RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 RAB9BQ9NP90 201 aa15.06■□□□□ 0
COL9A3-205ENST00000466192 UQCC1Q9NVA1 299 aa15.06■□□□□ 0
COL9A3-205ENST00000466192 ZNF729A6NN14 1252 aaPredicted RBP15.05■□□□□ 0
COL9A3-205ENST00000466192 TSPAN15O95858 294 aa15.05■□□□□ 0
COL9A3-205ENST00000466192 P0C879 139 aa15.05■□□□□ 0
COL9A3-205ENST00000466192 DUTP33316 252 aaKnown RBP15.05■□□□□ 0
COL9A3-205ENST00000466192 RAB5CP51148 216 aa15.05■□□□□ 0
COL9A3-205ENST00000466192 RUNX1Q01196 453 aa15.05■□□□□ 0
COL9A3-205ENST00000466192 RPL39P5Q59GN2 51 aa15.05■□□□□ 0
COL9A3-205ENST00000466192 LYPD2Q6UXB3 125 aa15.05■□□□□ 0
COL9A3-205ENST00000466192 TCTEX1D1Q8N7M0 179 aa15.05■□□□□ 0
COL9A3-205ENST00000466192 TMEM204Q9BSN7 226 aa15.05■□□□□ 0
COL9A3-205ENST00000466192 IGHV1-69-2A0A0G2JMI3 117 aa15.05■□□□□ -0
COL9A3-205ENST00000466192 A0A1W2PPE3 182 aa15.05■□□□□ -0
COL9A3-205ENST00000466192 F8W036 122 aa15.05■□□□□ -0
COL9A3-205ENST00000466192 MMP23AO75900 390 aa15.05■□□□□ -0
COL9A3-205ENST00000466192 ATG12O94817 140 aa15.05■□□□□ -0
COL9A3-205ENST00000466192 RPL35P42766 123 aaKnown RBP15.05■□□□□ -0
COL9A3-205ENST00000466192 TNFRSF9Q07011 255 aa15.05■□□□□ -0
COL9A3-205ENST00000466192 HFEQ30201 348 aa15.05■□□□□ -0
COL9A3-205ENST00000466192 CT45A1Q5HYN5 189 aa15.05■□□□□ -0
COL9A3-205ENST00000466192 SPANXN5Q5MJ07 72 aa15.05■□□□□ -0
COL9A3-205ENST00000466192 CT45A3Q8NHU0 189 aa15.05■□□□□ -0
COL9A3-205ENST00000466192 C19orf12Q9NSK7 152 aa15.05■□□□□ -0
COL9A3-205ENST00000466192 ITGB1BP1O14713 200 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 NFYBP25208 207 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 AKR1D1P51857 326 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 C1orf229Q6ZS94 237 aaPredicted RBP15.04■□□□□ -0
COL9A3-205ENST00000466192 H2BFWTQ7Z2G1 175 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 FAM213BQ8TBF2 198 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 TSNAXQ99598 290 aaKnown RBP15.04■□□□□ -0
COL9A3-205ENST00000466192 ABHD14AQ9BUJ0 271 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 IDI2-AS1Q9NZ38 188 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 MLXQ9UH92 298 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 hADV38S2A0JD32 116 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 TMEM8BA6NDV4 472 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 FAM90A26D6RGX4 464 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 RNASEK-C17orf49H0YIS7 233 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 M0R1X1 148 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 RBKSQ9H477 322 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 STRAPQ9Y3F4 350 aaKnown RBP15.04■□□□□ -0
COL9A3-205ENST00000466192 LINC00312Q9Y6C7 94 aa15.04■□□□□ -0
COL9A3-205ENST00000466192 MARCH11A6NNE9 402 aa15.03■□□□□ -0
COL9A3-205ENST00000466192 FCGR3BO75015 233 aa15.03■□□□□ -0
COL9A3-205ENST00000466192 RBMXL2O75526 392 aaKnown RBP15.03■□□□□ -0
COL9A3-205ENST00000466192 ARL16Q0P5N6 197 aa15.03■□□□□ -0
COL9A3-205ENST00000466192 GUCA2BQ16661 112 aa15.03■□□□□ -0
COL9A3-205ENST00000466192 ZNF439Q8NDP4 499 aa15.03■□□□□ -0
COL9A3-205ENST00000466192 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.03■□□□□ -0
COL9A3-205ENST00000466192 CTSZQ9UBR2 303 aa15.03■□□□□ -0
COL9A3-205ENST00000466192 HSPB7Q9UBY9 170 aa15.03■□□□□ -0
COL9A3-205ENST00000466192 LAMP3Q9UQV4 416 aa15.03■□□□□ -0
COL9A3-205ENST00000466192 A0A1B0GV50 99 aa15.02■□□□□ -0
COL9A3-205ENST00000466192 DFFBO76075 338 aa15.02■□□□□ -0
COL9A3-205ENST00000466192 UQCRFS1P47985 274 aa15.02■□□□□ -0
COL9A3-205ENST00000466192 RAB7AP51149 207 aa15.02■□□□□ -0
COL9A3-205ENST00000466192 ERVFRD-1P60508 538 aa15.02■□□□□ -0
COL9A3-205ENST00000466192 RPL31P62899 125 aaKnown RBP15.02■□□□□ -0
COL9A3-205ENST00000466192 PRAMEF5Q5TYX0 476 aa15.02■□□□□ -0
COL9A3-205ENST00000466192 SLC25A24Q6NUK1 477 aa15.02■□□□□ -0
COL9A3-205ENST00000466192 ACACBO00763 2458 aa15.02■□□□□ -0
COL9A3-205ENST00000466192 SNCAP37840 140 aa15.02□□□□□ -0.01
COL9A3-205ENST00000466192 RAB13P51153 203 aa15.02□□□□□ -0.01
COL9A3-205ENST00000466192 TAS2R30P59541 319 aa15.02□□□□□ -0.01
COL9A3-205ENST00000466192 MEF2CQ06413 473 aaPredicted RBP15.02□□□□□ -0.01
COL9A3-205ENST00000466192 HAPLN4Q86UW8 402 aa15.02□□□□□ -0.01
COL9A3-205ENST00000466192 CD300LFQ8TDQ1 290 aa15.02□□□□□ -0.01
COL9A3-205ENST00000466192 GNPNAT1Q96EK6 184 aaPredicted RBP15.02□□□□□ -0.01
COL9A3-205ENST00000466192 LYNX1G3V0Z9 82 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 RAB29O14966 203 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 CD5P06127 495 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 LYNX1P0DP58 116 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 R3HDM4Q96D70 268 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 RPUSD1Q9UJJ7 312 aaKnown RBP15.01□□□□□ -0.01
COL9A3-205ENST00000466192 GAB2Q9UQC2 676 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 SAA2-SAA4A0A096LPE2 208 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 UMAD1C9J7I0 102 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 C9JQL5 133 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 NDUFB3O43676 98 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 F12P00748 615 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-205ENST00000466192 IFNA5P01569 189 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 SAA2P0DJI9 122 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-205ENST00000466192 GNG10P50151 68 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 DVL1P1P54792 670 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-205ENST00000466192 C10orf91Q5T1B1 145 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 TMEM200BQ69YZ2 307 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 SVBPQ8N300 66 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 ZDHHC16Q969W1 377 aa15.01□□□□□ -0.01
COL9A3-205ENST00000466192 DVL1O14640 695 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 SFTA3P0C7M3 94 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 CCL3L1P16619 93 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 COL8A2P25067 703 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 HBG1P69891 147 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 HBG2P69892 147 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 SPINK9Q5DT21 86 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 SSX9Q7RTT3 188 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 THNSL2Q86YJ6 484 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 PUSL1Q8N0Z8 303 aaKnown RBP15□□□□□ -0.01
COL9A3-205ENST00000466192 LILRB2Q8N423 598 aa15□□□□□ -0.01
COL9A3-205ENST00000466192 ZNF251Q9BRH9 671 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms