RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MRPL16Q9NX20 251 aaKnown RBP3.92□□□□□ -1.78
NIPBL-204ENST00000504430 HS3ST2Q9Y278 367 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 FLVCR1Q9Y5Y0 555 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 DOCK4Q8N1I0 1966 aa3.92□□□□□ -1.78
NIPBL-204ENST00000504430 IGKV1D-43A0A0B4J1Z2 117 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 M0R129 80 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 COPEO14579 308 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 MYL12BO14950 172 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 ZNF780AO75290 641 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-204ENST00000504430 NDUFC2O95298 119 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 APOA2P02652 100 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 DSCR9P59020 149 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 PKIAP61925 76 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 RPL23P62829 140 aaKnown RBP3.91□□□□□ -1.78
NIPBL-204ENST00000504430 PPP3R1P63098 170 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 ENDOGQ14249 297 aaKnown RBP3.91□□□□□ -1.78
NIPBL-204ENST00000504430 FCN2Q15485 313 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 MSMO1Q15800 293 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 FKBP1CQ5VVH2 108 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 OR8D2Q9GZM6 311 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 CHST6Q9GZX3 395 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 NEUROG3Q9Y4Z2 214 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 PSPHP1O15172 72 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 HCRTR1O43613 425 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 IL3RAP26951 378 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 PPP1CCP36873 323 aaKnown RBP3.91□□□□□ -1.78
NIPBL-204ENST00000504430 INSL3P51460 131 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 ADAMTSL4-AS1Q5T5F5 129 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 RUSC1-AS1Q66K80 236 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 C11orf71Q6IPW1 123 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 OR52R1Q8NGF1 315 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 OR51A4Q8NGJ6 313 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 SLC7A6Q92536 515 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 CNBD2Q96M20 576 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 PAXXQ9BUH6 204 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 MMP26Q9NRE1 261 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 SPANXA1Q9NS26 97 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 A2MP01023 1474 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 ABCC10Q5T3U5 1492 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 TONSLQ96HA7 1378 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 A8MUN3 132 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 RAB3BP20337 219 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 HOXA5P20719 270 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 RBMXP38159 391 aaKnown RBP3.91□□□□□ -1.78
NIPBL-204ENST00000504430 THBS3P49746 956 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 ZNF141Q15928 474 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 AVPI1Q5T686 147 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 TMEM244Q5VVB8 128 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 OR2M3Q8NG83 312 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 HIST1H4GQ99525 98 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 PRADC1Q9BSG0 188 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 OTORQ9NRC9 128 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 BAIAP2Q9UQB8 552 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 SMG6Q86US8 1419 aaKnown RBP3.91□□□□□ -1.78
NIPBL-204ENST00000504430 KIAA1671Q9BY89 1806 aa3.91□□□□□ -1.78
NIPBL-204ENST00000504430 CDK5RAP2Q96SN8 1893 aa3.9□□□□□ -1.78
NIPBL-204ENST00000504430 WNK3Q9BYP7 1800 aa3.9□□□□□ -1.78
NIPBL-204ENST00000504430 TRAV39A0A0B4J263 110 aa3.9□□□□□ -1.78
NIPBL-204ENST00000504430 GABARAPH6UMI1 98 aa3.9□□□□□ -1.78
NIPBL-204ENST00000504430 NRASP01111 189 aa3.9□□□□□ -1.78
NIPBL-204ENST00000504430 CXCL12P48061 93 aa3.9□□□□□ -1.78
NIPBL-204ENST00000504430 ADIGQ0VDE8 80 aa3.9□□□□□ -1.78
NIPBL-204ENST00000504430 SCGB2B2Q4G0G5 96 aa3.9□□□□□ -1.78
NIPBL-204ENST00000504430 SFXN3Q9BWM7 321 aa3.9□□□□□ -1.78
NIPBL-204ENST00000504430 AIG1Q9NVV5 245 aa3.9□□□□□ -1.78
NIPBL-204ENST00000504430 ATG2AQ2TAZ0 1938 aa3.9□□□□□ -1.78
NIPBL-204ENST00000504430 FAM220BPB1ANY3 271 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 J3QQQ9 107 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 OR2H2O95918 312 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 CRYBA1P05813 215 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 IGLC6P0CF74 106 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 CHTF8P0CG12 524 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 OR12D1P0DN82 309 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 NCS1P62166 190 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 AWAT2Q6E213 333 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 WDR86Q86TI4 376 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 C11orf42Q8N5U0 333 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 ZNF615Q8N8J6 731 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 ZNF420Q8TAQ5 688 aaPredicted RBP3.9□□□□□ -1.79
NIPBL-204ENST00000504430 ISOC1Q96CN7 298 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 PHYHIPLQ96FC7 376 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 SND1-IT1Q9HBX3 110 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 OR5AC2Q9NZP5 309 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 LINC00527Q9UJ94 153 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 SCN2AQ99250 2005 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 ANKRD12Q6UB98 2062 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 NFASCO94856 1347 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 IGHV2-26A0A0B4J1V2 119 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 M0R143 59 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 CD5LO43866 347 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 FAM107AO95990 144 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 IGHV3-43DP0DP04 118 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 LPAR6P43657 344 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 FKBP1AP62942 108 aaKnown RBP3.9□□□□□ -1.79
NIPBL-204ENST00000504430 METTL27Q8N6F8 245 aaPredicted RBP3.9□□□□□ -1.79
NIPBL-204ENST00000504430 TMEM252Q8N6L7 170 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 OR5K1Q8NHB7 308 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 OR2M2Q96R28 347 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 OCR1Q9BZK8 76 aa3.9□□□□□ -1.79
NIPBL-204ENST00000504430 ZNF702PQ9H963 129 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms