RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 PROKR2Q8NFJ6 384 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR10G2Q8NGC3 310 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR6K6Q8NGW6 343 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR11L1Q8NGX0 322 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR8U1Q8NH10 309 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MFSD8Q8NHS3 518 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DOK4Q8TEW6 326 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 C1orf54Q8WWF1 131 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RTN4IP1Q8WWV3 396 aaPredicted RBP1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MAGOHBQ96A72 148 aaKnown RBP1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CIDECQ96AQ7 238 aaPredicted RBP1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PPCDCQ96CD2 204 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ISOC1Q96CN7 298 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 FLYWCH2Q96CP2 140 aaKnown RBP1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 NEURL3Q96EH8 262 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 L3HYPDHQ96EM0 354 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 NRBF2Q96F24 287 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CHMP6Q96FZ7 201 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 NAPGQ99747 312 aaPredicted RBP1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CHAC1Q9BUX1 264 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DPY30Q9C005 99 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TMEM27Q9HBJ8 222 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RETNQ9HD89 108 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 EXOSC4Q9NPD3 245 aaKnown RBP1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZNF355PQ9NSJ1 428 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TMEM106BQ9NUM4 274 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TAAR3PQ9P1P4 343 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ATPIF1Q9UII2 106 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RPUSD1Q9UJJ7 312 aaKnown RBP1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 GUCA1BQ9UMX6 200 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PSG8Q9UQ74 426 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ST3GAL6Q9Y274 331 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 POFUT2Q9Y2G5 429 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ARHGAP21Q5T5U3 1957 aa1.64□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DYSFO75923 2080 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DNAH1Q9P2D7 4330 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TMED7-TICAM2A0A0A6YYA0 188 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TRAV38-1A0A0B4J264 116 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 IGHV1-69DA0A0B4J2H0 117 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 A0A1B0GW55 424 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZNF705GA8MUZ8 300 aaPredicted RBP1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DNASE2O00115 360 aaPredicted RBP1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SCN2BO60939 215 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZNF324O75467 553 aaPredicted RBP1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 LY6HO94772 140 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 WISP3O95389 354 aaPredicted RBP1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 LHBP01229 141 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 IGHV1-69P01742 117 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 HLA-DQA1P01909 254 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 APCSP02743 223 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 IFNA6P05013 189 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 EIF4EP06730 217 aaKnown RBP1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DBIP07108 87 aaKnown RBP1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 IL3P08700 152 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DUX4L2P0CJ85 424 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DUX4L3P0CJ86 424 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DUX4L5P0CJ88 424 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DUX4L6P0CJ89 424 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DUX4L7P0CJ90 424 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 COX5BP10606 129 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CD79AP11912 226 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZNF14P17017 642 aaPredicted RBP1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZNF32P17041 273 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PTNP21246 168 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 COL8A2P25067 703 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 LCN2P80188 198 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 C2orf80Q0P641 193 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SKP2Q13309 424 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 EBI3Q14213 229 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MAPRE2Q15555 327 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZNF829Q3KNS6 432 aaPredicted RBP1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ARHGAP11BQ3KRB8 267 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 HIKESHIQ53FT3 197 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MPV17L2Q567V2 206 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 NOXRED1Q6NXP6 359 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 FBXW12Q6X9E4 464 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 COMTD1Q86VU5 262 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RIMKLAQ8IXN7 391 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 LRRC34Q8IZ02 419 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SLC30A7Q8NEW0 376 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR4X2Q8NGF9 303 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR52E4Q8NGH9 312 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR5M1Q8NGP8 315 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR10Z1Q8NGY1 313 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR6N1Q8NGY5 312 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR13G1Q8NGZ3 307 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ENKURQ8TC29 256 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 C16orf78Q8WTQ4 265 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 C22orf15Q8WYQ4 148 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR5P2Q8WZ92 322 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 C12orf43Q96C57 262 aaKnown RBP1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR10C1Q96KK4 312 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CCDC115Q96NT0 180 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TRNT1Q96Q11 434 aaKnown RBP1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CHCHD7Q9BUK0 85 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 C1QTNF6Q9BXI9 259 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 NDEL1Q9GZM8 345 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 METTL8Q9H825 291 aaKnown RBP1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZNF430Q9H8G1 570 aaPredicted RBP1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 EDA2RQ9HAV5 297 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms