RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 LINC00482Q8N8I6 264 aa16.04■□□□□ 0.16
VTI1B-205ENST00000555543 RNF5Q99942 180 aa16.04■□□□□ 0.16
VTI1B-205ENST00000555543 TPSG1Q9NRR2 321 aa16.04■□□□□ 0.16
VTI1B-205ENST00000555543 SLC35D1Q9NTN3 355 aa16.04■□□□□ 0.16
VTI1B-205ENST00000555543 PTHLHP12272 177 aa16.03■□□□□ 0.16
VTI1B-205ENST00000555543 NFYAP23511 347 aaPredicted RBP16.03■□□□□ 0.16
VTI1B-205ENST00000555543 PSMB8P28062 276 aa16.03■□□□□ 0.16
VTI1B-205ENST00000555543 PPIFP30405 207 aaKnown RBP16.03■□□□□ 0.16
VTI1B-205ENST00000555543 THBS3P49746 956 aa16.03■□□□□ 0.16
VTI1B-205ENST00000555543 NCS1P62166 190 aa16.03■□□□□ 0.16
VTI1B-205ENST00000555543 CX3CL1P78423 397 aa16.03■□□□□ 0.16
VTI1B-205ENST00000555543 PLGLAQ15195 96 aa16.03■□□□□ 0.16
VTI1B-205ENST00000555543 MRPL41Q8IXM3 137 aaKnown RBP16.03■□□□□ 0.16
VTI1B-205ENST00000555543 OR13F1Q8NGS4 319 aa16.03■□□□□ 0.16
VTI1B-205ENST00000555543 DUX3Q96PT4 197 aa16.03■□□□□ 0.16
VTI1B-205ENST00000555543 METTL1Q9UBP6 276 aaKnown RBP16.03■□□□□ 0.16
VTI1B-205ENST00000555543 RBM7Q9Y580 266 aaKnown RBP16.03■□□□□ 0.16
VTI1B-205ENST00000555543 A0A0A6YYH2 397 aa16.02■□□□□ 0.16
VTI1B-205ENST00000555543 TRAV41A0A0B4J266 112 aa16.02■□□□□ 0.16
VTI1B-205ENST00000555543 A6NJ64 397 aa16.02■□□□□ 0.16
VTI1B-205ENST00000555543 J3QRK9 145 aa16.02■□□□□ 0.16
VTI1B-205ENST00000555543 TMEM127O75204 238 aa16.02■□□□□ 0.16
VTI1B-205ENST00000555543 OR5H8P0DN80 308 aa16.02■□□□□ 0.16
VTI1B-205ENST00000555543 RPS16P62249 146 aaKnown RBP16.02■□□□□ 0.16
VTI1B-205ENST00000555543 C19orf54Q5BKX5 351 aa16.02■□□□□ 0.16
VTI1B-205ENST00000555543 CNIH2Q6PI25 160 aa16.02■□□□□ 0.16
VTI1B-205ENST00000555543 CROCCP3Q8IVE0 287 aa16.02■□□□□ 0.16
VTI1B-205ENST00000555543 GVQW1Q8N7I0 195 aa16.02■□□□□ 0.16
VTI1B-205ENST00000555543 CLCC1Q96S66 551 aa16.02■□□□□ 0.16
VTI1B-205ENST00000555543 AUNIPQ9H7T9 357 aa16.02■□□□□ 0.16
VTI1B-205ENST00000555543 BATF3Q9NR55 127 aa16.02■□□□□ 0.16
VTI1B-205ENST00000555543 ANXA10Q9UJ72 324 aa16.02■□□□□ 0.16
VTI1B-205ENST00000555543 SLC25A17O43808 307 aa16.01■□□□□ 0.15
VTI1B-205ENST00000555543 SPDEFO95238 335 aa16.01■□□□□ 0.15
VTI1B-205ENST00000555543 EGR2P11161 476 aaPredicted RBP16.01■□□□□ 0.15
VTI1B-205ENST00000555543 SLC6A1P30531 599 aa16.01■□□□□ 0.15
VTI1B-205ENST00000555543 CRIP2P52943 208 aaPredicted RBP16.01■□□□□ 0.15
VTI1B-205ENST00000555543 ECSCRQ19T08 205 aa16.01■□□□□ 0.15
VTI1B-205ENST00000555543 DEFB136Q30KP8 78 aa16.01■□□□□ 0.15
VTI1B-205ENST00000555543 ZNF660Q6AZW8 331 aaPredicted RBP16.01■□□□□ 0.15
VTI1B-205ENST00000555543 MYOZ3Q8TDC0 251 aa16.01■□□□□ 0.15
VTI1B-205ENST00000555543 FLYWCH2Q96CP2 140 aaKnown RBP16.01■□□□□ 0.15
VTI1B-205ENST00000555543 RAX2Q96IS3 184 aa16.01■□□□□ 0.15
VTI1B-205ENST00000555543 P2RX4Q99571 388 aa16.01■□□□□ 0.15
VTI1B-205ENST00000555543 TSNAXQ99598 290 aaKnown RBP16.01■□□□□ 0.15
VTI1B-205ENST00000555543 KLK15Q9H2R5 256 aa16.01■□□□□ 0.15
VTI1B-205ENST00000555543 OR2W1Q9Y3N9 320 aa16.01■□□□□ 0.15
VTI1B-205ENST00000555543 IGKV1D-13A0A0B4J2D9 117 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 LINC00473A8K010 186 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 CA2P00918 260 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 IGLV1-40P01703 118 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 IGLV2-23P01705 113 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 CTXN2P0C2S0 81 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 IGKV1-13P0DP09 117 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 DUTP33316 252 aaKnown RBP16■□□□□ 0.15
VTI1B-205ENST00000555543 RPL5P46777 297 aaKnown RBP16■□□□□ 0.15
VTI1B-205ENST00000555543 CDX1P47902 265 aaPredicted RBP16■□□□□ 0.15
VTI1B-205ENST00000555543 VBP1P61758 197 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 MINDY2Q8NBR6 621 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 BVESQ8NE79 360 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 BEST4Q8NFU0 473 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 DDB2Q92466 427 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 SLC25A46Q96AG3 418 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 DIABLOQ9NR28 239 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 A3GALT2U3KPV4 340 aa16■□□□□ 0.15
VTI1B-205ENST00000555543 SOX15O60248 233 aa15.99■□□□□ 0.15
VTI1B-205ENST00000555543 HLA-DQB1P01920 261 aa15.99■□□□□ 0.15
VTI1B-205ENST00000555543 FCER2P06734 321 aa15.99■□□□□ 0.15
VTI1B-205ENST00000555543 MYCNOSP40205 109 aa15.99■□□□□ 0.15
VTI1B-205ENST00000555543 SSBP2P81877 361 aaPredicted RBP15.99■□□□□ 0.15
VTI1B-205ENST00000555543 KIAA0141Q14154 515 aaPredicted RBP15.99■□□□□ 0.15
VTI1B-205ENST00000555543 UBE2NLQ5JXB2 153 aa15.99■□□□□ 0.15
VTI1B-205ENST00000555543 FOXB2Q5VYV0 432 aa15.99■□□□□ 0.15
VTI1B-205ENST00000555543 HOGA1Q86XE5 327 aa15.99■□□□□ 0.15
VTI1B-205ENST00000555543 SAMD12Q8N8I0 201 aa15.99■□□□□ 0.15
VTI1B-205ENST00000555543 HARBI1Q96MB7 349 aa15.99■□□□□ 0.15
VTI1B-205ENST00000555543 FAM103A1Q9BTL3 118 aaKnown RBP15.99■□□□□ 0.15
VTI1B-205ENST00000555543 NAA50Q9GZZ1 169 aaKnown RBP15.99■□□□□ 0.15
VTI1B-205ENST00000555543 XRCC3O43542 346 aa15.98■□□□□ 0.15
VTI1B-205ENST00000555543 TUSC2O75896 110 aa15.98■□□□□ 0.15
VTI1B-205ENST00000555543 IGLV2-14P01704 120 aa15.98■□□□□ 0.15
VTI1B-205ENST00000555543 ALDH3B2P48448 385 aa15.98■□□□□ 0.15
VTI1B-205ENST00000555543 LUMP51884 338 aaPredicted RBP15.98■□□□□ 0.15
VTI1B-205ENST00000555543 TMEM177Q53S58 311 aa15.98■□□□□ 0.15
VTI1B-205ENST00000555543 ZNF645Q8N7E2 425 aa15.98■□□□□ 0.15
VTI1B-205ENST00000555543 ABHD5Q8WTS1 349 aa15.98■□□□□ 0.15
VTI1B-205ENST00000555543 SNAPC3Q92966 411 aa15.98■□□□□ 0.15
VTI1B-205ENST00000555543 RCC1LQ96I51 464 aaKnown RBP15.98■□□□□ 0.15
VTI1B-205ENST00000555543 NUBP2Q9Y5Y2 271 aa15.98■□□□□ 0.15
VTI1B-205ENST00000555543 A0A1W2PN81 502 aa15.97■□□□□ 0.15
VTI1B-205ENST00000555543 MEIS3P1A6NDR6 274 aa15.97■□□□□ 0.15
VTI1B-205ENST00000555543 SRRM4A7MD48 611 aaKnown RBP15.97■□□□□ 0.15
VTI1B-205ENST00000555543 CCL24O00175 119 aa15.97■□□□□ 0.15
VTI1B-205ENST00000555543 ARPC1BO15143 372 aaKnown RBP15.97■□□□□ 0.15
VTI1B-205ENST00000555543 CRYGBP07316 175 aa15.97■□□□□ 0.15
VTI1B-205ENST00000555543 CHRNA7P36544 502 aa15.97■□□□□ 0.15
VTI1B-205ENST00000555543 PJVKQ0ZLH3 352 aa15.97■□□□□ 0.15
VTI1B-205ENST00000555543 RTL8BQ17RB0 113 aa15.97■□□□□ 0.15
VTI1B-205ENST00000555543 ZNF562Q6V9R5 426 aa15.97■□□□□ 0.15
VTI1B-205ENST00000555543 CASTOR1Q8WTX7 329 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms