RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 PTX4Q96A99 478 aa11.1□□□□□ -0.63
CSTF3-204ENST00000524556 SRD5A3Q9H8P0 318 aa11.1□□□□□ -0.63
CSTF3-204ENST00000524556 FAM53CQ9NYF3 392 aa11.1□□□□□ -0.63
CSTF3-204ENST00000524556 COA4Q9NYJ1 87 aa11.1□□□□□ -0.63
CSTF3-204ENST00000524556 OR1A1Q9P1Q5 309 aa11.1□□□□□ -0.63
CSTF3-204ENST00000524556 TRBV6-6A0A0A6YYG2 114 aa11.09□□□□□ -0.63
CSTF3-204ENST00000524556 OR11H12B2RN74 326 aa11.09□□□□□ -0.63
CSTF3-204ENST00000524556 DYNC1I1O14576 645 aa11.09□□□□□ -0.63
CSTF3-204ENST00000524556 APOA2P02652 100 aa11.09□□□□□ -0.63
CSTF3-204ENST00000524556 ZBTB25P24278 435 aa11.09□□□□□ -0.63
CSTF3-204ENST00000524556 HTR2CP28335 458 aa11.09□□□□□ -0.63
CSTF3-204ENST00000524556 C9orf16Q9BUW7 83 aa11.09□□□□□ -0.63
CSTF3-204ENST00000524556 WFDC10AQ9H1F0 79 aa11.09□□□□□ -0.63
CSTF3-204ENST00000524556 RIMS4Q9H426 269 aaPredicted RBP11.09□□□□□ -0.63
CSTF3-204ENST00000524556 ZNF221Q9UK13 617 aa11.09□□□□□ -0.63
CSTF3-204ENST00000524556 A0A0B4J203 849 aa11.08□□□□□ -0.64
CSTF3-204ENST00000524556 PNMA8CA0A1B0GUJ8 204 aa11.08□□□□□ -0.64
CSTF3-204ENST00000524556 DEFB114Q30KQ6 69 aa11.08□□□□□ -0.64
CSTF3-204ENST00000524556 ZFP1Q6P2D0 407 aa11.08□□□□□ -0.64
CSTF3-204ENST00000524556 TMEM80Q96HE8 168 aa11.08□□□□□ -0.64
CSTF3-204ENST00000524556 NICN1Q9BSH3 213 aa11.08□□□□□ -0.64
CSTF3-204ENST00000524556 ST6GALNAC5Q9BVH7 336 aa11.08□□□□□ -0.64
CSTF3-204ENST00000524556 TM2D1Q9BX74 207 aa11.08□□□□□ -0.64
CSTF3-204ENST00000524556 TMEM59Q9BXS4 323 aa11.08□□□□□ -0.64
CSTF3-204ENST00000524556 SLC35D1Q9NTN3 355 aa11.08□□□□□ -0.64
CSTF3-204ENST00000524556 M0R1X1 148 aa11.07□□□□□ -0.64
CSTF3-204ENST00000524556 BMPR1BO00238 502 aa11.07□□□□□ -0.64
CSTF3-204ENST00000524556 CD1AP06126 327 aa11.07□□□□□ -0.64
CSTF3-204ENST00000524556 HLA-DRB3P79483 266 aa11.07□□□□□ -0.64
CSTF3-204ENST00000524556 MED21Q13503 144 aa11.07□□□□□ -0.64
CSTF3-204ENST00000524556 MRGPRG-AS1Q2M3A8 158 aa11.07□□□□□ -0.64
CSTF3-204ENST00000524556 ADAD2Q8NCV1 583 aaKnown RBP11.07□□□□□ -0.64
CSTF3-204ENST00000524556 DYNLRB2Q8TF09 96 aa11.07□□□□□ -0.64
CSTF3-204ENST00000524556 ZC4H2Q9NQZ6 224 aa11.07□□□□□ -0.64
CSTF3-204ENST00000524556 PLEKHJ1Q9NW61 149 aa11.07□□□□□ -0.64
CSTF3-204ENST00000524556 MSGN1A6NI15 193 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 SCTP09683 121 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 OR9G9P0C7N8 305 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 APELAP0DMC3 54 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 KIR2DS2P43631 304 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 TAS2R43P59537 309 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 UNC119Q13432 240 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 GUCA2BQ16661 112 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 C1orf100Q5SVJ3 147 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.06□□□□□ -0.64
CSTF3-204ENST00000524556 KCNG3Q8TAE7 436 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 PHB2Q99623 299 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 OVOL2Q9BRP0 275 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 HDHD3Q9BSH5 251 aaPredicted RBP11.06□□□□□ -0.64
CSTF3-204ENST00000524556 AKIP1Q9NQ31 210 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 AK3Q9UIJ7 227 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 MGAT4AQ9UM21 535 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 RYR1P21817 5038 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 HECTD4Q9Y4D8 3996 aa11.06□□□□□ -0.64
CSTF3-204ENST00000524556 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.05□□□□□ -0.64
CSTF3-204ENST00000524556 A0A0A6YYD4 124 aa11.05□□□□□ -0.64
CSTF3-204ENST00000524556 FAM223BA6NKX1 122 aa11.05□□□□□ -0.64
CSTF3-204ENST00000524556 SRRM4A7MD48 611 aaKnown RBP11.05□□□□□ -0.64
CSTF3-204ENST00000524556 FOLR2P14207 255 aa11.05□□□□□ -0.64
CSTF3-204ENST00000524556 CELP19835 753 aa11.05□□□□□ -0.64
CSTF3-204ENST00000524556 MAPK3P27361 379 aaPredicted RBP11.05□□□□□ -0.64
CSTF3-204ENST00000524556 QRFPP83859 136 aa11.05□□□□□ -0.64
CSTF3-204ENST00000524556 RHOGP84095 191 aa11.05□□□□□ -0.64
CSTF3-204ENST00000524556 ATP5G2Q06055 141 aa11.05□□□□□ -0.64
CSTF3-204ENST00000524556 EXOSC2Q13868 293 aaKnown RBP11.05□□□□□ -0.64
CSTF3-204ENST00000524556 FAM223AQ8IWN6 122 aa11.05□□□□□ -0.64
CSTF3-204ENST00000524556 ZNF555Q8NEP9 628 aa11.05□□□□□ -0.64
CSTF3-204ENST00000524556 DDB2Q92466 427 aa11.05□□□□□ -0.64
CSTF3-204ENST00000524556 THRSPQ92748 146 aa11.05□□□□□ -0.64
CSTF3-204ENST00000524556 HARBI1Q96MB7 349 aa11.05□□□□□ -0.64
CSTF3-204ENST00000524556 KCNK15Q9H427 330 aa11.05□□□□□ -0.64
CSTF3-204ENST00000524556 Q9N2K0 584 aa11.05□□□□□ -0.64
CSTF3-204ENST00000524556 TECRQ9NZ01 308 aaKnown RBP11.05□□□□□ -0.64
CSTF3-204ENST00000524556 ZNF230Q9UIE0 474 aaPredicted RBP11.05□□□□□ -0.64
CSTF3-204ENST00000524556 VPS13DQ5THJ4 4388 aa11.04□□□□□ -0.64
CSTF3-204ENST00000524556 TRBV9A0A0B4J1U6 114 aa11.04□□□□□ -0.64
CSTF3-204ENST00000524556 IGKV1-6A0A0C4DH72 117 aa11.04□□□□□ -0.64
CSTF3-204ENST00000524556 CXorf65A6NEN9 183 aa11.04□□□□□ -0.64
CSTF3-204ENST00000524556 NUPR2A6NF83 97 aa11.04□□□□□ -0.64
CSTF3-204ENST00000524556 C2orf70A6NJV1 201 aa11.04□□□□□ -0.64
CSTF3-204ENST00000524556 TMEM14DPA8MWL7 114 aa11.04□□□□□ -0.64
CSTF3-204ENST00000524556 EDN2P20800 178 aa11.04□□□□□ -0.64
CSTF3-204ENST00000524556 PMS2P11Q13670 270 aa11.04□□□□□ -0.64
CSTF3-204ENST00000524556 TMEM177Q53S58 311 aa11.04□□□□□ -0.64
CSTF3-204ENST00000524556 GLT8D1Q68CQ7 371 aa11.04□□□□□ -0.64
CSTF3-204ENST00000524556 LRRTM1Q86UE6 522 aa11.04□□□□□ -0.64
CSTF3-204ENST00000524556 GGHQ92820 318 aa11.04□□□□□ -0.64
CSTF3-204ENST00000524556 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
CSTF3-204ENST00000524556 WDR89Q96FK6 387 aaPredicted RBP11.04□□□□□ -0.64
CSTF3-204ENST00000524556 RDH8Q9NYR8 311 aa11.04□□□□□ -0.64
CSTF3-204ENST00000524556 KIAA1109Q2LD37 5005 aa11.03□□□□□ -0.64
CSTF3-204ENST00000524556 EFCAB10A6NFE3 127 aa11.03□□□□□ -0.64
CSTF3-204ENST00000524556 SHOXO15266 292 aa11.03□□□□□ -0.64
CSTF3-204ENST00000524556 SOCS1O15524 211 aa11.03□□□□□ -0.64
CSTF3-204ENST00000524556 TUSC2O75896 110 aa11.03□□□□□ -0.64
CSTF3-204ENST00000524556 PRH1P02810 166 aa11.03□□□□□ -0.64
CSTF3-204ENST00000524556 TAGLNQ01995 201 aaKnown RBP11.03□□□□□ -0.64
CSTF3-204ENST00000524556 ZNF45Q02386 682 aa11.03□□□□□ -0.64
CSTF3-204ENST00000524556 ST3GAL4Q11206 333 aa11.03□□□□□ -0.64
CSTF3-204ENST00000524556 SLC16A13Q7RTY0 426 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms