□□□□□ -0.24
CLDND1-209ENST00000503621 HARBI1Q96MB7 349 aa13.56□□□□□ -0.24
CLDND1-209ENST00000503621 SLC5A7Q9GZV3 580 aa13.56□□□□□ -0.24
CLDND1-209ENST00000503621 METTL1Q9UBP6 276 aaKnown RBP13.56□□□□□ -0.24
CLDND1-209ENST00000503621 SH2D7A6NKC9 451 aaPredicted RBP13.55□□□□□ -0.24
CLDND1-209ENST00000503621 SHOXO15266 292 aa13.55□□□□□ -0.24
CLDND1-209ENST00000503621 VDAC1P21796 283 aa13.55□□□□□ -0.24
CLDND1-209ENST00000503621 CDX1P47902 265 aaPredicted RBP13.55□□□□□ -0.24
CLDND1-209ENST00000503621 BRWD1-AS2P59051 145 aa13.55□□□□□ -0.24
CLDND1-209ENST00000503621 LINC00205P59089 165 aa13.55□□□□□ -0.24
CLDND1-209ENST00000503621 HERV-K104P61576 105 aa13.55□□□□□ -0.24
CLDND1-209ENST00000503621 CATR1Q13166 79 aa13.55□□□□□ -0.24
CLDND1-209ENST00000503621 VMA21Q3ZAQ7 101 aa13.55□□□□□ -0.24
CLDND1-209ENST00000503621 WFDC9Q8NEX5 89 aa13.55□□□□□ -0.24
CLDND1-209ENST00000503621 DGCR14Q96DF8 476 aaKnown RBP13.55□□□□□ -0.24
CLDND1-209ENST00000503621 DIRAS2Q96HU8 199 aa13.55□□□□□ -0.24
CLDND1-209ENST00000503621 NOL4LQ96MY1 436 aaPredicted RBP13.55□□□□□ -0.24
CLDND1-209ENST00000503621 ZNF2Q9BSG1 426 aaPredicted RBP13.55□□□□□ -0.24
CLDND1-209ENST00000503621 FBXL15Q9H469 300 aa13.55□□□□□ -0.24
CLDND1-209ENST00000503621 KLK11Q9UBX7 282 aa13.55□□□□□ -0.24
CLDND1-209ENST00000503621 PLXNB1O43157 2135 aa13.54□□□□□ -0.24
CLDND1-209ENST00000503621 TCRBV4S1A1TA0A5B7 111 aa13.54□□□□□ -0.24
CLDND1-209ENST00000503621 SRRM4A7MD48 611 aaKnown RBP13.54□□□□□ -0.24
CLDND1-209ENST00000503621 H3BUA1 57 aa13.54□□□□□ -0.24
CLDND1-209ENST00000503621 EGR2P11161 476 aaPredicted RBP13.54□□□□□ -0.24
CLDND1-209ENST00000503621 RPL30P62888 115 aaKnown RBP13.54□□□□□ -0.24
CLDND1-209ENST00000503621 LHFPL1Q86WI0 220 aa13.54□□□□□ -0.24
CLDND1-209ENST00000503621 TMEM17Q86X19 198 aa13.54□□□□□ -0.24
CLDND1-209ENST00000503621 CMTM1Q8IZ96 169 aa13.54□□□□□ -0.24
CLDND1-209ENST00000503621 OR5M8Q8NGP6 311 aa13.54□□□□□ -0.24
CLDND1-209ENST00000503621 OR52I2Q8NH67 350 aa13.54□□□□□ -0.24
CLDND1-209ENST00000503621 MCFD2Q8NI22 146 aa13.54□□□□□ -0.24
CLDND1-209ENST00000503621 SECTM1Q8WVN6 248 aa13.54□□□□□ -0.24
CLDND1-209ENST00000503621 ZNF486Q96H40 463 aaPredicted RBP13.54□□□□□ -0.24
CLDND1-209ENST00000503621 TNCP24821 2201 aa13.54□□□□□ -0.24
CLDND1-209ENST00000503621 TRAV41A0A0B4J266 112 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 MEIS3P1A6NDR6 274 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 ATP6V0E1O15342 81 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 SLC25A17O43808 307 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 CRYZL1O95825 349 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 HRASP01112 189 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 PMP2P02689 132 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 TNFSF8P32971 234 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 MAS1LP35410 378 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 ETV6P41212 452 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 TAS2R19P59542 299 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 RPL23AP62750 156 aaKnown RBP13.53□□□□□ -0.24
CLDND1-209ENST00000503621 RUNX1Q01196 453 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 PLGLAQ15195 96 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 MRGPRG-AS1Q2M3A8 158 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 CXorf66Q5JRM2 361 aaPredicted RBP13.53□□□□□ -0.24
CLDND1-209ENST00000503621 ZNF818PQ6ZRF7 136 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 OR4A5Q8NH83 315 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 PLEKHA2Q9HB19 425 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 CCL28Q9NRJ3 127 aa13.53□□□□□ -0.24
CLDND1-209ENST00000503621 GPR31O00270 319 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms