RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 FAM58AQ8N1B3 248 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 LHX4Q969G2 390 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 SMIM7Q9BQ49 75 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 PRRG4Q9BZD6 226 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 DEPPQ9NTK1 212 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 RYDENQ9NUL5 291 aaKnown RBP7.37□□□□□ -1.23
VCL-207ENST00000624354 SLC39A9Q9NUM3 307 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 PPP1R3CQ9UQK1 317 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 PIEZO1Q92508 2521 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 SPTAN1Q13813 2472 aaKnown RBP7.37□□□□□ -1.23
VCL-207ENST00000624354 DSPP15924 2871 aaKnown RBP7.37□□□□□ -1.23
VCL-207ENST00000624354 TRAV24A0A0B4J272 114 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 ZNF737O75373 536 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 HRASP01112 189 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 NGFP01138 241 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 IGKV1-39P01597 117 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 IGKV1D-39P04432 117 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 CYB561P49447 251 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 GFRA1P56159 465 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 ZXDAP98168 799 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 SRYQ05066 204 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 TMEM183BQ1AE95 376 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 BSXQ3C1V8 233 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 SLC35E1Q96K37 410 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 COL12A1Q99715 3063 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 ZPBPQ9BS86 351 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 WDR61Q9GZS3 305 aaKnown RBP7.37□□□□□ -1.23
VCL-207ENST00000624354 RBKSQ9H477 322 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 LIN7CQ9NUP9 197 aaKnown RBP7.37□□□□□ -1.23
VCL-207ENST00000624354 DLL3Q9NYJ7 618 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 OR6C3Q9NZP0 311 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 OR1A1Q9P1Q5 309 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 KCNS2Q9ULS6 477 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 PAM16Q9Y3D7 125 aa7.37□□□□□ -1.23
VCL-207ENST00000624354 POLEQ07864 2286 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 ICE1Q9Y2F5 2266 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 NKX6-3A6NJ46 265 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 KLF3P57682 345 aaPredicted RBP7.36□□□□□ -1.23
VCL-207ENST00000624354 GNG3P63215 75 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 PLP2Q04941 152 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 RNF151Q2KHN1 245 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 CISD2Q8N5K1 135 aaKnown RBP7.36□□□□□ -1.23
VCL-207ENST00000624354 OR2T10Q8NGZ9 312 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 OR5P3Q8WZ94 311 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 OR4C12Q96R67 309 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 ZNF407Q9C0G0 2248 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 IGKV3D-15A0A087WSY6 115 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 TMEM265A0A087WTH1 108 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 OR5B21A6NL26 309 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 IGKV1-5P01602 117 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 PRSS8Q16651 343 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 HAPLN4Q86UW8 402 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 TAF15Q92804 592 aaKnown RBP eCLIP7.36□□□□□ -1.23
VCL-207ENST00000624354 VAMP8Q9BV40 100 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 ARRDC1-AS1Q9H2J1 176 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 OR51I2Q9H344 312 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 MPC1Q9Y5U8 109 aa7.36□□□□□ -1.23
VCL-207ENST00000624354 A8MXE2 369 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 NPIPB11E5RHQ5 1161 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 WDR1O75083 606 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 ARR3P36575 388 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 SLC38A11Q08AI6 406 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 Q0VFX4 171 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 CYP2G1PQ6ZSU1 146 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 C1orf210Q8IVY1 113 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 TUSC5Q8IXB3 177 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 TMEM256Q8N2U0 113 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 PARD6GQ9BYG4 376 aaPredicted RBP7.35□□□□□ -1.23
VCL-207ENST00000624354 TMEM9BQ9NQ34 198 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 BOKQ9UMX3 212 aaPredicted RBP7.35□□□□□ -1.23
VCL-207ENST00000624354 ROS1P08922 2347 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 UBE2L5PA0A1B0GUS4 154 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 PINLYPA6NC86 204 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 AQP7O14520 342 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 CCL25O15444 150 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 NXPH2O95156 264 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 TDGF1P13385 188 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 FOXG1P55316 489 aaPredicted RBP7.35□□□□□ -1.23
VCL-207ENST00000624354 MEF2BQ02080 365 aaPredicted RBP7.35□□□□□ -1.23
VCL-207ENST00000624354 TDRG1Q3Y452 100 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 MOB1BQ7L9L4 216 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 PPP1R32Q7Z5V6 425 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 OR1K1Q8NGR3 316 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 POM121L2Q96KW2 1035 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 IMMP2LQ96T52 175 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 NCOR1P1Q9H4R4 102 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 TMEM106BQ9NUM4 274 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 AURKAIP1Q9NWT8 199 aaPredicted RBP7.35□□□□□ -1.23
VCL-207ENST00000624354 TRAPPC2LQ9UL33 140 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 ATRXP46100 2492 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 YLPM1P49750 1951 aaKnown RBP7.35□□□□□ -1.23
VCL-207ENST00000624354 KIAA1549Q9HCM3 1950 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.35□□□□□ -1.23
VCL-207ENST00000624354 NTN3O00634 580 aaPredicted RBP7.35□□□□□ -1.23
VCL-207ENST00000624354 SYNGR4O95473 234 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 TMEM11P17152 192 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 CEACAM8P31997 349 aaPredicted RBP7.35□□□□□ -1.23
VCL-207ENST00000624354 PSMB3P49720 205 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 TESK1Q15569 626 aa7.35□□□□□ -1.23
VCL-207ENST00000624354 ZNF585BQ52M93 769 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 196.3 ms