RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 MANBALQ9NQG1 85 aa11.7□□□□□ -0.54
SCNN1A-215ENST00000540037 NAGKQ9UJ70 344 aa11.7□□□□□ -0.54
SCNN1A-215ENST00000540037 AHCTF1Q8WYP5 2266 aa11.7□□□□□ -0.54
SCNN1A-215ENST00000540037 TRBV20OR9-2A0A075B6H5 130 aa11.7□□□□□ -0.54
SCNN1A-215ENST00000540037 GFRA1P56159 465 aa11.7□□□□□ -0.54
SCNN1A-215ENST00000540037 IFI44Q8TCB0 444 aa11.7□□□□□ -0.54
SCNN1A-215ENST00000540037 MS4A10Q96PG2 267 aa11.7□□□□□ -0.54
SCNN1A-215ENST00000540037 HES7Q9BYE0 225 aa11.7□□□□□ -0.54
SCNN1A-215ENST00000540037 PARD6GQ9BYG4 376 aaPredicted RBP11.7□□□□□ -0.54
SCNN1A-215ENST00000540037 OR2D2Q9H210 308 aa11.7□□□□□ -0.54
SCNN1A-215ENST00000540037 HSPB7Q9UBY9 170 aa11.7□□□□□ -0.54
SCNN1A-215ENST00000540037 LOC400499M0QZD8 3231 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 ANKRD30BLA7E2S9 258 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 C17orf98A8MV24 154 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 M0R143 59 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 RBMXL2O75526 392 aaKnown RBP11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 FRMD6-AS1P0C7T7 363 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 ADMP35318 185 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 SRP14P37108 136 aaKnown RBP11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 THBS3P49746 956 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 GNG3P63215 75 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 C1orf194Q5T5A4 169 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 ZNF497Q6ZNH5 498 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 ZNF573Q86YE8 665 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 TMEM147Q9BVK8 224 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 TIMM9Q9Y5J7 89 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 MLNRO43193 412 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 SS18L1O75177 396 aaPredicted RBP11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 COX5AP20674 150 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 CCKARP32238 428 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 OR10P1Q8NGE3 313 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 OR52L2PQ8NGH6 319 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 SGMS2Q8NHU3 365 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 WDYHV1Q96HA8 205 aa11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 PATZ1Q9HBE1 687 aaKnown RBP11.69□□□□□ -0.54
SCNN1A-215ENST00000540037 LRRC30A6NM36 301 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 EDDM3BP56851 147 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 KCNIP4Q6PIL6 250 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 MCEMP1Q8IX19 187 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 DTD1Q8TEA8 209 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 DUSP23Q9BVJ7 150 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 PXMP4Q9Y6I8 212 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 MT-CO3P00414 261 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 WNT2P09544 360 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 RAB4AP20338 218 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 PPP1CBP62140 327 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 TMEM144Q7Z5S9 345 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 TP53TG3Q9ULZ0 132 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 PRR14LQ5THK1 2151 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 KIR2DL5BA0A0G2JN68 375 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 KIR2DL5BA0A0G2JPC4 375 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 F2Z2F3 143 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 CDIPTO14735 213 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 FOLR3P41439 243 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 CDC34P49427 236 aaPredicted RBP11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 ALKBH6Q3KRA9 238 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 KIR2DL5AQ8N109 375 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 Q8N7P7 452 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 ZNF576Q9H609 170 aa11.68□□□□□ -0.54
SCNN1A-215ENST00000540037 TMEM210A6NLX4 147 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 NPIPB11E5RHQ5 1161 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 HPRT1P00492 218 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 NPSP0C0P6 89 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 CD82P27701 267 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 CDKN1AP38936 164 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 OR3A1P47881 315 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 LINC00310P59036 64 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 IL11RAQ14626 422 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 TOMM20LQ6UXN7 152 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 Q6ZWC4 215 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 NUFIP2Q7Z417 695 aaKnown RBP11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 ZNF709Q8N972 641 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 PSPNO60542 156 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 CBLN1P23435 193 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 CXorf67Q86X51 503 aaPredicted RBP11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 TPRX1Q8N7U7 411 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 SCCPDHQ8NBX0 429 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 PLPPR2Q96GM1 343 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 C12orf49Q9H741 205 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 ELOVL5Q9NYP7 299 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 PCSK5Q92824 1860 aa11.67□□□□□ -0.54
SCNN1A-215ENST00000540037 SPENQ96T58 3664 aaKnown RBP11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 A0A1B0GWJ7 208 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 FAM166BA8MTA8 275 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 VENTXO95231 258 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 IRF2P14316 349 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 LINC00596Q86U02 117 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 MSL2Q9HCI7 577 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 IGHV3-43A0A0B4J1X8 118 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 LRP5LA4QPB2 252 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 DEFB108AA8MXU0 73 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 SYNGR4O95473 234 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 P0C879 139 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 IGHV3-43DP0DP04 118 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 LHX2P50458 406 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 BATFQ16520 125 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 PPP1R32Q7Z5V6 425 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 TMEM45BQ96B21 275 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 TMEM208Q9BTX3 173 aa11.66□□□□□ -0.54
SCNN1A-215ENST00000540037 PAM16Q9Y3D7 125 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms