RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	IRGM	A1A4Y4	181 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	SOCS1	O15524	211 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	ZBTB25	P24278	435 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	HLA-DRB3	P79483	266 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	QRFP	P83859	136 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	ST3GAL4	Q11206	333 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	RPEL1	Q2QD12	228 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	C1orf100	Q5SVJ3	147 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	RNLS	Q5VYX0	342 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	ZNF555	Q8NEP9	628 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	PTX4	Q96A99	478 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	TM2D1	Q9BX74	207 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	PLEKHJ1	Q9NW61	149 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	SMPD3	Q9NY59	655 aa	Predicted RBP	10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	COA4	Q9NYJ1	87 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	SELENOK	Q9Y6D0	94 aa		10.34	□□□□□ -0.75
SAMM50-204	ENST00000493161	TRBV6-6	A0A0A6YYG2	114 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	SRRM4	A7MD48	611 aa	Known RBP	10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161		M0R1X1	148 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	BMPR1B	O00238	502 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	OR2A4	O95047	310 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	PRH1	P02810	166 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	UBB	P0CG47	229 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	AADAC	P22760	399 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	MOB1B	Q7L9L4	216 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	EDARADD	Q8WWZ3	215 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	LINC00476	Q8WZB0	136 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	C5orf30	Q96GV9	206 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	S100A14	Q9HCY8	104 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	SLC35D1	Q9NTN3	355 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	ZNF221	Q9UK13	617 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	HERC2	O95714	4834 aa		10.33	□□□□□ -0.76
SAMM50-204	ENST00000493161	MSGN1	A6NI15	193 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	TMEM14DP	A8MWL7	114 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	TPPP	O94811	219 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	APOA2	P02652	100 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	CD1A	P06126	327 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	CD3G	P09693	182 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	TAS2R43	P59537	309 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	TATDN3	Q17R31	274 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	LAIR2	Q6ISS4	152 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	PQLC1	Q8N2U9	271 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	ADAD2	Q8NCV1	583 aa	Known RBP	10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	KCNG3	Q8TAE7	436 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	USMG5	Q96IX5	58 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	LPAR5	Q9H1C0	372 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	SRD5A3	Q9H8P0	318 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161		Q9N2K0	584 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	FRAS1	Q86XX4	4008 aa		10.32	□□□□□ -0.76
SAMM50-204	ENST00000493161	EFCAB10	A6NFE3	127 aa		10.31	□□□□□ -0.76
SAMM50-204	ENST00000493161	LGALS7	P47929	136 aa		10.31	□□□□□ -0.76
SAMM50-204	ENST00000493161	TMEM50B	P56557	158 aa		10.31	□□□□□ -0.76
SAMM50-204	ENST00000493161	ZNF45	Q02386	682 aa		10.31	□□□□□ -0.76
SAMM50-204	ENST00000493161	MED21	Q13503	144 aa		10.31	□□□□□ -0.76
SAMM50-204	ENST00000493161	ACSM3	Q53FZ2	586 aa		10.31	□□□□□ -0.76
SAMM50-204	ENST00000493161	GLT8D1	Q68CQ7	371 aa		10.31	□□□□□ -0.76
SAMM50-204	ENST00000493161	OR2K2	Q8NGT1	345 aa		10.31	□□□□□ -0.76
SAMM50-204	ENST00000493161	CYGB	Q8WWM9	190 aa		10.31	□□□□□ -0.76
SAMM50-204	ENST00000493161	SNAPC3	Q92966	411 aa		10.31	□□□□□ -0.76
SAMM50-204	ENST00000493161	HARBI1	Q96MB7	349 aa		10.31	□□□□□ -0.76
SAMM50-204	ENST00000493161	TMEM68	Q96MH6	324 aa		10.31	□□□□□ -0.76
SAMM50-204	ENST00000493161	AKIP1	Q9NQ31	210 aa		10.31	□□□□□ -0.76
SAMM50-204	ENST00000493161	RDH8	Q9NYR8	311 aa		10.31	□□□□□ -0.76
SAMM50-204	ENST00000493161	FOXI3	A8MTJ6	420 aa	Predicted RBP	10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	OR11H12	B2RN74	326 aa		10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	LY6G6C	O95867	125 aa		10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	CD37	P11049	281 aa		10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	MAPK3	P27361	379 aa	Predicted RBP	10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	WNT4	P56705	351 aa		10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	RHOG	P84095	191 aa		10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	P2RY14	Q15391	338 aa		10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	GUCA2B	Q16661	112 aa		10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	DEFB114	Q30KQ6	69 aa		10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	RBM48	Q5RL73	367 aa	Known RBP	10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	WDR89	Q96FK6	387 aa	Predicted RBP	10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	PHB2	Q99623	299 aa		10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	GFI1	Q99684	422 aa		10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	RIMS4	Q9H426	269 aa	Predicted RBP	10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	SDHAF2	Q9NX18	166 aa		10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	SLC2A8	Q9NY64	477 aa		10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	PEMT	Q9UBM1	199 aa		10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	ZNF230	Q9UIE0	474 aa	Predicted RBP	10.3	□□□□□ -0.76
SAMM50-204	ENST00000493161	PPP5D1	E7EU14	171 aa		10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161	HLA-A	P01891	365 aa	Known RBP	10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161	OR9G9	P0C7N8	305 aa		10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161	EXOSC2	Q13868	293 aa	Known RBP	10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161	TMEM177	Q53S58	311 aa		10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161	IDO2	Q6ZQW0	420 aa		10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161	LAX1	Q8IWV1	398 aa		10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161	FAM89B	Q8N5H3	189 aa		10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161	NANOGP1	Q8N7R0	232 aa		10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161	ARHGAP5-AS1	Q96IT6	56 aa		10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161	PECR	Q9BY49	303 aa		10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161	OR2D2	Q9H210	308 aa		10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161	C12orf4	Q9NQ89	552 aa		10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161	PSORS1C1	Q9UIG5	152 aa		10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161	DMRT1	Q9Y5R6	373 aa		10.29	□□□□□ -0.76
SAMM50-204	ENST00000493161		A0A0B4J203	849 aa		10.28	□□□□□ -0.76
SAMM50-204	ENST00000493161	TRDC	B7Z8K6	153 aa		10.28	□□□□□ -0.76
SAMM50-204	ENST00000493161	MYL12B	O14950	172 aa		10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms