RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 CELA2AP08217 269 aa2.56□□□□□ -2
PVT1-202ENST00000512617 TSPAN19P0C672 248 aa2.56□□□□□ -2
PVT1-202ENST00000512617 UBBP0CG47 229 aa2.56□□□□□ -2
PVT1-202ENST00000512617 CPMP14384 443 aa2.56□□□□□ -2
PVT1-202ENST00000512617 LMO2P25791 158 aa2.56□□□□□ -2
PVT1-202ENST00000512617 HSPA9P38646 679 aaKnown RBP2.56□□□□□ -2
PVT1-202ENST00000512617 ZNF138P52744 262 aa2.56□□□□□ -2
PVT1-202ENST00000512617 KLF3P57682 345 aaPredicted RBP2.56□□□□□ -2
PVT1-202ENST00000512617 DEFA1P59665 94 aa2.56□□□□□ -2
PVT1-202ENST00000512617 GNG2P59768 71 aa2.56□□□□□ -2
PVT1-202ENST00000512617 UBE2NP61088 152 aaKnown RBP2.56□□□□□ -2
PVT1-202ENST00000512617 RRAS2P62070 204 aaPredicted RBP2.56□□□□□ -2
PVT1-202ENST00000512617 RPS28P62857 69 aaKnown RBP2.56□□□□□ -2
PVT1-202ENST00000512617 EMX2Q04743 252 aa2.56□□□□□ -2
PVT1-202ENST00000512617 TMEM267Q0VDI3 215 aaPredicted RBP2.56□□□□□ -2
PVT1-202ENST00000512617 ARFRP1Q13795 201 aa2.56□□□□□ -2
PVT1-202ENST00000512617 RBMY1FQ15415 496 aaKnown RBP2.56□□□□□ -2
PVT1-202ENST00000512617 FCN2Q15485 313 aa2.56□□□□□ -2
PVT1-202ENST00000512617 OR8B8Q15620 311 aa2.56□□□□□ -2
PVT1-202ENST00000512617 ZNF404Q494X3 552 aa2.56□□□□□ -2
PVT1-202ENST00000512617 OR2B11Q5JQS5 317 aa2.56□□□□□ -2
PVT1-202ENST00000512617 COA6Q5JTJ3 125 aaKnown RBP2.56□□□□□ -2
PVT1-202ENST00000512617 UBE2NLQ5JXB2 153 aa2.56□□□□□ -2
PVT1-202ENST00000512617 ZNF493Q6ZR52 646 aa2.56□□□□□ -2
PVT1-202ENST00000512617 H2AFVQ71UI9 128 aa2.56□□□□□ -2
PVT1-202ENST00000512617 STRADAQ7RTN6 431 aa2.56□□□□□ -2
PVT1-202ENST00000512617 ATP5L2Q7Z4Y8 100 aa2.56□□□□□ -2
PVT1-202ENST00000512617 CIARTQ8N365 385 aaPredicted RBP2.56□□□□□ -2
PVT1-202ENST00000512617 SLC25A45Q8N413 288 aa2.56□□□□□ -2
PVT1-202ENST00000512617 ZNF283Q8N7M2 679 aa2.56□□□□□ -2
PVT1-202ENST00000512617 NKAPP1Q8N9T2 125 aa2.56□□□□□ -2
PVT1-202ENST00000512617 AQP11Q8NBQ7 271 aa2.56□□□□□ -2
PVT1-202ENST00000512617 OR13C4Q8NGS5 318 aa2.56□□□□□ -2
PVT1-202ENST00000512617 DCAKDQ8WVC6 231 aa2.56□□□□□ -2
PVT1-202ENST00000512617 OR5P3Q8WZ94 311 aa2.56□□□□□ -2
PVT1-202ENST00000512617 APOBEC3DQ96AK3 386 aaPredicted RBP2.56□□□□□ -2
PVT1-202ENST00000512617 ZNF689Q96CS4 500 aaPredicted RBP2.56□□□□□ -2
PVT1-202ENST00000512617 MALSU1Q96EH3 234 aa2.56□□□□□ -2
PVT1-202ENST00000512617 NEURL3Q96EH8 262 aa2.56□□□□□ -2
PVT1-202ENST00000512617 SLC45A3Q96JT2 553 aa2.56□□□□□ -2
PVT1-202ENST00000512617 C8orf49Q96NF6 230 aa2.56□□□□□ -2
PVT1-202ENST00000512617 SIGLEC12Q96PQ1 595 aa2.56□□□□□ -2
PVT1-202ENST00000512617 SERPINI1Q99574 410 aa2.56□□□□□ -2
PVT1-202ENST00000512617 ANAPC13Q9BS18 74 aa2.56□□□□□ -2
PVT1-202ENST00000512617 TMEM147Q9BVK8 224 aa2.56□□□□□ -2
PVT1-202ENST00000512617 KRTAP17-1Q9BYP8 105 aa2.56□□□□□ -2
PVT1-202ENST00000512617 TBL1XR1Q9BZK7 514 aa2.56□□□□□ -2
PVT1-202ENST00000512617 ZBP1Q9H171 429 aa2.56□□□□□ -2
PVT1-202ENST00000512617 VCXQ9H320 206 aa2.56□□□□□ -2
PVT1-202ENST00000512617 ZNF331Q9NQX6 463 aaPredicted RBP2.56□□□□□ -2
PVT1-202ENST00000512617 RBM12B-AS1Q9P1G2 102 aa2.56□□□□□ -2
PVT1-202ENST00000512617 GNG8Q9UK08 70 aa2.56□□□□□ -2
PVT1-202ENST00000512617 POMPQ9Y244 141 aa2.56□□□□□ -2
PVT1-202ENST00000512617 RFNGQ9Y644 331 aa2.56□□□□□ -2
PVT1-202ENST00000512617 COL11A1P12107 1806 aaPredicted RBP2.56□□□□□ -2
PVT1-202ENST00000512617 LCTP09848 1927 aa2.56□□□□□ -2
PVT1-202ENST00000512617 MYH8P13535 1937 aa2.56□□□□□ -2
PVT1-202ENST00000512617 EVPLQ92817 2033 aa2.56□□□□□ -2
PVT1-202ENST00000512617 IGLV4-3A0A075B6K6 122 aa2.55□□□□□ -2
PVT1-202ENST00000512617 TRAV8-1A0A0A6YYK1 113 aa2.55□□□□□ -2
PVT1-202ENST00000512617 IGHV2-26A0A0B4J1V2 119 aa2.55□□□□□ -2
PVT1-202ENST00000512617 A0A0D9SFI3 127 aa2.55□□□□□ -2
PVT1-202ENST00000512617 PVALEFA0A1B0GWK0 134 aa2.55□□□□□ -2
PVT1-202ENST00000512617 C9orf170A2RU37 121 aa2.55□□□□□ -2
PVT1-202ENST00000512617 OR5H14A6NHG9 310 aa2.55□□□□□ -2
PVT1-202ENST00000512617 RPL37AP8A6NKH3 93 aa2.55□□□□□ -2
PVT1-202ENST00000512617 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.55□□□□□ -2
PVT1-202ENST00000512617 INMT-MINDY4F8WBC2 141 aa2.55□□□□□ -2
PVT1-202ENST00000512617 J3KT08 172 aa2.55□□□□□ -2
PVT1-202ENST00000512617 K7ERU9 68 aa2.55□□□□□ -2
PVT1-202ENST00000512617 FFAR1O14842 300 aa2.55□□□□□ -2
PVT1-202ENST00000512617 SUPT7LO94864 414 aa2.55□□□□□ -2
PVT1-202ENST00000512617 TNFSF15O95150 251 aa2.55□□□□□ -2
PVT1-202ENST00000512617 CDS2O95674 445 aa2.55□□□□□ -2
PVT1-202ENST00000512617 IGHG2P01859 326 aa2.55□□□□□ -2
PVT1-202ENST00000512617 HLA-DRB1P01911 266 aa2.55□□□□□ -2
PVT1-202ENST00000512617 IFNA4P05014 189 aa2.55□□□□□ -2
PVT1-202ENST00000512617 CD48P09326 243 aa2.55□□□□□ -2
PVT1-202ENST00000512617 LGALS1P09382 135 aaKnown RBP2.55□□□□□ -2
PVT1-202ENST00000512617 MPC1LP0DKB6 136 aa2.55□□□□□ -2
PVT1-202ENST00000512617 OR12D1P0DN82 309 aa2.55□□□□□ -2
PVT1-202ENST00000512617 IGHV3-43DP0DP04 118 aa2.55□□□□□ -2
PVT1-202ENST00000512617 FOLR2P14207 255 aa2.55□□□□□ -2
PVT1-202ENST00000512617 ORM2P19652 201 aa2.55□□□□□ -2
PVT1-202ENST00000512617 COX7A1P24310 79 aa2.55□□□□□ -2
PVT1-202ENST00000512617 SYNJ2BPP57105 145 aa2.55□□□□□ -2
PVT1-202ENST00000512617 SNRPD2P62316 118 aaKnown RBP2.55□□□□□ -2
PVT1-202ENST00000512617 REG3AQ06141 175 aa2.55□□□□□ -2
PVT1-202ENST00000512617 RHEBQ15382 184 aa2.55□□□□□ -2
PVT1-202ENST00000512617 GRK1Q15835 563 aa2.55□□□□□ -2
PVT1-202ENST00000512617 LAMA4Q16363 1823 aa2.55□□□□□ -2
PVT1-202ENST00000512617 LTC4SQ16873 150 aa2.55□□□□□ -2
PVT1-202ENST00000512617 RNF212Q495C1 297 aa2.55□□□□□ -2
PVT1-202ENST00000512617 ABCA11PQ4W5N1 156 aa2.55□□□□□ -2
PVT1-202ENST00000512617 RNASE10Q5GAN6 216 aaKnown RBP2.55□□□□□ -2
PVT1-202ENST00000512617 SZT2Q5T011 3432 aa2.55□□□□□ -2
PVT1-202ENST00000512617 NXNL2Q5VZ03 156 aa2.55□□□□□ -2
PVT1-202ENST00000512617 PLET1Q6UQ28 207 aa2.55□□□□□ -2
PVT1-202ENST00000512617 Q6ZPA2 131 aa2.55□□□□□ -2
PVT1-202ENST00000512617 Q6ZRU5 148 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms