RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 AGMATQ9BSE5 352 aa13.3□□□□□ -0.28
RETREG3-210ENST00000590541 IGHV7-81A0A0B4J1V7 117 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 TRAV41A0A0B4J266 112 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 METTL21EPA6NDL7 271 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 TRDCB7Z8K6 153 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 ST8SIA5O15466 376 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 SOX15O60248 233 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 NDUFA3O95167 84 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 LGALS1P09382 135 aaKnown RBP13.29□□□□□ -0.28
RETREG3-210ENST00000590541 CD3GP09693 182 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 FGF9P31371 208 aaPredicted RBP13.29□□□□□ -0.28
RETREG3-210ENST00000590541 PITPNAQ00169 270 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 ARL6IP1Q15041 203 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 C5orf64Q2M2E5 130 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 HES5Q5TA89 166 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 LIN54Q6MZP7 749 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 OR4A4PQ8NGN8 299 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 HDHD3Q9BSH5 251 aaPredicted RBP13.29□□□□□ -0.28
RETREG3-210ENST00000590541 PARP11Q9NR21 331 aa13.29□□□□□ -0.28
RETREG3-210ENST00000590541 IGLV1-51P01701 117 aa13.28□□□□□ -0.28
RETREG3-210ENST00000590541 IFNA6P05013 189 aa13.28□□□□□ -0.28
RETREG3-210ENST00000590541 PLAC9Q5JTB6 97 aa13.28□□□□□ -0.28
RETREG3-210ENST00000590541 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.28□□□□□ -0.28
RETREG3-210ENST00000590541 OR10R2Q8NGX6 335 aa13.28□□□□□ -0.28
RETREG3-210ENST00000590541 RITA1Q96K30 269 aa13.28□□□□□ -0.28
RETREG3-210ENST00000590541 C11orf54Q9H0W9 315 aaPredicted RBP13.28□□□□□ -0.28
RETREG3-210ENST00000590541 ZNF221Q9UK13 617 aa13.28□□□□□ -0.28
RETREG3-210ENST00000590541 FRAS1Q86XX4 4008 aa13.28□□□□□ -0.28
RETREG3-210ENST00000590541 SCTP09683 121 aa13.27□□□□□ -0.29
RETREG3-210ENST00000590541 CT45A6P0DMU7 189 aa13.27□□□□□ -0.29
RETREG3-210ENST00000590541 CT45A5P0DMU8 189 aa13.27□□□□□ -0.29
RETREG3-210ENST00000590541 CT45A7P0DMV0 189 aa13.27□□□□□ -0.29
RETREG3-210ENST00000590541 CNTFRP26992 372 aa13.27□□□□□ -0.29
RETREG3-210ENST00000590541 C19orf54Q5BKX5 351 aa13.27□□□□□ -0.29
RETREG3-210ENST00000590541 FAM131AQ6UXB0 335 aa13.27□□□□□ -0.29
RETREG3-210ENST00000590541 TPRA1Q86W33 373 aa13.27□□□□□ -0.29
RETREG3-210ENST00000590541 SPARTQ8N0X7 666 aa13.27□□□□□ -0.29
RETREG3-210ENST00000590541 OR5AN1Q8NGI8 311 aa13.27□□□□□ -0.29
RETREG3-210ENST00000590541 CASTOR1Q8WTX7 329 aa13.27□□□□□ -0.29
RETREG3-210ENST00000590541 WASHC3Q9Y3C0 194 aa13.27□□□□□ -0.29
RETREG3-210ENST00000590541 H0YJW9 148 aa13.26□□□□□ -0.29
RETREG3-210ENST00000590541 GSTP1P09211 210 aaKnown RBP13.26□□□□□ -0.29
RETREG3-210ENST00000590541 NDPQ00604 133 aa13.26□□□□□ -0.29
RETREG3-210ENST00000590541 RPL39P5Q59GN2 51 aa13.26□□□□□ -0.29
RETREG3-210ENST00000590541 ZNF660Q6AZW8 331 aaPredicted RBP13.26□□□□□ -0.29
RETREG3-210ENST00000590541 C22orf42Q6IC83 251 aa13.26□□□□□ -0.29
RETREG3-210ENST00000590541 IL17DQ8TAD2 202 aa13.26□□□□□ -0.29
RETREG3-210ENST00000590541 ABHD14BQ96IU4 210 aa13.26□□□□□ -0.29
RETREG3-210ENST00000590541 OR1A1Q9P1Q5 309 aa13.26□□□□□ -0.29
RETREG3-210ENST00000590541 STUB1Q9UNE7 303 aa13.26□□□□□ -0.29
RETREG3-210ENST00000590541 GAB2Q9UQC2 676 aa13.26□□□□□ -0.29
RETREG3-210ENST00000590541 KCNK7Q9Y2U2 307 aa13.26□□□□□ -0.29
RETREG3-210ENST00000590541 FBXO7Q9Y3I1 522 aa13.26□□□□□ -0.29
RETREG3-210ENST00000590541 A0A1W2PN81 502 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 SHISA3A0PJX4 238 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 H7C2Y5 167 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 RAB27BO00194 218 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 RRHO14718 337 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 FABP7O15540 132 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 SCGNO76038 276 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 FCGR3AP08637 254 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 HIST1H1DP16402 221 aaKnown RBP13.25□□□□□ -0.29
RETREG3-210ENST00000590541 PSMB9P28065 219 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 CHRNA7P36544 502 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 CRIP2P52943 208 aaPredicted RBP13.25□□□□□ -0.29
RETREG3-210ENST00000590541 OR10A3P58181 314 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 ECSCRQ19T08 205 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 TCTEX1D1Q8N7M0 179 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 CABLES2Q9BTV7 478 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 PARP12Q9H0J9 701 aaKnown RBP13.25□□□□□ -0.29
RETREG3-210ENST00000590541 RETNQ9HD89 108 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 RDH8Q9NYR8 311 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 SSR3Q9UNL2 185 aa13.25□□□□□ -0.29
RETREG3-210ENST00000590541 NOTOA8MTQ0 251 aa13.24□□□□□ -0.29
RETREG3-210ENST00000590541 MFNGO00587 321 aa13.24□□□□□ -0.29
RETREG3-210ENST00000590541 SPDEFO95238 335 aa13.24□□□□□ -0.29
RETREG3-210ENST00000590541 IGHV3-11P01762 117 aa13.24□□□□□ -0.29
RETREG3-210ENST00000590541 HSPB1P04792 205 aaKnown RBP13.24□□□□□ -0.29
RETREG3-210ENST00000590541 TFAP2AP05549 437 aa13.24□□□□□ -0.29
RETREG3-210ENST00000590541 TAGLNQ01995 201 aaKnown RBP13.24□□□□□ -0.29
RETREG3-210ENST00000590541 TMEM267Q0VDI3 215 aaPredicted RBP13.24□□□□□ -0.29
RETREG3-210ENST00000590541 PLGLAQ15195 96 aa13.24□□□□□ -0.29
RETREG3-210ENST00000590541 Q6ZS49 121 aa13.24□□□□□ -0.29
RETREG3-210ENST00000590541 OR10J5Q8NHC4 309 aa13.24□□□□□ -0.29
RETREG3-210ENST00000590541 FLYWCH2Q96CP2 140 aaKnown RBP13.24□□□□□ -0.29
RETREG3-210ENST00000590541 TSNAXQ99598 290 aaKnown RBP13.24□□□□□ -0.29
RETREG3-210ENST00000590541 RSRP1Q9BUV0 290 aa13.24□□□□□ -0.29
RETREG3-210ENST00000590541 TXNL4BQ9NX01 149 aaKnown RBP13.24□□□□□ -0.29
RETREG3-210ENST00000590541 RNF150Q9ULK6 438 aa13.24□□□□□ -0.29
RETREG3-210ENST00000590541 TRBV6-7A0A0A0MS04 114 aa13.23□□□□□ -0.29
RETREG3-210ENST00000590541 IGKV1-6A0A0C4DH72 117 aa13.23□□□□□ -0.29
RETREG3-210ENST00000590541 RBMY1BA6NDE4 496 aaKnown RBP13.23□□□□□ -0.29
RETREG3-210ENST00000590541 RBMY1EA6NEQ0 496 aaKnown RBP13.23□□□□□ -0.29
RETREG3-210ENST00000590541 APOA2P02652 100 aa13.23□□□□□ -0.29
RETREG3-210ENST00000590541 RBMY1DP0C7P1 496 aaKnown RBP13.23□□□□□ -0.29
RETREG3-210ENST00000590541 GNB3P16520 340 aa13.23□□□□□ -0.29
RETREG3-210ENST00000590541 TALDO1P37837 337 aa13.23□□□□□ -0.29
RETREG3-210ENST00000590541 PLA2G7Q13093 441 aa13.23□□□□□ -0.29
RETREG3-210ENST00000590541 ARFRP1Q13795 201 aa13.23□□□□□ -0.29
RETREG3-210ENST00000590541 MOGAT2Q3SYC2 334 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms