RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 OR51H1Q8NH63 302 aa5.17□□□□□ -1.58
CD44-204ENST00000279452 OR4S2Q8NH73 311 aa5.17□□□□□ -1.58
CD44-204ENST00000279452 GRPEL2Q8TAA5 225 aa5.17□□□□□ -1.58
CD44-204ENST00000279452 FAM110DQ8TAY7 271 aaPredicted RBP5.17□□□□□ -1.58
CD44-204ENST00000279452 GIMAP1Q8WWP7 306 aa5.17□□□□□ -1.58
CD44-204ENST00000279452 BORCS5Q969J3 196 aa5.17□□□□□ -1.58
CD44-204ENST00000279452 ABHD1Q96SE0 405 aa5.17□□□□□ -1.58
CD44-204ENST00000279452 PHB2Q99623 299 aa5.17□□□□□ -1.58
CD44-204ENST00000279452 HSD17B10Q99714 261 aaKnown RBP5.17□□□□□ -1.58
CD44-204ENST00000279452 CITED2Q99967 270 aaPredicted RBP5.17□□□□□ -1.58
CD44-204ENST00000279452 FXYD6Q9H0Q3 95 aa5.17□□□□□ -1.58
CD44-204ENST00000279452 PLSCR3Q9NRY6 295 aa5.17□□□□□ -1.58
CD44-204ENST00000279452 WSB1Q9Y6I7 421 aa5.17□□□□□ -1.58
CD44-204ENST00000279452 TRAV41A0A0B4J266 112 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 GABARAPH6UMI1 98 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 ZNF701M0R085 212 aaPredicted RBP5.16□□□□□ -1.58
CD44-204ENST00000279452 MPPED1O15442 326 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 ACTL6BO94805 426 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 NDUFA3O95167 84 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 RAB3DO95716 219 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 TSPAN15O95858 294 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 HLA-DRB1P01911 266 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 PF4P02776 101 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 OPN1MWP04001 364 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 CD3DP04234 171 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 OPN1MW2P0DN77 364 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 OPN1MW3P0DN78 364 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 NAT1P18440 290 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 TNFSF8P32971 234 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 LGALS7P47929 136 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 INPP1P49441 399 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 TAS2R19P59542 299 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 RPL30P62888 115 aaKnown RBP5.16□□□□□ -1.58
CD44-204ENST00000279452 TNXAQ16473 311 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 PHLDA2Q53GA4 152 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 KIAA2026Q5HYC2 2103 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 CXorf66Q5JRM2 361 aaPredicted RBP5.16□□□□□ -1.58
CD44-204ENST00000279452 FAAP20Q6NZ36 180 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 TMEM65Q6PI78 240 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 ZNF66Q6ZN08 573 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 ZNF818PQ6ZRF7 136 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 SSX9Q7RTT3 188 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 OVCH2Q7RTZ1 564 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 LYSMD2Q8IV50 215 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 SPAG16Q8N0X2 631 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 MFSD4AQ8N468 514 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 ZBTB34Q8NCN2 500 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 NPBQ8NG41 125 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 SMIM4Q8WVI0 70 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 ARPC1AQ92747 370 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 MOB3AQ96BX8 217 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 R3HDM4Q96D70 268 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 RNF5Q99942 180 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 FAM103A1Q9BTL3 118 aaKnown RBP5.16□□□□□ -1.58
CD44-204ENST00000279452 TINAGL1Q9GZM7 467 aaPredicted RBP5.16□□□□□ -1.58
CD44-204ENST00000279452 WNT10AQ9GZT5 417 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 MMP27Q9H306 513 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 OR51J1Q9H342 316 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 TPSG1Q9NRR2 321 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 ZNF355PQ9NSJ1 428 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 NDUFA13Q9P0J0 144 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 RABL2AQ9UBK7 228 aaPredicted RBP5.16□□□□□ -1.58
CD44-204ENST00000279452 MTFP1Q9UDX5 166 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 ANAPC10Q9UM13 185 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 RABL2BQ9UNT1 228 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 GAB2Q9UQC2 676 aa5.16□□□□□ -1.58
CD44-204ENST00000279452 FBN1P35555 2871 aaKnown RBP5.16□□□□□ -1.58
CD44-204ENST00000279452 IGHV7-81A0A0B4J1V7 117 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 A0A1W2PN81 502 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 DPPA5A6NC42 116 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 DISC1C4P0D8 188 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 G3V318 75 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 GPR31O00270 319 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 FCN1O00602 326 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 CREBL2O60519 120 aaPredicted RBP5.15□□□□□ -1.59
CD44-204ENST00000279452 TPPPO94811 219 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 IGLV2-14P01704 120 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 AKAIN1P0CW23 69 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 SAA1P0DJI8 122 aaPredicted RBP5.15□□□□□ -1.59
CD44-204ENST00000279452 APELAP0DMC3 54 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 RPA2P15927 270 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 TBPP20226 339 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 CD40LGP29965 261 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 CHRNA7P36544 502 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 KIR2DS2P43631 304 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 ERVK-16P61578 105 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 CX3CL1P78423 397 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 FXYD3Q14802 87 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 MEF2DQ14814 521 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 TMEM177Q53S58 311 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 SPANXN2Q5MJ10 180 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 VAX1Q5SQQ9 334 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 STEAP1BQ6NZ63 245 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 LPCAT3Q6P1A2 487 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 TEX38Q6PEX7 206 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 UNQ5815/PRO19632Q6UWF5 114 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 TREML4Q6UXN2 200 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 LCNL1Q6ZST4 164 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 PPP1R27Q86WC6 154 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 NDUFA11Q86Y39 141 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms