RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 SSX1Q16384 188 aa10.15□□□□□ -0.78
CPSF4-210ENST00000469897 OR9G4Q8NGQ1 327 aa10.15□□□□□ -0.78
CPSF4-210ENST00000469897 PHB2Q99623 299 aa10.15□□□□□ -0.78
CPSF4-210ENST00000469897 CABLES2Q9BTV7 478 aa10.15□□□□□ -0.78
CPSF4-210ENST00000469897 TINAGL1Q9GZM7 467 aaPredicted RBP10.15□□□□□ -0.78
CPSF4-210ENST00000469897 C19orf73Q9NVV2 129 aa10.15□□□□□ -0.78
CPSF4-210ENST00000469897 COA4Q9NYJ1 87 aa10.15□□□□□ -0.78
CPSF4-210ENST00000469897 ADAM30Q9UKF2 790 aa10.15□□□□□ -0.78
CPSF4-210ENST00000469897 ELF5Q9UKW6 265 aaPredicted RBP10.15□□□□□ -0.78
CPSF4-210ENST00000469897 HUWE1Q7Z6Z7 4374 aaKnown RBP10.14□□□□□ -0.79
CPSF4-210ENST00000469897 TRAV1-2A0A0B4J238 106 aa10.14□□□□□ -0.79
CPSF4-210ENST00000469897 MFNGO00587 321 aa10.14□□□□□ -0.79
CPSF4-210ENST00000469897 RBMXL2O75526 392 aaKnown RBP10.14□□□□□ -0.79
CPSF4-210ENST00000469897 TRBV12-3P01733 135 aa10.14□□□□□ -0.79
CPSF4-210ENST00000469897 LYL1P12980 280 aa10.14□□□□□ -0.79
CPSF4-210ENST00000469897 HIST1H1DP16402 221 aaKnown RBP10.14□□□□□ -0.79
CPSF4-210ENST00000469897 GADD45AP24522 165 aa10.14□□□□□ -0.79
CPSF4-210ENST00000469897 TAGLNQ01995 201 aaKnown RBP10.14□□□□□ -0.79
CPSF4-210ENST00000469897 CBX3Q13185 183 aa10.14□□□□□ -0.79
CPSF4-210ENST00000469897 ARFRP1Q13795 201 aa10.14□□□□□ -0.79
CPSF4-210ENST00000469897 RTL8BQ17RB0 113 aa10.14□□□□□ -0.79
CPSF4-210ENST00000469897 ZNF343Q6P1L6 599 aa10.14□□□□□ -0.79
CPSF4-210ENST00000469897 IDO2Q6ZQW0 420 aa10.14□□□□□ -0.79
CPSF4-210ENST00000469897 TEX45Q8NA69 505 aa10.14□□□□□ -0.79
CPSF4-210ENST00000469897 CNBD2Q96M20 576 aa10.14□□□□□ -0.79
CPSF4-210ENST00000469897 GINS4Q9BRT9 223 aa10.14□□□□□ -0.79
CPSF4-210ENST00000469897 ATG5Q9H1Y0 275 aa10.14□□□□□ -0.79
CPSF4-210ENST00000469897 METTL21EPA6NDL7 271 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 LINC00473A8K010 186 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 BRI3O95415 125 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 RRASP10301 218 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 RAB3BP20337 219 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 RAB6AP20340 208 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 AADACP22760 399 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 DUTP33316 252 aaKnown RBP10.13□□□□□ -0.79
CPSF4-210ENST00000469897 DYRK1AQ13627 763 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 TNXAQ16473 311 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 PRSS8Q16651 343 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 TATDN3Q17R31 274 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 CDNFQ49AH0 187 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 SGPP2Q8IWX5 399 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 DDB2Q92466 427 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 USMG5Q96IX5 58 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 TM2D3Q9BRN9 247 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 ST6GALNAC5Q9BVH7 336 aa10.13□□□□□ -0.79
CPSF4-210ENST00000469897 GAR1Q9NY12 217 aaKnown RBP10.13□□□□□ -0.79
CPSF4-210ENST00000469897 TRDV1A0A1B0GX56 115 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 SMIM30A4D0T7 59 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 H0Y980 276 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 DIRAS3O95661 229 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 CRYZL1O95825 349 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 PRH1P02810 166 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 CSN3P07498 182 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 UBE2KP61086 200 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 VMA21Q3ZAQ7 101 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 C22orf42Q6IC83 251 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 ZNF367Q7RTV3 350 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 NR2C2APQ86WQ0 139 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 H1FOOQ8IZA3 346 aaPredicted RBP10.12□□□□□ -0.79
CPSF4-210ENST00000469897 ADAD2Q8NCV1 583 aaKnown RBP10.12□□□□□ -0.79
CPSF4-210ENST00000469897 ACOT12Q8WYK0 555 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 CITED4Q96RK1 184 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 DCUN1D5Q9BTE7 237 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 PALMDQ9NP74 551 aa10.12□□□□□ -0.79
CPSF4-210ENST00000469897 A8MZ25 164 aa10.11□□□□□ -0.79
CPSF4-210ENST00000469897 MPPED1O15442 326 aa10.11□□□□□ -0.79
CPSF4-210ENST00000469897 OR9G9P0C7N8 305 aa10.11□□□□□ -0.79
CPSF4-210ENST00000469897 MYL9P24844 172 aa10.11□□□□□ -0.79
CPSF4-210ENST00000469897 TBCEQ15813 527 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-210ENST00000469897 RPEL1Q2QD12 228 aa10.11□□□□□ -0.79
CPSF4-210ENST00000469897 ZFAND6Q6FIF0 208 aa10.11□□□□□ -0.79
CPSF4-210ENST00000469897 Q6ZS49 121 aa10.11□□□□□ -0.79
CPSF4-210ENST00000469897 SRSF12Q8WXF0 261 aaKnown RBP10.11□□□□□ -0.79
CPSF4-210ENST00000469897 SNAPC3Q92966 411 aa10.11□□□□□ -0.79
CPSF4-210ENST00000469897 ADTRPQ96IZ2 230 aa10.11□□□□□ -0.79
CPSF4-210ENST00000469897 CENPOQ9BU64 300 aa10.11□□□□□ -0.79
CPSF4-210ENST00000469897 ZNF430Q9H8G1 570 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-210ENST00000469897 AKIP1Q9NQ31 210 aa10.11□□□□□ -0.79
CPSF4-210ENST00000469897 IZUMO1RA6ND01 250 aa10.1□□□□□ -0.79
CPSF4-210ENST00000469897 FCGR3BO75015 233 aa10.1□□□□□ -0.79
CPSF4-210ENST00000469897 TUSC2O75896 110 aa10.1□□□□□ -0.79
CPSF4-210ENST00000469897 NFYAP23511 347 aaPredicted RBP10.1□□□□□ -0.79
CPSF4-210ENST00000469897 RPL30P62888 115 aaKnown RBP10.1□□□□□ -0.79
CPSF4-210ENST00000469897 ZNF45Q02386 682 aa10.1□□□□□ -0.79
CPSF4-210ENST00000469897 ATP5G2Q06055 141 aa10.1□□□□□ -0.79
CPSF4-210ENST00000469897 HAGHQ16775 308 aa10.1□□□□□ -0.79
CPSF4-210ENST00000469897 IZUMO2Q6UXV1 221 aa10.1□□□□□ -0.79
CPSF4-210ENST00000469897 OSR1Q8TAX0 266 aaPredicted RBP10.1□□□□□ -0.79
CPSF4-210ENST00000469897 TUBA4BQ9H853 241 aa10.1□□□□□ -0.79
CPSF4-210ENST00000469897 NDUFB11Q9NX14 153 aa10.1□□□□□ -0.79
CPSF4-210ENST00000469897 DTYMKP23919 212 aa10.09□□□□□ -0.79
CPSF4-210ENST00000469897 MECP2P51608 486 aaKnown RBP10.09□□□□□ -0.79
CPSF4-210ENST00000469897 RHOGP84095 191 aa10.09□□□□□ -0.79
CPSF4-210ENST00000469897 CDK10Q15131 360 aa10.09□□□□□ -0.79
CPSF4-210ENST00000469897 OR2B11Q5JQS5 317 aa10.09□□□□□ -0.79
CPSF4-210ENST00000469897 VKORC1L1Q8N0U8 176 aa10.09□□□□□ -0.79
CPSF4-210ENST00000469897 ZNF645Q8N7E2 425 aa10.09□□□□□ -0.79
CPSF4-210ENST00000469897 VCX3BQ9H321 246 aa10.09□□□□□ -0.79
CPSF4-210ENST00000469897 EDA2RQ9HAV5 297 aa10.09□□□□□ -0.79
CPSF4-210ENST00000469897 SIGLEC8Q9NYZ4 499 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms