RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	VSIG4	Q9Y279	399 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	NUBP2	Q9Y5Y2	271 aa		11.67	□□□□□ -0.54
CCNL1-222	ENST00000479596	METTL21EP	A6NDL7	271 aa		11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	SPDEF	O95238	335 aa		11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	CA2	P00918	260 aa		11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	IGLV2-23	P01705	113 aa		11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	OR8U9	P0C7N5	309 aa		11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	PLGLA	Q15195	96 aa		11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.66	□□□□□ -0.54	1e-6	■□□□□ 10.2
CCNL1-222	ENST00000479596	TMEM65	Q6PI78	240 aa		11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	OR10J5	Q8NHC4	309 aa		11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	OR5B12	Q96R08	314 aa		11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	CLCC1	Q96S66	551 aa		11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	FAM103A1	Q9BTL3	118 aa	Known RBP	11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	ATG5	Q9H1Y0	275 aa		11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	OR51E2	Q9H255	320 aa		11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	METTL1	Q9UBP6	276 aa	Known RBP	11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	SCOC	Q9UIL1	159 aa		11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	FOXA2	Q9Y261	457 aa	Predicted RBP	11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596	A3GALT2	U3KPV4	340 aa		11.66	□□□□□ -0.54
CCNL1-222	ENST00000479596		A0A1W2PN81	502 aa		11.65	□□□□□ -0.54
CCNL1-222	ENST00000479596	ARPC1B	O15143	372 aa	Known RBP	11.65	□□□□□ -0.54
CCNL1-222	ENST00000479596	CHRNA7	P36544	502 aa		11.65	□□□□□ -0.54
CCNL1-222	ENST00000479596	ZNF562	Q6V9R5	426 aa		11.65	□□□□□ -0.54
CCNL1-222	ENST00000479596	TPRA1	Q86W33	373 aa		11.65	□□□□□ -0.54
CCNL1-222	ENST00000479596	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.65	□□□□□ -0.54
CCNL1-222	ENST00000479596	TSNAX	Q99598	290 aa	Known RBP	11.65	□□□□□ -0.54
CCNL1-222	ENST00000479596	ALX4	Q9H161	411 aa	Predicted RBP	11.65	□□□□□ -0.54
CCNL1-222	ENST00000479596	RNF167	Q9H6Y7	350 aa		11.65	□□□□□ -0.54
CCNL1-222	ENST00000479596	SLC25A17	O43808	307 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	APOA2	P02652	100 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	CRYGB	P07316	175 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	CLEC2L	P0C7M8	214 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	DTYMK	P23919	212 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	RPS16	P62249	146 aa	Known RBP	11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	DGCR2	P98153	550 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	ZNF616	Q08AN1	781 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	ARFRP1	Q13795	201 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	CDNF	Q49AH0	187 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	SFXN4	Q6P4A7	337 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	PPP1R27	Q86WC6	154 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	TCTEX1D1	Q8N7M0	179 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	OR1N2	Q8NGR9	330 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	LGALS14	Q8TCE9	139 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	FLYWCH2	Q96CP2	140 aa	Known RBP	11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	SLC35D1	Q9NTN3	355 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	DAPK2	Q9UIK4	370 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	SSR3	Q9UNL2	185 aa		11.64	□□□□□ -0.55
CCNL1-222	ENST00000479596	SEC14L6	B5MCN3	397 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	OR8U8	P0C7N1	319 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	SDC2	P34741	201 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	PJVK	Q0ZLH3	352 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	MRGPRG-AS1	Q2M3A8	158 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	AKIRIN2	Q53H80	203 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	DEFB121	Q5J5C9	76 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	C9orf66	Q5T8R8	295 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	HACD4	Q5VWC8	232 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	UNQ5815/PRO19632	Q6UWF5	114 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	LFNG	Q8NES3	379 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	ABHD5	Q8WTS1	349 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	NUDCD2	Q8WVJ2	157 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	DDB2	Q92466	427 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	ARPC1A	Q92747	370 aa		11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	RRP15	Q9Y3B9	282 aa	Known RBP	11.63	□□□□□ -0.55
CCNL1-222	ENST00000479596	TMEM235	A6NFC5	223 aa		11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	SRRM4	A7MD48	611 aa	Known RBP	11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	LINC00473	A8K010	186 aa		11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	SSX5	O60225	188 aa		11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	LGALS1	P09382	135 aa	Known RBP	11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	TALDO1	P37837	337 aa		11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	ARL6IP1	Q15041	203 aa		11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	ZNF260	Q3ZCT1	412 aa		11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	KCTD21	Q4G0X4	260 aa		11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	TMEM177	Q53S58	311 aa		11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	ACTBL2	Q562R1	376 aa		11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	BVES	Q8NE79	360 aa		11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	SLC25A38	Q96DW6	304 aa		11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	GINS4	Q9BRT9	223 aa		11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	KMT2C	Q8NEZ4	4911 aa	Known RBP	11.62	□□□□□ -0.55
CCNL1-222	ENST00000479596	IGHV4OR15-8	A0A075B7B6	117 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596		A0A087WW49	117 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	RAMP3	O60896	148 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	DUT	P33316	252 aa	Known RBP	11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	MXD1	Q05195	221 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	FXYD3	Q14802	87 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	NEDD8	Q15843	81 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	PYHIN1	Q6K0P9	492 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	C11orf87	Q6NUJ2	197 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	OR5H6	Q8NGV6	325 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	GRPEL2	Q8TAA5	225 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	DCUN1D4	Q92564	292 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	HARBI1	Q96MB7	349 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	MS4A10	Q96PG2	267 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	PRR25	Q96S07	402 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	CENPO	Q9BU64	300 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	ST6GALNAC5	Q9BVH7	336 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	RHBDL2	Q9NX52	303 aa		11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	LSM4	Q9Y4Z0	139 aa	Known RBP	11.61	□□□□□ -0.55
CCNL1-222	ENST00000479596	LOC100506127	A0A0U1RQW1	187 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms