RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 TAGLN3Q9UI15 199 aa11.19□□□□□ -0.62
SMG5-204ENST00000476954 TRAV25A0A0B4J276 109 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 FAM90A7PA6NKC0 464 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 A8MWP6 167 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 C11orf94C9JXX5 98 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 J3QRE1 110 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 T-ENOLP0DO92 83 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 HMGN3Q15651 99 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 SLC25A30Q5SVS4 291 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 UNQ9165/PRO28630Q6UXU0 137 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 Q6ZR54 194 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 ZNF554Q86TJ5 538 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 SLC38A6Q8IZM9 456 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 DNAJC9Q8WXX5 260 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 GALNT14Q96FL9 552 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 JAM3Q9BX67 310 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 BANF2Q9H503 90 aa11.18□□□□□ -0.62
SMG5-204ENST00000476954 SRRM2Q9UQ35 2752 aaKnown RBP11.17□□□□□ -0.62
SMG5-204ENST00000476954 MPPED1O15442 326 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 CA11O75493 328 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 GPX5O75715 221 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 HLA-DMBP28068 263 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 ARL3P36405 182 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 ZNF585BQ52M93 769 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 CLEC19AQ6UXS0 136 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 Q6ZTC4 211 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 PDPNQ86YL7 162 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 APRG1Q8IVJ8 170 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 OR5AK2Q8NH90 309 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 CCDC140Q96MF4 163 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 SULT4A1Q9BR01 284 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 SCRT1Q9BWW7 348 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 C11orf54Q9H0W9 315 aaPredicted RBP11.17□□□□□ -0.62
SMG5-204ENST00000476954 RIBC2Q9H4K1 309 aa11.17□□□□□ -0.62
SMG5-204ENST00000476954 PAK1IP1Q9NWT1 392 aaPredicted RBP11.17□□□□□ -0.62
SMG5-204ENST00000476954 EXOSC1Q9Y3B2 195 aaKnown RBP11.17□□□□□ -0.62
SMG5-204ENST00000476954 SRRM4A7MD48 611 aaKnown RBP11.16□□□□□ -0.62
SMG5-204ENST00000476954 MPTX1A8MV57 137 aa11.16□□□□□ -0.62
SMG5-204ENST00000476954 ZNF780AO75290 641 aaPredicted RBP11.16□□□□□ -0.62
SMG5-204ENST00000476954 RPSAP08865 295 aaKnown RBP11.16□□□□□ -0.62
SMG5-204ENST00000476954 POLR2IP36954 125 aaKnown RBP11.16□□□□□ -0.62
SMG5-204ENST00000476954 TNXAQ16473 311 aa11.16□□□□□ -0.62
SMG5-204ENST00000476954 PVRIGQ6DKI7 326 aa11.16□□□□□ -0.62
SMG5-204ENST00000476954 NECAP1Q8NC96 275 aa11.16□□□□□ -0.62
SMG5-204ENST00000476954 OR4A5Q8NH83 315 aa11.16□□□□□ -0.62
SMG5-204ENST00000476954 CD300LFQ8TDQ1 290 aa11.16□□□□□ -0.62
SMG5-204ENST00000476954 SRSF12Q8WXF0 261 aaKnown RBP11.16□□□□□ -0.62
SMG5-204ENST00000476954 CCDC124Q96CT7 223 aaKnown RBP11.16□□□□□ -0.62
SMG5-204ENST00000476954 OR14A2Q96R54 314 aa11.16□□□□□ -0.62
SMG5-204ENST00000476954 CSTL1Q9H114 145 aa11.16□□□□□ -0.62
SMG5-204ENST00000476954 SLC35D1Q9NTN3 355 aa11.16□□□□□ -0.62
SMG5-204ENST00000476954 OR1A1Q9P1Q5 309 aa11.16□□□□□ -0.62
SMG5-204ENST00000476954 GMPPBQ9Y5P6 360 aa11.16□□□□□ -0.62
SMG5-204ENST00000476954 APOA2P02652 100 aa11.15□□□□□ -0.62
SMG5-204ENST00000476954 C8orf88P0DMB2 117 aa11.15□□□□□ -0.62
SMG5-204ENST00000476954 FUT3P21217 361 aa11.15□□□□□ -0.62
SMG5-204ENST00000476954 MED22Q15528 200 aa11.15□□□□□ -0.62
SMG5-204ENST00000476954 SPAG8Q99932 426 aaPredicted RBP11.15□□□□□ -0.62
SMG5-204ENST00000476954 SELENOIQ9C0D9 397 aa11.15□□□□□ -0.62
SMG5-204ENST00000476954 TMEM138Q9NPI0 162 aa11.15□□□□□ -0.62
SMG5-204ENST00000476954 AGRNO00468 2067 aa11.15□□□□□ -0.63
SMG5-204ENST00000476954 TRAV10A0A0B4J240 114 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 TMEM212A6NML5 194 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 P0DMU3 169 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 FAM231AP0DMU4 169 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 FAM231CP0DMU5 169 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 BDKRB2P30411 391 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 TNP2Q05952 138 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 TMED1Q13445 227 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 MED21Q13503 144 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 FAM106AQ4KMX7 169 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 C10orf55Q5SWW7 151 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 LHFPL3Q86UP9 236 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 MUL1Q969V5 352 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 HARBI1Q96MB7 349 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 ZNF184Q99676 751 aaPredicted RBP11.14□□□□□ -0.63
SMG5-204ENST00000476954 CHRDL1Q9BU40 450 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 RNF126Q9BV68 326 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 ABRACLQ9P1F3 81 aa11.14□□□□□ -0.63
SMG5-204ENST00000476954 FLG2Q5D862 2391 aaPredicted RBP11.14□□□□□ -0.63
SMG5-204ENST00000476954 FKBP6O75344 327 aa11.13□□□□□ -0.63
SMG5-204ENST00000476954 SCTP09683 121 aa11.13□□□□□ -0.63
SMG5-204ENST00000476954 RBMY1A1P0DJD3 496 aaKnown RBP11.13□□□□□ -0.63
SMG5-204ENST00000476954 RBMY1CP0DJD4 496 aa11.13□□□□□ -0.63
SMG5-204ENST00000476954 GLIPR1L1Q6UWM5 242 aa11.13□□□□□ -0.63
SMG5-204ENST00000476954 IDO2Q6ZQW0 420 aa11.13□□□□□ -0.63
SMG5-204ENST00000476954 NR2C2APQ86WQ0 139 aa11.13□□□□□ -0.63
SMG5-204ENST00000476954 LRRC42Q9Y546 428 aa11.13□□□□□ -0.63
SMG5-204ENST00000476954 IGHV3-35A0A0C4DH35 117 aa11.12□□□□□ -0.63
SMG5-204ENST00000476954 M0R1X1 148 aa11.12□□□□□ -0.63
SMG5-204ENST00000476954 TSPAN4O14817 238 aa11.12□□□□□ -0.63
SMG5-204ENST00000476954 MGMTP16455 207 aa11.12□□□□□ -0.63
SMG5-204ENST00000476954 GTF2A1P52655 376 aaPredicted RBP11.12□□□□□ -0.63
SMG5-204ENST00000476954 PRSS8Q16651 343 aa11.12□□□□□ -0.63
SMG5-204ENST00000476954 FAM209BQ5JX69 171 aa11.12□□□□□ -0.63
SMG5-204ENST00000476954 OR4A47Q6IF82 309 aa11.12□□□□□ -0.63
SMG5-204ENST00000476954 Q6ZRM9 215 aa11.12□□□□□ -0.63
SMG5-204ENST00000476954 SVOPQ8N4V2 548 aa11.12□□□□□ -0.63
SMG5-204ENST00000476954 TTC9CQ8N5M4 171 aa11.12□□□□□ -0.63
SMG5-204ENST00000476954 Q8NAQ8 132 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms