RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ZNF221Q9UK13 617 aa12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 A0A0A6YYD4 124 aa12.73□□□□□ -0.37
UBE2D4-209ENST00000454428 TUSC2O75896 110 aa12.73□□□□□ -0.37
UBE2D4-209ENST00000454428 PRSS8Q16651 343 aa12.73□□□□□ -0.37
UBE2D4-209ENST00000454428 GPHB5Q86YW7 130 aa12.73□□□□□ -0.37
UBE2D4-209ENST00000454428 ZNF485Q8NCK3 441 aa12.73□□□□□ -0.37
UBE2D4-209ENST00000454428 SRSF12Q8WXF0 261 aaKnown RBP12.73□□□□□ -0.37
UBE2D4-209ENST00000454428 SLC29A1Q99808 456 aa12.73□□□□□ -0.37
UBE2D4-209ENST00000454428 CHMP1AQ9HD42 196 aaPredicted RBP12.73□□□□□ -0.37
UBE2D4-209ENST00000454428 GHRLQ9UBU3 117 aa12.73□□□□□ -0.37
UBE2D4-209ENST00000454428 ORC6Q9Y5N6 252 aa12.73□□□□□ -0.37
UBE2D4-209ENST00000454428 GGCTO75223 188 aaKnown RBP12.72□□□□□ -0.37
UBE2D4-209ENST00000454428 WBP4O75554 376 aaKnown RBP12.72□□□□□ -0.37
UBE2D4-209ENST00000454428 MED14OSP0DP75 135 aa12.72□□□□□ -0.37
UBE2D4-209ENST00000454428 UNC119Q13432 240 aa12.72□□□□□ -0.37
UBE2D4-209ENST00000454428 TNXAQ16473 311 aa12.72□□□□□ -0.37
UBE2D4-209ENST00000454428 C15orf32Q32M92 178 aa12.72□□□□□ -0.37
UBE2D4-209ENST00000454428 TMPRSS11AQ6ZMR5 421 aa12.72□□□□□ -0.37
UBE2D4-209ENST00000454428 IDO2Q6ZQW0 420 aa12.72□□□□□ -0.37
UBE2D4-209ENST00000454428 NECAP1Q8NC96 275 aa12.72□□□□□ -0.37
UBE2D4-209ENST00000454428 THRSPQ92748 146 aa12.72□□□□□ -0.37
UBE2D4-209ENST00000454428 TM2D1Q9BX74 207 aa12.72□□□□□ -0.37
UBE2D4-209ENST00000454428 AK3Q9UIJ7 227 aa12.72□□□□□ -0.37
UBE2D4-209ENST00000454428 A8MWP6 167 aa12.71□□□□□ -0.37
UBE2D4-209ENST00000454428 OR2J3O76001 311 aa12.71□□□□□ -0.37
UBE2D4-209ENST00000454428 DCKP27707 260 aa12.71□□□□□ -0.37
UBE2D4-209ENST00000454428 APOC4P55056 127 aa12.71□□□□□ -0.37
UBE2D4-209ENST00000454428 C1orf146Q5VVC0 180 aa12.71□□□□□ -0.37
UBE2D4-209ENST00000454428 BTNL8Q6UX41 500 aa12.71□□□□□ -0.37
UBE2D4-209ENST00000454428 C19orf35Q6ZS72 473 aa12.71□□□□□ -0.37
UBE2D4-209ENST00000454428 TTC9CQ8N5M4 171 aa12.71□□□□□ -0.37
UBE2D4-209ENST00000454428 NKAIN3Q8N8D7 197 aa12.71□□□□□ -0.37
UBE2D4-209ENST00000454428 UXS1Q8NBZ7 420 aa12.71□□□□□ -0.37
UBE2D4-209ENST00000454428 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.71□□□□□ -0.37
UBE2D4-209ENST00000454428 CCDC140Q96MF4 163 aa12.71□□□□□ -0.37
UBE2D4-209ENST00000454428 SDHAF2Q9NX18 166 aa12.71□□□□□ -0.37
UBE2D4-209ENST00000454428 RDH8Q9NYR8 311 aa12.71□□□□□ -0.37
UBE2D4-209ENST00000454428 SHOXO15266 292 aa12.7□□□□□ -0.38
UBE2D4-209ENST00000454428 UBE2KP61086 200 aa12.7□□□□□ -0.38
UBE2D4-209ENST00000454428 QRFPP83859 136 aa12.7□□□□□ -0.38
UBE2D4-209ENST00000454428 CBR4Q8N4T8 237 aa12.7□□□□□ -0.38
UBE2D4-209ENST00000454428 TEX45Q8NA69 505 aa12.7□□□□□ -0.38
UBE2D4-209ENST00000454428 TMEM59Q9BXS4 323 aa12.7□□□□□ -0.38
UBE2D4-209ENST00000454428 Q9N2K0 584 aa12.7□□□□□ -0.38
UBE2D4-209ENST00000454428 EXOSC1Q9Y3B2 195 aaKnown RBP12.7□□□□□ -0.38
UBE2D4-209ENST00000454428 UBE2CO00762 179 aa12.69□□□□□ -0.38
UBE2D4-209ENST00000454428 MPPED1O15442 326 aa12.69□□□□□ -0.38
UBE2D4-209ENST00000454428 IGHV3-23P01764 117 aa12.69□□□□□ -0.38
UBE2D4-209ENST00000454428 ANKRD55Q3KP44 614 aa12.69□□□□□ -0.38
UBE2D4-209ENST00000454428 C10orf55Q5SWW7 151 aa12.69□□□□□ -0.38
UBE2D4-209ENST00000454428 TMEM217Q8N7C4 229 aa12.69□□□□□ -0.38
UBE2D4-209ENST00000454428 PYDC1Q8WXC3 89 aa12.69□□□□□ -0.38
UBE2D4-209ENST00000454428 ZNF430Q9H8G1 570 aaPredicted RBP12.69□□□□□ -0.38
UBE2D4-209ENST00000454428 PLEKHJ1Q9NW61 149 aa12.69□□□□□ -0.38
UBE2D4-209ENST00000454428 HERC1Q15751 4861 aa12.69□□□□□ -0.38
UBE2D4-209ENST00000454428 LRP1BQ9NZR2 4599 aa12.69□□□□□ -0.38
UBE2D4-209ENST00000454428 KIR2DL5BA0A0G2JN68 375 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 KIR2DL5BA0A0G2JPC4 375 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 PNMA8CA0A1B0GUJ8 204 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 LOC100130705A0A1B0GUX0 176 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 FOXI3A8MTJ6 420 aaPredicted RBP12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 SOCS1O15524 211 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 S1PR2O95136 353 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 UBBP0CG47 229 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 C8orf88P0DMB2 117 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 CTRB1P17538 263 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 NANOS2P60321 138 aaKnown RBP12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 CTRB2Q6GPI1 263 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 KIR2DL5AQ8N109 375 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 OR1L6Q8NGR2 347 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 KIR2DL5BQ8NHK3 375 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 FBLIM1Q8WUP2 373 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 ACOT12Q8WYK0 555 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 OR2D2Q9H210 308 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 RIMS4Q9H426 269 aaPredicted RBP12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 UBQLN2Q9UHD9 624 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 DIMT1Q9UNQ2 313 aaKnown RBP12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 S4R3C0 116 aa12.68□□□□□ -0.38
UBE2D4-209ENST00000454428 ZNF320A2RRD8 509 aa12.67□□□□□ -0.38
UBE2D4-209ENST00000454428 TMEM14DPA8MWL7 114 aa12.67□□□□□ -0.38
UBE2D4-209ENST00000454428 CD3GP09693 182 aa12.67□□□□□ -0.38
UBE2D4-209ENST00000454428 FCGR2BP31994 310 aaPredicted RBP12.67□□□□□ -0.38
UBE2D4-209ENST00000454428 INSL4Q14641 139 aa12.67□□□□□ -0.38
UBE2D4-209ENST00000454428 FAM209BQ5JX69 171 aa12.67□□□□□ -0.38
UBE2D4-209ENST00000454428 C1orf100Q5SVJ3 147 aa12.67□□□□□ -0.38
UBE2D4-209ENST00000454428 CLEC19AQ6UXS0 136 aa12.67□□□□□ -0.38
UBE2D4-209ENST00000454428 UNQ9165/PRO28630Q6UXU0 137 aa12.67□□□□□ -0.38
UBE2D4-209ENST00000454428 CEACAM19Q7Z692 300 aa12.67□□□□□ -0.38
UBE2D4-209ENST00000454428 GGHQ92820 318 aa12.67□□□□□ -0.38
UBE2D4-209ENST00000454428 FANCD2OSQ96PS1 177 aa12.67□□□□□ -0.38
UBE2D4-209ENST00000454428 LPAR5Q9H1C0 372 aa12.67□□□□□ -0.38
UBE2D4-209ENST00000454428 TRAV25A0A0B4J276 109 aa12.66□□□□□ -0.38
UBE2D4-209ENST00000454428 HMX3A6NHT5 357 aa12.66□□□□□ -0.38
UBE2D4-209ENST00000454428 TEX22C9J3V5 150 aa12.66□□□□□ -0.38
UBE2D4-209ENST00000454428 SRMP19623 302 aa12.66□□□□□ -0.38
UBE2D4-209ENST00000454428 ARL3P36405 182 aa12.66□□□□□ -0.38
UBE2D4-209ENST00000454428 ODF3L2Q3SX64 289 aa12.66□□□□□ -0.38
UBE2D4-209ENST00000454428 VMA21Q3ZAQ7 101 aa12.66□□□□□ -0.38
UBE2D4-209ENST00000454428 LRRTM1Q86UE6 522 aa12.66□□□□□ -0.38
UBE2D4-209ENST00000454428 OR2C3Q8N628 320 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms