RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 GVINP1Q7Z2Y8 2422 aa15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 IGKV1D-43A0A0B4J1Z2 117 aa15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 ISG15P05161 165 aa15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 LCN2P80188 198 aa15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 CTHRC1Q96CG8 243 aa15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 C5orf66Q9H5L9 145 aa15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 ABCA7Q8IZY2 2146 aa15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 FAM74A3Q4VXF1 159 aa15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 H1FOOQ8IZA3 346 aaPredicted RBP15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 ELOA3CA0A087WX78 387 aaPredicted RBP15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 ARL14EPLP0DKL9 152 aa15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 SLC25A33Q9BSK2 321 aa15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 FHITP49789 147 aa15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 KLF7O75840 302 aaPredicted RBP15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 EGR1P18146 543 aa15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 FAM74A4Q5TZK3 123 aa15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 ZCCHC14Q8WYQ9 949 aaKnown RBP15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 TAF15Q92804 592 aaKnown RBP eCLIP15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 DIRC3C9JPN6 131 aa15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 H0YL77 283 aa15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 Q5BKY6 102 aa15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 C1QL2Q7Z5L3 287 aa15.97■□□□□ 0.15
SMARCC1-201ENST00000254480 HOXD4P09016 255 aaPredicted RBP15.96■□□□□ 0.15
SMARCC1-201ENST00000254480 MMD2Q8IY49 270 aa15.96■□□□□ 0.15
SMARCC1-201ENST00000254480 TRGC2P03986 189 aa15.96■□□□□ 0.15
SMARCC1-201ENST00000254480 RNASE1P07998 156 aaKnown RBP15.96■□□□□ 0.15
SMARCC1-201ENST00000254480 ZNF345Q14585 488 aa15.96■□□□□ 0.15
SMARCC1-201ENST00000254480 CALHM1Q8IU99 346 aa15.96■□□□□ 0.15
SMARCC1-201ENST00000254480 FAM181BA6NEQ2 426 aa15.96■□□□□ 0.15
SMARCC1-201ENST00000254480 QTRT1Q9BXR0 403 aaKnown RBP15.96■□□□□ 0.15
SMARCC1-201ENST00000254480 TMEM56-RWDD3S4R434 201 aa15.96■□□□□ 0.15
SMARCC1-201ENST00000254480 KIAA1644Q3SXP7 199 aa15.96■□□□□ 0.15
SMARCC1-201ENST00000254480 DCTN5Q9BTE1 182 aa15.96■□□□□ 0.15
SMARCC1-201ENST00000254480 DSPPQ9NZW4 1301 aa15.96■□□□□ 0.14
SMARCC1-201ENST00000254480 TRBV5-7A0A0A0MS05 114 aa15.96■□□□□ 0.14
SMARCC1-201ENST00000254480 COMPP49747 757 aaPredicted RBP15.96■□□□□ 0.14
SMARCC1-201ENST00000254480 MEGF10Q96KG7 1140 aa15.96■□□□□ 0.14
SMARCC1-201ENST00000254480 TGFBR3LH3BV60 316 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 M0R143 59 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 UBE2L6O14933 153 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 CKS2P33552 79 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 NRIP2Q9BQI9 281 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 C7orf66A4D0T2 115 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 LINC01590Q5TEZ4 76 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 CENPVQ7Z7K6 275 aaPredicted RBP15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 MIOXQ9UGB7 285 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 BPIFA4PQ86YQ2 179 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 ZNF430Q9H8G1 570 aaPredicted RBP15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 ZDBF2Q9HCK1 2354 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 CFDP00746 253 aaPredicted RBP15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 Q96M66 194 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 CRYBB3P26998 211 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 ZNF273Q14593 569 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 APCDD1LQ8NCL9 501 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 DDB2Q92466 427 aa15.95■□□□□ 0.14
SMARCC1-201ENST00000254480 TNFRSF9Q07011 255 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 AMMECR1LQ6DCA0 310 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 H2BFSP57053 126 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 C2orf83Q53S99 150 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 STPG2Q8N412 459 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 HSPB9Q9BQS6 159 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 SYNGR3O43761 229 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 CD74P04233 296 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 SERF2P84101 59 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 ZNF660Q6AZW8 331 aaPredicted RBP15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 ZNF837Q96EG3 531 aaPredicted RBP15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 TUBD1Q9UJT1 453 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 TGIF2-C20orf24A0A0A6YYL0 155 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 TMEM177Q53S58 311 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 MFAP4P55083 255 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 C1orf100Q5SVJ3 147 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 NPIPB3Q92617 1050 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 ALX4Q9H161 411 aaPredicted RBP15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 CBY1Q9Y3M2 126 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 SPTBN2O15020 2390 aa15.94■□□□□ 0.14
SMARCC1-201ENST00000254480 FAM74A7A6NL05 159 aa15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 PTPRFP10586 1907 aa15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 LINC00862A6NCI5 91 aa15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 KBTBD11O94819 623 aa15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 DRAM1Q8N682 238 aa15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 ABHD17AQ96GS6 310 aa15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 DUX5Q96PT3 197 aa15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 CHCHD2Q9Y6H1 151 aaPredicted RBP15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 PROB1E7EW31 1015 aa15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 SRSF12Q8WXF0 261 aaKnown RBP15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 RAB24Q969Q5 203 aa15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 PKIBQ9C010 78 aa15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 CD1AP06126 327 aa15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 TP53RKQ96S44 253 aa15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 CX3CL1P78423 397 aa15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 ATP5G2Q06055 141 aa15.93■□□□□ 0.14
SMARCC1-201ENST00000254480 C1orf174Q8IYL3 243 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 MIEN1Q9BRT3 115 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 PHLDA3Q9Y5J5 127 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 CACNA1EQ15878 2313 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 MUC21A0A0G2JKD1 596 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 MUC21A0A140T8X8 626 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 A8MWL6 223 aa15.92■□□□□ 0.14
SMARCC1-201ENST00000254480 CELA3BP08861 270 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms