RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 ZNF660Q6AZW8 331 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-202ENST00000336300 CMTM1Q8IZ96 169 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 MFSD4AQ8N468 514 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 OSR1Q8TAX0 266 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-202ENST00000336300 WIPF2Q8TF74 440 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-202ENST00000336300 DDB2Q92466 427 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 NOL4LQ96MY1 436 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-202ENST00000336300 HSPB9Q9BQS6 159 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 OR51J1Q9H342 316 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 CCL28Q9NRJ3 127 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 TAS2R8Q9NYW2 309 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 KLK11Q9UBX7 282 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 LINC00527Q9UJ94 153 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 A3GALT2U3KPV4 340 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 LINC01548A6NM66 108 aa12.47□□□□□ -0.41
MRPL55-202ENST00000336300 CRYZL1O95825 349 aa12.47□□□□□ -0.41
MRPL55-202ENST00000336300 IGF1P05019 195 aa12.47□□□□□ -0.41
MRPL55-202ENST00000336300 KIR2DS2P43631 304 aa12.47□□□□□ -0.41
MRPL55-202ENST00000336300 TAS2R19P59542 299 aa12.47□□□□□ -0.41
MRPL55-202ENST00000336300 TMEM267Q0VDI3 215 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-202ENST00000336300 VMA21Q3ZAQ7 101 aa12.47□□□□□ -0.41
MRPL55-202ENST00000336300 RNASE10Q5GAN6 216 aaKnown RBP12.47□□□□□ -0.41
MRPL55-202ENST00000336300 VAX1Q5SQQ9 334 aa12.47□□□□□ -0.41
MRPL55-202ENST00000336300 TEX38Q6PEX7 206 aa12.47□□□□□ -0.41
MRPL55-202ENST00000336300 ZNF329Q86UD4 541 aa12.47□□□□□ -0.41
MRPL55-202ENST00000336300 NDUFA11Q86Y39 141 aa12.47□□□□□ -0.41
MRPL55-202ENST00000336300 POC5Q8NA72 575 aa12.47□□□□□ -0.41
MRPL55-202ENST00000336300 OR4S2Q8NH73 311 aa12.47□□□□□ -0.41
MRPL55-202ENST00000336300 MOB3AQ96BX8 217 aa12.47□□□□□ -0.41
MRPL55-202ENST00000336300 CITED2Q99967 270 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-202ENST00000336300 AIFM2Q9BRQ8 373 aa12.47□□□□□ -0.41
MRPL55-202ENST00000336300 TSSC4Q9Y5U2 329 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-202ENST00000336300 IGHV7-81A0A0B4J1V7 117 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 CTDSPLO15194 276 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 TNFSF12O43508 249 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 SLC25A17O43808 307 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 TNFSF8P32971 234 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 CD83Q01151 205 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 NSUN5P1Q3KNT7 163 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 KHDC1LQ5JSQ8 128 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 ZNF562Q6V9R5 426 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 PPP1R27Q86WC6 154 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 TMEM229BQ8NBD8 167 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 ABHD5Q8WTS1 349 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 CLCC1Q96S66 551 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 PARP11Q9NR21 331 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 ZNF580Q9UK33 172 aa12.46□□□□□ -0.41
MRPL55-202ENST00000336300 CREBL2O60519 120 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-202ENST00000336300 CNIH1O95406 144 aa12.45□□□□□ -0.42
MRPL55-202ENST00000336300 GNRHRP30968 328 aa12.45□□□□□ -0.42
MRPL55-202ENST00000336300 RPL30P62888 115 aaKnown RBP12.45□□□□□ -0.42
MRPL55-202ENST00000336300 CX3CL1P78423 397 aa12.45□□□□□ -0.42
MRPL55-202ENST00000336300 DGCR2P98153 550 aa12.45□□□□□ -0.42
MRPL55-202ENST00000336300 OR2B11Q5JQS5 317 aa12.45□□□□□ -0.42
MRPL55-202ENST00000336300 ZNF818PQ6ZRF7 136 aa12.45□□□□□ -0.42
MRPL55-202ENST00000336300 TEX45Q8NA69 505 aa12.45□□□□□ -0.42
MRPL55-202ENST00000336300 OR4F17Q8NGA8 305 aa12.45□□□□□ -0.42
MRPL55-202ENST00000336300 CD300LFQ8TDQ1 290 aa12.45□□□□□ -0.42
MRPL55-202ENST00000336300 SMIM4Q8WVI0 70 aa12.45□□□□□ -0.42
MRPL55-202ENST00000336300 OR4F4Q96R69 305 aa12.45□□□□□ -0.42
MRPL55-202ENST00000336300 TET2Q6N021 2002 aaPredicted RBP12.44□□□□□ -0.42
MRPL55-202ENST00000336300 M0QYG6 137 aa12.44□□□□□ -0.42
MRPL55-202ENST00000336300 GPR31O00270 319 aa12.44□□□□□ -0.42
MRPL55-202ENST00000336300 CA2P00918 260 aa12.44□□□□□ -0.42
MRPL55-202ENST00000336300 HRASP01112 189 aa12.44□□□□□ -0.42
MRPL55-202ENST00000336300 CD3DP04234 171 aa12.44□□□□□ -0.42
MRPL55-202ENST00000336300 ELANEP08246 267 aa12.44□□□□□ -0.42
MRPL55-202ENST00000336300 UBE2KP61086 200 aa12.44□□□□□ -0.42
MRPL55-202ENST00000336300 EIF4EBP1Q13541 118 aaPredicted RBP12.44□□□□□ -0.42
MRPL55-202ENST00000336300 MEF2DQ14814 521 aa12.44□□□□□ -0.42
MRPL55-202ENST00000336300 CXorf66Q5JRM2 361 aaPredicted RBP12.44□□□□□ -0.42
MRPL55-202ENST00000336300 AADACL3Q5VUY0 350 aa12.44□□□□□ -0.42
MRPL55-202ENST00000336300 TREML4Q6UXN2 200 aa12.44□□□□□ -0.42
MRPL55-202ENST00000336300 ARRDC1Q8N5I2 433 aa12.44□□□□□ -0.42
MRPL55-202ENST00000336300 VSTM2AQ8TAG5 236 aa12.44□□□□□ -0.42
MRPL55-202ENST00000336300 ZFP57Q9NU63 452 aa12.44□□□□□ -0.42
MRPL55-202ENST00000336300 TRAV41A0A0B4J266 112 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 SRRM4A7MD48 611 aaKnown RBP12.43□□□□□ -0.42
MRPL55-202ENST00000336300 FCN1O00602 326 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 ATP6V0E1O15342 81 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 ACTL6BO94805 426 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 RAB3DO95716 219 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 IGLV2-23P01705 113 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 CD40LGP29965 261 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 GNB1P62873 340 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 FOXE3Q13461 319 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 FXYD3Q14802 87 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 STEAP1BQ6NZ63 245 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 TMEM65Q6PI78 240 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 C10orf99Q6UWK7 81 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 SLC38A6Q8IZM9 456 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 SPAG16Q8N0X2 631 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 TCTEX1D1Q8N7M0 179 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 WSB1Q9Y6I7 421 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 TRRAPQ9Y4A5 3859 aa12.43□□□□□ -0.42
MRPL55-202ENST00000336300 A0A1W2PRX2 142 aa12.42□□□□□ -0.42
MRPL55-202ENST00000336300 DPPA5A6NC42 116 aa12.42□□□□□ -0.42
MRPL55-202ENST00000336300 DISC1C4P0D8 188 aa12.42□□□□□ -0.42
MRPL55-202ENST00000336300 RBFOX2O43251 390 aaKnown RBP eCLIP12.42□□□□□ -0.42
MRPL55-202ENST00000336300 GSTZ1O43708 216 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms