RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 SOX21Q9Y651 276 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-221ENST00000555773 TIMM23O14925 209 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 MPPED1O15442 326 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 B3GALNT1O75752 331 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 FAM106CPP0CH98 169 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 PIGPP57054 158 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 BAMBIQ13145 260 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 LRRC75BQ2VPJ9 315 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 C11orf88Q6PI97 169 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 ZNF383Q8NA42 475 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 DRAXINQ8NBI3 349 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-221ENST00000555773 ENKURQ8TC29 256 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 CD300LFQ8TDQ1 290 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 CFHR4Q92496 578 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 SSX3Q99909 188 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 C5orf66Q9H5L9 145 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 SLC2A9Q9NRM0 540 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 VSIG4Q9Y279 399 aa10.04□□□□□ -0.8
SHMT2-221ENST00000555773 H0YJW9 148 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 APOA2P02652 100 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 PI3P19957 117 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 F2RP25116 425 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 KIR2DS2P43631 304 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 IER3P46695 156 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 RAB13P51153 203 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 TAS2R31P59538 309 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 EBI3Q14213 229 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 PHLDA2Q53GA4 152 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 NRARPQ7Z6K4 114 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 TMEM86BQ8N661 226 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 OR5R1Q8NH85 324 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 ZNF418Q8TF45 676 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-221ENST00000555773 ZFAND2BQ8WV99 257 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 TCTEX1D2Q8WW35 142 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 SSMEM1Q8WWF3 244 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 DDB2Q92466 427 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 RNF5Q99942 180 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 ALX4Q9H161 411 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-221ENST00000555773 FAM212BQ9NTI7 297 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-221ENST00000555773 KCNIP3Q9Y2W7 256 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 WASHC3Q9Y3C0 194 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 NUBP2Q9Y5Y2 271 aa10.03□□□□□ -0.8
SHMT2-221ENST00000555773 TEX13DA0A0J9YY54 714 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-221ENST00000555773 BTBD17A6NE02 478 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 LINC00473A8K010 186 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 RBFOX2O43251 390 aaKnown RBP eCLIP10.02□□□□□ -0.815e-15■■■■■ 33.3
SHMT2-221ENST00000555773 TNFSF12O43508 249 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 PTTG1O95997 202 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 RLN1P04808 185 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 UBE2MP61081 183 aaKnown RBP10.02□□□□□ -0.81
SHMT2-221ENST00000555773 RPL30P62888 115 aaKnown RBP10.02□□□□□ -0.81
SHMT2-221ENST00000555773 CBX3Q13185 183 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 RTL8BQ17RB0 113 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 TMEM128Q5BJH2 165 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 DHRS7BQ6IAN0 325 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-221ENST00000555773 TBC1D26Q86UD7 250 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 SLC25A42Q86VD7 318 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 PDPNQ86YL7 162 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 SGPP2Q8IWX5 399 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 CENPSQ8N2Z9 138 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 SIGLECL1Q8N7X8 197 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 OR2T10Q8NGZ9 312 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 PIFOQ8TCI5 191 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 CAPSLQ8WWF8 208 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 ZNF48Q96MX3 618 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-221ENST00000555773 OCEL1Q9H607 264 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 SLC35D1Q9NTN3 355 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 LIN7CQ9NUP9 197 aaKnown RBP10.02□□□□□ -0.81
SHMT2-221ENST00000555773 PITPNC1Q9UKF7 332 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 POMT1Q9Y6A1 747 aa10.02□□□□□ -0.81
SHMT2-221ENST00000555773 NSD1Q96L73 2696 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-221ENST00000555773 FN1P02751 2386 aaKnown RBP10.02□□□□□ -0.81
SHMT2-221ENST00000555773 A0A0A6YYJ9 748 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 IGHV3-72A0A0B4J1Y9 119 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 C3orf85A0A1B0GTC6 90 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 MDFIC2A0A1B0GVS7 189 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 CRYM-AS1A6NIL9 109 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 H7C2Y5 167 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 VENTXO95231 258 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 MOSP00540 346 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 H2AFB2P0C5Z0 115 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 AKR1C4P17516 323 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 PAX6P26367 422 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 LGALS7P47929 136 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 RAG2P55895 527 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 LINC00205P59089 165 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 DHODHQ02127 395 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 RGS21Q2M5E4 152 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 PLET1Q6UQ28 207 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 GLDNQ6ZMI3 551 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-221ENST00000555773 TMED4Q7Z7H5 227 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 SPAG16Q8N0X2 631 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 ADAD2Q8NCV1 583 aaKnown RBP10.01□□□□□ -0.81
SHMT2-221ENST00000555773 OR8H1Q8NGG4 311 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 OR4C13Q8NGP0 309 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 OR51H1Q8NH63 302 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 FLYWCH2Q96CP2 140 aaKnown RBP10.01□□□□□ -0.81
SHMT2-221ENST00000555773 GALNT14Q96FL9 552 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 JMJD8Q96S16 334 aa10.01□□□□□ -0.81
SHMT2-221ENST00000555773 AIFM2Q9BRQ8 373 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms