RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 ATP5J2P56134 94 aa-0.41□□□□□ -2.48
CASC4-211ENST00000561305 HSP90AA4PQ58FG1 418 aa-0.41□□□□□ -2.48
CASC4-211ENST00000561305 TEX36Q5VZQ5 186 aa-0.41□□□□□ -2.48
CASC4-211ENST00000561305 OR5P2Q8WZ92 322 aa-0.41□□□□□ -2.48
CASC4-211ENST00000561305 TAMM41Q96BW9 452 aa-0.41□□□□□ -2.48
CASC4-211ENST00000561305 MYCBPQ99417 103 aaPredicted RBP-0.41□□□□□ -2.48
CASC4-211ENST00000561305 GNB1LQ9BYB4 327 aa-0.41□□□□□ -2.48
CASC4-211ENST00000561305 EIF4G1Q04637 1599 aaKnown RBP-0.41□□□□□ -2.48
CASC4-211ENST00000561305 PTPRSQ13332 1948 aa-0.42□□□□□ -2.48
CASC4-211ENST00000561305 M0QYV0 167 aa-0.42□□□□□ -2.48
CASC4-211ENST00000561305 CASC3O15234 703 aaKnown RBP-0.42□□□□□ -2.48
CASC4-211ENST00000561305 RCVRNP35243 200 aa-0.42□□□□□ -2.48
CASC4-211ENST00000561305 GTF2BQ00403 316 aa-0.42□□□□□ -2.48
CASC4-211ENST00000561305 GNA12Q03113 381 aa-0.42□□□□□ -2.48
CASC4-211ENST00000561305 MRAP2Q96G30 205 aa-0.42□□□□□ -2.48
CASC4-211ENST00000561305 SETD5Q9C0A6 1442 aa-0.42□□□□□ -2.48
CASC4-211ENST00000561305 ANKRD17O75179 2603 aaKnown RBP-0.43□□□□□ -2.48
CASC4-211ENST00000561305 GSTTP1A0A1W2PQM5 241 aa-0.43□□□□□ -2.48
CASC4-211ENST00000561305 TRIM64CA6NLI5 447 aa-0.43□□□□□ -2.48
CASC4-211ENST00000561305 H7C2G1 150 aa-0.43□□□□□ -2.48
CASC4-211ENST00000561305 CRXO43186 299 aaPredicted RBP-0.43□□□□□ -2.48
CASC4-211ENST00000561305 MT-CO2P00403 227 aa-0.43□□□□□ -2.48
CASC4-211ENST00000561305 PSMB8P28062 276 aa-0.43□□□□□ -2.48
CASC4-211ENST00000561305 ETV1P50549 477 aa-0.43□□□□□ -2.48
CASC4-211ENST00000561305 TPI1P60174 286 aa-0.43□□□□□ -2.48
CASC4-211ENST00000561305 USF2Q15853 346 aaPredicted RBP-0.43□□□□□ -2.48
CASC4-211ENST00000561305 ZNF705AQ6ZN79 300 aaPredicted RBP-0.43□□□□□ -2.48
CASC4-211ENST00000561305 UMODL1-AS1Q8N2C9 162 aa-0.43□□□□□ -2.48
CASC4-211ENST00000561305 C12orf29Q8N999 325 aa-0.43□□□□□ -2.48
CASC4-211ENST00000561305 LINC00526Q96FQ7 95 aa-0.43□□□□□ -2.48
CASC4-211ENST00000561305 OBSCN-AS1Q96MR7 158 aa-0.43□□□□□ -2.48
CASC4-211ENST00000561305 TRABDQ9H4I3 376 aa-0.43□□□□□ -2.48
CASC4-211ENST00000561305 RABL2BQ9UNT1 228 aa-0.43□□□□□ -2.48
CASC4-211ENST00000561305 TIMM9Q9Y5J7 89 aa-0.43□□□□□ -2.48
CASC4-211ENST00000561305 TNRC6AQ8NDV7 1962 aaKnown RBP-0.44□□□□□ -2.48
CASC4-211ENST00000561305 CHD5Q8TDI0 1954 aa-0.44□□□□□ -2.48
CASC4-211ENST00000561305 IBA57-AS1B1ANH7 110 aa-0.44□□□□□ -2.48
CASC4-211ENST00000561305 GPR171O14626 319 aa-0.44□□□□□ -2.48
CASC4-211ENST00000561305 HSPA9P38646 679 aaKnown RBP-0.44□□□□□ -2.48
CASC4-211ENST00000561305 GABRA2P47869 451 aa-0.44□□□□□ -2.48
CASC4-211ENST00000561305 MIAQ16674 131 aa-0.44□□□□□ -2.48
CASC4-211ENST00000561305 SCGB1D4Q6XE38 83 aa-0.44□□□□□ -2.48
CASC4-211ENST00000561305 DAND5Q8N907 189 aa-0.44□□□□□ -2.48
CASC4-211ENST00000561305 ACY3Q96HD9 319 aa-0.44□□□□□ -2.48
CASC4-211ENST00000561305 TMEM222Q9H0R3 208 aa-0.44□□□□□ -2.48
CASC4-211ENST00000561305 RBM7Q9Y580 266 aaKnown RBP-0.44□□□□□ -2.48
CASC4-211ENST00000561305 RP1P56715 2156 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 TRAV7A0A075B6U4 112 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 TRBV6-7A0A0A0MS04 114 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 GOLGA8IPA6NC78 632 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 OR51F1A6NGY5 319 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 C19orf84I3L1E1 186 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 DEFA4P12838 97 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 OR10J1P30954 320 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 CRATP43155 626 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 TAS2R20P59543 309 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 SRSF6Q13247 344 aaKnown RBP-0.45□□□□□ -2.48
CASC4-211ENST00000561305 TMEM86AQ8N2M4 240 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 ZNF675Q8TD23 568 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 TTTY13Q9BZ97 58 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 IFT46Q9NQC8 304 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 UBQLN4Q9NRR5 601 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 POLR3HQ9Y535 204 aaPredicted RBP-0.45□□□□□ -2.48
CASC4-211ENST00000561305 SNX10Q9Y5X0 201 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 TNCP24821 2201 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 TONSLQ96HA7 1378 aa-0.45□□□□□ -2.48
CASC4-211ENST00000561305 LOC110117498A0A087WWA1 95 aa-0.46□□□□□ -2.48
CASC4-211ENST00000561305 A0A087WX48 190 aa-0.46□□□□□ -2.48
CASC4-211ENST00000561305 MEIS3P1A6NDR6 274 aa-0.46□□□□□ -2.48
CASC4-211ENST00000561305 GSTZ1O43708 216 aaPredicted RBP-0.46□□□□□ -2.48
CASC4-211ENST00000561305 LGALS1P09382 135 aaKnown RBP-0.46□□□□□ -2.48
CASC4-211ENST00000561305 CA5AP35218 305 aa-0.46□□□□□ -2.48
CASC4-211ENST00000561305 CA7P43166 264 aa-0.46□□□□□ -2.48
CASC4-211ENST00000561305 VSNL1P62760 191 aa-0.46□□□□□ -2.48
CASC4-211ENST00000561305 CIRBPQ14011 172 aaKnown RBP-0.46□□□□□ -2.48
CASC4-211ENST00000561305 SSX6Q7RTT6 188 aa-0.46□□□□□ -2.48
CASC4-211ENST00000561305 SLC22A24Q8N4F4 322 aa-0.46□□□□□ -2.48
CASC4-211ENST00000561305 RNASE6Q93091 150 aaKnown RBP-0.46□□□□□ -2.48
CASC4-211ENST00000561305 TMA16Q96EY4 203 aaKnown RBP-0.46□□□□□ -2.48
CASC4-211ENST00000561305 IMMP2LQ96T52 175 aa-0.46□□□□□ -2.48
CASC4-211ENST00000561305 LHFPL6Q9Y693 200 aa-0.46□□□□□ -2.48
CASC4-211ENST00000561305 CHD2O14647 1828 aaKnown RBP-0.47□□□□□ -2.48
CASC4-211ENST00000561305 SIPA1L1O43166 1804 aa-0.47□□□□□ -2.48
CASC4-211ENST00000561305 A0A087WUU8 490 aa-0.47□□□□□ -2.48
CASC4-211ENST00000561305 A0A0J9YW62 118 aa-0.47□□□□□ -2.48
CASC4-211ENST00000561305 EFCAB9A8MZ26 197 aa-0.47□□□□□ -2.48
CASC4-211ENST00000561305 H0YIV9 168 aa-0.47□□□□□ -2.48
CASC4-211ENST00000561305 HIST1H4AP62805 103 aaKnown RBP-0.47□□□□□ -2.48
CASC4-211ENST00000561305 MGAT3Q09327 533 aa-0.47□□□□□ -2.48
CASC4-211ENST00000561305 OR2Y1Q8NGV0 311 aa-0.47□□□□□ -2.48
CASC4-211ENST00000561305 AGR3Q8TD06 166 aa-0.47□□□□□ -2.48
CASC4-211ENST00000561305 TNFAIP8L1Q8WVP5 186 aa-0.47□□□□□ -2.48
CASC4-211ENST00000561305 SFRP2Q96HF1 295 aa-0.47□□□□□ -2.48
CASC4-211ENST00000561305 DICER1Q9UPY3 1922 aaKnown RBP-0.47□□□□□ -2.48
CASC4-211ENST00000561305 TTC41PQ6P2S7 1318 aa-0.47□□□□□ -2.48
CASC4-211ENST00000561305 FLT4P35916 1363 aa-0.47□□□□□ -2.49
CASC4-211ENST00000561305 LRP1Q07954 4544 aaKnown RBP-0.48□□□□□ -2.49
CASC4-211ENST00000561305 GREB1Q4ZG55 1949 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 GOLGA6L10A6NI86 522 aa-0.48□□□□□ -2.49
CASC4-211ENST00000561305 COCHO43405 550 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms