RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 BMPR1BO00238 502 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 PDCD6O75340 191 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 DEDDO75618 318 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 GPX5O75715 221 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 BAG2O95816 211 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 ALPLP05186 524 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 FCGR1AP12314 374 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 MGMTP16455 207 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 IGFBP3P17936 291 aaPredicted RBP3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 GABRB1P18505 474 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 AADACP22760 399 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 MC5RP33032 325 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 LINC00205P59089 165 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 PJVKQ0ZLH3 352 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 FXYD3Q14802 87 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 TATDN3Q17R31 274 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 RPEL1Q2QD12 228 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 AWAT2Q6E213 333 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 RPL22L1Q6P5R6 122 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 CEMP1Q6PRD7 247 aaPredicted RBP3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 GLIPR1L1Q6UWM5 242 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 CCDC197Q8NCU1 140 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 OR52I1Q8NGK6 324 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 OR13C5Q8NGS8 318 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 IL1F10Q8WWZ1 152 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 MUL1Q969V5 352 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 SLC7A6OSQ96CW6 309 aaPredicted RBP3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 CENPNQ96H22 339 aaPredicted RBP3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 ABHD14BQ96IU4 210 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 TSNAXQ99598 290 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 AGMATQ9BSE5 352 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 SELENOIQ9C0D9 397 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 TINAGL1Q9GZM7 467 aaPredicted RBP3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 BANF2Q9H503 90 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 AMBNQ9NP70 447 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 ZC4H2Q9NQZ6 224 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 KCNIP1Q9NZI2 227 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 PEMTQ9UBM1 199 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 STEAP1Q9UHE8 339 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 AP4S1Q9Y587 144 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 A0A0B4J203 849 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 A0A0J9YWU9 116 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 TRBV5-5A0A0J9YX44 114 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 ITGB1BP1O14713 200 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 AIREO43918 545 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 PROP1O75360 226 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 CRTAPO75718 401 aaPredicted RBP3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 IGLV2-23P01705 113 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 CRYGBP07316 175 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 LIMS3P0CW19 117 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 LIMS4P0CW20 117 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 EDN2P20800 178 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 RPS16P62249 146 aaKnown RBP3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 RPS11P62280 158 aaKnown RBP eCLIP3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 TNFRSF9Q07011 255 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 DEFB114Q30KQ6 69 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 CCDC58Q4VC31 144 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 ZNF880Q6PDB4 577 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 PDPNQ86YL7 162 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 JAGN1Q8N5M9 183 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 ZNF383Q8NA42 475 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 DRAXINQ8NBI3 349 aaPredicted RBP3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 RHOXF1Q8NHV9 184 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 RNF141Q8WVD5 230 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 SNAPC3Q92966 411 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 FAM46BQ96A09 425 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 SMIM19Q96E16 107 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 USMG5Q96IX5 58 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 TMEM68Q96MH6 324 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 SULT4A1Q9BR01 284 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 GGTLC1Q9BX51 225 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 MRPS18AQ9NVS2 196 aaKnown RBP3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 ABRACLQ9P1F3 81 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 CKLFQ9UBR5 152 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 ZNF230Q9UIE0 474 aaPredicted RBP3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 KLK5Q9Y337 293 aaPredicted RBP3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 LRRC42Q9Y546 428 aa3.84□□□□□ -1.79
SNRNP40-204ENST00000474025 TRBV5-7A0A0A0MS05 114 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 MSGN1A6NI15 193 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 C2orf70A6NJV1 201 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 EI24O14681 340 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 OGG1O15527 345 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 ATP8B1O43520 1251 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 NDUFB8O95169 186 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 NAPSAO96009 420 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 LALBAP00709 142 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 APOA2P02652 100 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 APELAP0DMC3 54 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 FOLR2P14207 255 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 CAPGP40121 348 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 KIR2DS2P43631 304 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 LGALS7P47929 136 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 ETV1P50549 477 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 RHOGP84095 191 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 EXOSC2Q13868 293 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 GUCA2BQ16661 112 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 MRGPRG-AS1Q2M3A8 158 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 ZIK1Q3SY52 487 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 Q499Y3 187 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms