RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 ZNF562Q6V9R5 426 aa11.03□□□□□ -0.64
PDE6D-204ENST00000477748 PPP1R27Q86WC6 154 aa11.03□□□□□ -0.64
PDE6D-204ENST00000477748 MRPL41Q8IXM3 137 aaKnown RBP11.03□□□□□ -0.64
PDE6D-204ENST00000477748 DDB2Q92466 427 aa11.03□□□□□ -0.64
PDE6D-204ENST00000477748 DPF1Q92782 380 aa11.03□□□□□ -0.64
PDE6D-204ENST00000477748 DUX3Q96PT4 197 aa11.03□□□□□ -0.64
PDE6D-204ENST00000477748 FAM103A1Q9BTL3 118 aaKnown RBP11.03□□□□□ -0.64
PDE6D-204ENST00000477748 KLK15Q9H2R5 256 aa11.03□□□□□ -0.64
PDE6D-204ENST00000477748 TPSG1Q9NRR2 321 aa11.03□□□□□ -0.64
PDE6D-204ENST00000477748 RBMX2Q9Y388 322 aaKnown RBP11.03□□□□□ -0.64
PDE6D-204ENST00000477748 NUBP2Q9Y5Y2 271 aa11.03□□□□□ -0.64
PDE6D-204ENST00000477748 RYR3Q15413 4870 aa11.02□□□□□ -0.64
PDE6D-204ENST00000477748 CCL24O00175 119 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 GABARAPO95166 117 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 CRYZL1O95825 349 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 IGLV1-40P01703 118 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 IGLV2-23P01705 113 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 EIF4EP06730 217 aaKnown RBP11.02□□□□□ -0.65
PDE6D-204ENST00000477748 EGR2P11161 476 aaPredicted RBP11.02□□□□□ -0.65
PDE6D-204ENST00000477748 RORCP51449 518 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 FXYD3Q14802 87 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 CTF1Q16619 201 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 DEFB136Q30KP8 78 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 UNQ5815/PRO19632Q6UWF5 114 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 GPR141Q7Z602 305 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 TCTEX1D1Q8N7M0 179 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 MINDY2Q8NBR6 621 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 ACOT12Q8WYK0 555 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 ARPC1AQ92747 370 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 SNAPC3Q92966 411 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 RAX2Q96IS3 184 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 CMTM3Q96MX0 182 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 P2RX4Q99571 388 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 MCRIP2Q9BUT9 160 aaKnown RBP11.02□□□□□ -0.65
PDE6D-204ENST00000477748 FOXA2Q9Y261 457 aaPredicted RBP11.02□□□□□ -0.65
PDE6D-204ENST00000477748 PRELID3BQ9Y3B1 194 aa11.02□□□□□ -0.65
PDE6D-204ENST00000477748 SMIM31A0A1B0GVY4 71 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 SRRM4A7MD48 611 aaKnown RBP11.01□□□□□ -0.65
PDE6D-204ENST00000477748 FCGR3BO75015 233 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 CNIH1O95406 144 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 IGLV2-14P01704 120 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 APOA1P02647 267 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 CRYGBP07316 175 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 AADACP22760 399 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 PRSS3P35030 304 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 ALDH3B2P48448 385 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 RAB9AP51151 201 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 RAB25P57735 213 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 GNB1P62873 340 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 EGFEM1PQ0D2K5 195 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 CDK10Q15131 360 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 VMA21Q3ZAQ7 101 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 C19orf54Q5BKX5 351 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 OR2B11Q5JQS5 317 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 KCTD9Q7L273 389 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 LFNGQ8NES3 379 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 OR5AP2Q8NGF4 316 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 GRPEL2Q8TAA5 225 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 MYOZ3Q8TDC0 251 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 SECTM1Q8WVN6 248 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 C4orf3Q8WVX3 66 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 UBE2E2Q96LR5 201 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 HSD17B10Q99714 261 aaKnown RBP11.01□□□□□ -0.65
PDE6D-204ENST00000477748 DCUN1D5Q9BTE7 237 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 VSIG4Q9Y279 399 aa11.01□□□□□ -0.65
PDE6D-204ENST00000477748 MRPS7Q9Y2R9 242 aaKnown RBP11.01□□□□□ -0.65
PDE6D-204ENST00000477748 ARPC1BO15143 372 aaKnown RBP11□□□□□ -0.65
PDE6D-204ENST00000477748 SOX15O60248 233 aa11□□□□□ -0.65
PDE6D-204ENST00000477748 HPGDSO60760 199 aa11□□□□□ -0.65
PDE6D-204ENST00000477748 PPYP01298 95 aa11□□□□□ -0.65
PDE6D-204ENST00000477748 RPL30P62888 115 aaKnown RBP11□□□□□ -0.65
PDE6D-204ENST00000477748 PJVKQ0ZLH3 352 aa11□□□□□ -0.65
PDE6D-204ENST00000477748 KIAA0141Q14154 515 aaPredicted RBP11□□□□□ -0.65
PDE6D-204ENST00000477748 AKIRIN2Q53H80 203 aa11□□□□□ -0.65
PDE6D-204ENST00000477748 ACTBL2Q562R1 376 aa11□□□□□ -0.65
PDE6D-204ENST00000477748 MZT2AQ6P582 158 aa11□□□□□ -0.65
PDE6D-204ENST00000477748 ZNF491Q8N8L2 437 aa11□□□□□ -0.65
PDE6D-204ENST00000477748 OR5M8Q8NGP6 311 aa11□□□□□ -0.65
PDE6D-204ENST00000477748 OSR1Q8TAX0 266 aaPredicted RBP11□□□□□ -0.65
PDE6D-204ENST00000477748 TCTEX1D2Q8WW35 142 aa11□□□□□ -0.65
PDE6D-204ENST00000477748 AP3S1Q92572 193 aa11□□□□□ -0.65
PDE6D-204ENST00000477748 GNB4Q9HAV0 340 aa11□□□□□ -0.65
PDE6D-204ENST00000477748 CCL28Q9NRJ3 127 aa11□□□□□ -0.65
PDE6D-204ENST00000477748 TAS2R8Q9NYW2 309 aa11□□□□□ -0.65
PDE6D-204ENST00000477748 K7EIL1 84 aa10.99□□□□□ -0.65
PDE6D-204ENST00000477748 ZNF182P17025 639 aaPredicted RBP10.99□□□□□ -0.65
PDE6D-204ENST00000477748 CD40LGP29965 261 aa10.99□□□□□ -0.65
PDE6D-204ENST00000477748 FXYD4P59646 89 aa10.99□□□□□ -0.65
PDE6D-204ENST00000477748 UBE2KP61086 200 aa10.99□□□□□ -0.65
PDE6D-204ENST00000477748 DCTN2Q13561 401 aaKnown RBP10.99□□□□□ -0.65
PDE6D-204ENST00000477748 PYHIN1Q6K0P9 492 aa10.99□□□□□ -0.65
PDE6D-204ENST00000477748 ZNF66Q6ZN08 573 aa10.99□□□□□ -0.65
PDE6D-204ENST00000477748 MFSD4AQ8N468 514 aa10.99□□□□□ -0.65
PDE6D-204ENST00000477748 TEX45Q8NA69 505 aa10.99□□□□□ -0.65
PDE6D-204ENST00000477748 CASTOR1Q8WTX7 329 aa10.99□□□□□ -0.65
PDE6D-204ENST00000477748 GIMAP1Q8WWP7 306 aa10.99□□□□□ -0.65
PDE6D-204ENST00000477748 OR5B12Q96R08 314 aa10.99□□□□□ -0.65
PDE6D-204ENST00000477748 SLC5A7Q9GZV3 580 aa10.99□□□□□ -0.65
PDE6D-204ENST00000477748 EHFQ9NZC4 300 aa10.99□□□□□ -0.65
PDE6D-204ENST00000477748 ZMAT5Q9UDW3 170 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms