RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 CTF1Q16619 201 aa14.7□□□□□ -0.06
TRIM56-202ENST00000412507 DEFB136Q30KP8 78 aa14.7□□□□□ -0.06
TRIM56-202ENST00000412507 C19orf54Q5BKX5 351 aa14.7□□□□□ -0.06
TRIM56-202ENST00000412507 TMEM65Q6PI78 240 aa14.7□□□□□ -0.06
TRIM56-202ENST00000412507 ZNF562Q6V9R5 426 aa14.7□□□□□ -0.06
TRIM56-202ENST00000412507 GPR141Q7Z602 305 aa14.7□□□□□ -0.06
TRIM56-202ENST00000412507 PPP1R27Q86WC6 154 aa14.7□□□□□ -0.06
TRIM56-202ENST00000412507 MYOZ3Q8TDC0 251 aa14.7□□□□□ -0.06
TRIM56-202ENST00000412507 SNAPC3Q92966 411 aa14.7□□□□□ -0.06
TRIM56-202ENST00000412507 P2RX4Q99571 388 aa14.7□□□□□ -0.06
TRIM56-202ENST00000412507 RBMX2Q9Y388 322 aaKnown RBP14.7□□□□□ -0.06
TRIM56-202ENST00000412507 PRKDCP78527 4128 aaKnown RBP14.69□□□□□ -0.06
TRIM56-202ENST00000412507 SOX15O60248 233 aa14.69□□□□□ -0.06
TRIM56-202ENST00000412507 SLC22A5O76082 557 aa14.69□□□□□ -0.06
TRIM56-202ENST00000412507 CRYZL1O95825 349 aa14.69□□□□□ -0.06
TRIM56-202ENST00000412507 CRYGBP07316 175 aa14.69□□□□□ -0.06
TRIM56-202ENST00000412507 AADACP22760 399 aa14.69□□□□□ -0.06
TRIM56-202ENST00000412507 FCGR2CP31995 323 aa14.69□□□□□ -0.06
TRIM56-202ENST00000412507 PJVKQ0ZLH3 352 aa14.69□□□□□ -0.06
TRIM56-202ENST00000412507 RCC1LQ96I51 464 aaKnown RBP14.69□□□□□ -0.06
TRIM56-202ENST00000412507 IFT46Q9NQC8 304 aa14.69□□□□□ -0.06
TRIM56-202ENST00000412507 NECAP2Q9NVZ3 263 aa14.69□□□□□ -0.06
TRIM56-202ENST00000412507 CCL24O00175 119 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 ARPC1BO15143 372 aaKnown RBP14.68□□□□□ -0.06
TRIM56-202ENST00000412507 RAB9AP51151 201 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 RORCP51449 518 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 GNB1P62873 340 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 RPL30P62888 115 aaKnown RBP14.68□□□□□ -0.06
TRIM56-202ENST00000412507 TMEM267Q0VDI3 215 aaPredicted RBP14.68□□□□□ -0.06
TRIM56-202ENST00000412507 KIAA0141Q14154 515 aaPredicted RBP14.68□□□□□ -0.06
TRIM56-202ENST00000412507 FXYD3Q14802 87 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 OR2B11Q5JQS5 317 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 FOXB2Q5VYV0 432 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 UNQ5815/PRO19632Q6UWF5 114 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 KCTD9Q7L273 389 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 ZNF491Q8N8L2 437 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 LFNGQ8NES3 379 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 OR5AP2Q8NGF4 316 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 CASTOR1Q8WTX7 329 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 SECTM1Q8WVN6 248 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 ACOT12Q8WYK0 555 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 ARPC1AQ92747 370 aa14.68□□□□□ -0.06
TRIM56-202ENST00000412507 FOXA2Q9Y261 457 aaPredicted RBP14.68□□□□□ -0.06
TRIM56-202ENST00000412507 HPGDSO60760 199 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 FCGR3BO75015 233 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 APOA1P02647 267 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 PRSS3P35030 304 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 SSBP2P81877 361 aaPredicted RBP14.67□□□□□ -0.06
TRIM56-202ENST00000412507 CDK10Q15131 360 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 AKIRIN2Q53H80 203 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 ACTBL2Q562R1 376 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 TCTEX1D1Q8N7M0 179 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 GRPEL2Q8TAA5 225 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 C4orf3Q8WVX3 66 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 UBE2E2Q96LR5 201 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 CMTM3Q96MX0 182 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 GPHA2Q96T91 129 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 GNB4Q9HAV0 340 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 CCL28Q9NRJ3 127 aa14.67□□□□□ -0.06
TRIM56-202ENST00000412507 CNIH1O95406 144 aa14.66□□□□□ -0.06
TRIM56-202ENST00000412507 PPYP01298 95 aa14.66□□□□□ -0.06
TRIM56-202ENST00000412507 ELK1P19419 428 aa14.66□□□□□ -0.06
TRIM56-202ENST00000412507 RAB25P57735 213 aa14.66□□□□□ -0.06
TRIM56-202ENST00000412507 EIF4EBP1Q13541 118 aaPredicted RBP14.66□□□□□ -0.06
TRIM56-202ENST00000412507 VMA21Q3ZAQ7 101 aa14.66□□□□□ -0.06
TRIM56-202ENST00000412507 OSR1Q8TAX0 266 aaPredicted RBP14.66□□□□□ -0.06
TRIM56-202ENST00000412507 TCTEX1D2Q8WW35 142 aa14.66□□□□□ -0.06
TRIM56-202ENST00000412507 OR5B12Q96R08 314 aa14.66□□□□□ -0.06
TRIM56-202ENST00000412507 HSD17B10Q99714 261 aaKnown RBP14.66□□□□□ -0.06
TRIM56-202ENST00000412507 DCUN1D5Q9BTE7 237 aa14.66□□□□□ -0.06
TRIM56-202ENST00000412507 ANAPC10Q9UM13 185 aa14.66□□□□□ -0.06
TRIM56-202ENST00000412507 VSIG4Q9Y279 399 aa14.66□□□□□ -0.06
TRIM56-202ENST00000412507 MRPS7Q9Y2R9 242 aaKnown RBP14.66□□□□□ -0.06
TRIM56-202ENST00000412507 PRELID3BQ9Y3B1 194 aa14.66□□□□□ -0.06
TRIM56-202ENST00000412507 SMIM31A0A1B0GVY4 71 aa14.65□□□□□ -0.06
TRIM56-202ENST00000412507 DUS4LO95620 317 aaKnown RBP14.65□□□□□ -0.06
TRIM56-202ENST00000412507 FXYD4P59646 89 aa14.65□□□□□ -0.06
TRIM56-202ENST00000412507 UBE2KP61086 200 aa14.65□□□□□ -0.06
TRIM56-202ENST00000412507 MRGPRG-AS1Q2M3A8 158 aa14.65□□□□□ -0.06
TRIM56-202ENST00000412507 IDO2Q6ZQW0 420 aa14.65□□□□□ -0.06
TRIM56-202ENST00000412507 OVCH2Q7RTZ1 564 aa14.65□□□□□ -0.06
TRIM56-202ENST00000412507 MFSD4AQ8N468 514 aa14.65□□□□□ -0.06
TRIM56-202ENST00000412507 TAS2R8Q9NYW2 309 aa14.65□□□□□ -0.06
TRIM56-202ENST00000412507 EHFQ9NZC4 300 aa14.65□□□□□ -0.06
TRIM56-202ENST00000412507 NDUFA13Q9P0J0 144 aa14.65□□□□□ -0.06
TRIM56-202ENST00000412507 I3L521 148 aa14.64□□□□□ -0.07
TRIM56-202ENST00000412507 TNFSF12O43508 249 aa14.64□□□□□ -0.07
TRIM56-202ENST00000412507 RFX2P48378 723 aa14.64□□□□□ -0.07
TRIM56-202ENST00000412507 MZT2AQ6P582 158 aa14.64□□□□□ -0.07
TRIM56-202ENST00000412507 SNX29P2Q8IUI4 249 aa14.64□□□□□ -0.07
TRIM56-202ENST00000412507 TEX45Q8NA69 505 aa14.64□□□□□ -0.07
TRIM56-202ENST00000412507 OR11H1Q8NG94 326 aa14.64□□□□□ -0.07
TRIM56-202ENST00000412507 OR5M8Q8NGP6 311 aa14.64□□□□□ -0.07
TRIM56-202ENST00000412507 GIMAP1Q8WWP7 306 aa14.64□□□□□ -0.07
TRIM56-202ENST00000412507 MS4A10Q96PG2 267 aa14.64□□□□□ -0.07
TRIM56-202ENST00000412507 SLC5A7Q9GZV3 580 aa14.64□□□□□ -0.07
TRIM56-202ENST00000412507 BATF3Q9NR55 127 aa14.64□□□□□ -0.07
TRIM56-202ENST00000412507 FAM25AB3EWG3 89 aa14.63□□□□□ -0.07
TRIM56-202ENST00000412507 FAM25CB3EWG5 89 aa14.63□□□□□ -0.07
TRIM56-202ENST00000412507 FAM25GB3EWG6 89 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms