RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 PHLDA2Q53GA4 152 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 C9orf152Q5JTZ5 239 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 TRIQKQ629K1 86 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 ZNF57Q68EA5 555 aaPredicted RBP7.37□□□□□ -1.23
PDGFC-202ENST00000422544 LPCAT3Q6P1A2 487 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 C11orf88Q6PI97 169 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 ZNF66Q6ZN08 573 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 KCTD9Q7L273 389 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 LHFPL1Q86WI0 220 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 PDPNQ86YL7 162 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 Q8N9W7 124 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 OR8H1Q8NGG4 311 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 OR51S1Q8NGJ8 323 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 OR4F5Q8NH21 305 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 LINC01006Q8NI28 216 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 TCTEX1D2Q8WW35 142 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 FLYWCH2Q96CP2 140 aaKnown RBP7.37□□□□□ -1.23
PDGFC-202ENST00000422544 RSRP1Q9BUV0 290 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 PRSS22Q9GZN4 317 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 C16orf95Q9H693 158 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 RANBP3Q9H6Z4 567 aaPredicted RBP7.37□□□□□ -1.23
PDGFC-202ENST00000422544 ZNF702PQ9H963 129 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 HRASLSQ9HDD0 168 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 MCUBQ9NWR8 336 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 PRELID3BQ9Y3B1 194 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 NOTCH1P46531 2555 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 LINC00854A0A1B0GVQ3 168 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 CLPSL1A2RUU4 121 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 SRRM4A7MD48 611 aaKnown RBP7.36□□□□□ -1.23
PDGFC-202ENST00000422544 GPR31O00270 319 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 NBR2O15453 112 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 FGF16O43320 207 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 CRYZL1O95825 349 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 RRASP10301 218 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 INPP1P49441 399 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 BRWD1-AS2P59051 145 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 FOXL1Q12952 345 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 CBX3Q13185 183 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 AWAT1Q58HT5 328 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 IDO2Q6ZQW0 420 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 CMTM1Q8IZ96 169 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 SLC38A6Q8IZM9 456 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 Q8N2B8 174 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 NPBQ8NG41 125 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 OR13C8Q8NGS7 320 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 OR51H1Q8NH63 302 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 OR2T6Q8NHC8 308 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 MARCH1Q8TCQ1 289 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 S100ZQ8WXG8 99 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 BORCS5Q969J3 196 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 MRGPRFQ96AM1 343 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 RNF5Q99942 180 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 RASL11BQ9BPW5 248 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 BEX1Q9HBH7 125 aa7.36□□□□□ -1.23
PDGFC-202ENST00000422544 LINC01548A6NM66 108 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 RRHO14718 337 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 SHOXO15266 292 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 RAMP3O60896 148 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 RLN1P04808 185 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 IL7P13232 177 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 FAUP35544 74 aaKnown RBP7.35□□□□□ -1.23
PDGFC-202ENST00000422544 LGALS7P47929 136 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 COMPP49747 757 aaPredicted RBP7.35□□□□□ -1.23
PDGFC-202ENST00000422544 CATR1Q13166 79 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 PSG5Q15238 335 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 C5orf64Q2M2E5 130 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 TMEM95Q3KNT9 176 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 TMEM177Q53S58 311 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 ARSJQ5FYB0 599 aaPredicted RBP7.35□□□□□ -1.23
PDGFC-202ENST00000422544 LIN54Q6MZP7 749 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 TBC1D26Q86UD7 250 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 SPAG16Q8N0X2 631 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 FAM71E2Q8N5Q1 922 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 ZFAND1Q8TCF1 268 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 HARBI1Q96MB7 349 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 CLCC1Q96S66 551 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 TSNAXQ99598 290 aaKnown RBP7.35□□□□□ -1.23
PDGFC-202ENST00000422544 PRRT1Q99946 306 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 FBXL15Q9H469 300 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 SERTAD4Q9NUC0 356 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 LIN7CQ9NUP9 197 aaKnown RBP7.35□□□□□ -1.23
PDGFC-202ENST00000422544 SLC2A8Q9NY64 477 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 KIAA1456Q9P272 454 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 SCP2D1Q9UJQ7 156 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 RNF114Q9Y508 228 aa7.35□□□□□ -1.23
PDGFC-202ENST00000422544 A0A1B0GUS0 222 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 FCN1O00602 326 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 MPPED1O15442 326 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 SLC25A17O43808 307 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 NDUFA3O95167 84 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 IGLV2-23P01705 113 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 S100GP29377 79 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 KIR2DS2P43631 304 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 VDAC2P45880 294 aaPredicted RBP7.34□□□□□ -1.23
PDGFC-202ENST00000422544 PIGPP57054 158 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 ZNF846Q147U1 533 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 PLGLAQ15195 96 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 C12orf54Q6X4T0 127 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 VKORC1L1Q8N0U8 176 aa7.34□□□□□ -1.23
PDGFC-202ENST00000422544 POC5Q8NA72 575 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms