RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 CCL28Q9NRJ3 127 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 C1RLQ9NZP8 487 aa7.41□□□□□ -1.22
PDGFC-202ENST00000422544 ZNF107Q9UII5 783 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-202ENST00000422544 H7C2Y5 167 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 KCNAB3O43448 404 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 SLC22A5O76082 557 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 OR2F2O95006 317 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 RAB3DO95716 219 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 CSF1P09603 554 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 HKR1P10072 659 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 TBPP20226 339 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 DUTP33316 252 aaKnown RBP7.4□□□□□ -1.22
PDGFC-202ENST00000422544 BLCAPP62952 87 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 FAAP20Q6NZ36 180 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 TMEM17Q86X19 198 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 OR5AN1Q8NGI8 311 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 MOB3AQ96BX8 217 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 GPHA2Q96T91 129 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 RAB18Q9NP72 206 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 TAS2R8Q9NYW2 309 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 PTTG2Q9NZH5 202 aa7.4□□□□□ -1.22
PDGFC-202ENST00000422544 ANKRD20A5PA0PJZ0 165 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 OR5H14A6NHG9 310 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 SH2D7A6NKC9 451 aaPredicted RBP7.39□□□□□ -1.23
PDGFC-202ENST00000422544 NCBP2LA6PVI3 153 aaKnown RBP7.39□□□□□ -1.23
PDGFC-202ENST00000422544 LINC00473A8K010 186 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 TNFSF12O43508 249 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 AMY1AP04745 511 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 AMY2AP04746 511 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 ZNF735P0CB33 412 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 AKAIN1P0CW23 69 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 GNRHRP30968 328 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 MC5RP33032 325 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 THBS3P49746 956 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 F2RL1P55085 397 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 RAG2P55895 527 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 RPL15P61313 204 aaKnown RBP7.39□□□□□ -1.23
PDGFC-202ENST00000422544 RPL30P62888 115 aaKnown RBP7.39□□□□□ -1.23
PDGFC-202ENST00000422544 ZNF45Q02386 682 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 BAK1Q16611 211 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 ZNF818PQ6ZRF7 136 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 Q6ZS46 218 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 Q6ZSV7 163 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 C16orf82Q7Z2V1 217 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 MFSD4AQ8N468 514 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 Q8N6K4 173 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 GDPD1Q8N9F7 314 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 BVESQ8NE79 360 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 TRIM63Q969Q1 353 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 AKR1E2Q96JD6 320 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 SDHCQ99643 169 aaPredicted RBP7.39□□□□□ -1.23
PDGFC-202ENST00000422544 NPFFR1Q9GZQ6 430 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 PLSCR3Q9NRY6 295 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 SLC35D1Q9NTN3 355 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 WASHC3Q9Y3C0 194 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 NBEAL2Q6ZNJ1 2754 aa7.39□□□□□ -1.23
PDGFC-202ENST00000422544 TMEM89A2RUT3 159 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 PEX14O75381 377 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 TSPAN9O75954 239 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 NDUFA7O95182 113 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 APOA2P02652 100 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 IGKV1-16P04430 117 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 MDKP21741 143 aaPredicted RBP7.38□□□□□ -1.23
PDGFC-202ENST00000422544 CNTFRP26992 372 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 RPS16P62249 146 aaKnown RBP7.38□□□□□ -1.23
PDGFC-202ENST00000422544 EIF4EBP1Q13541 118 aaPredicted RBP7.38□□□□□ -1.23
PDGFC-202ENST00000422544 KLF9Q13886 244 aaPredicted RBP7.38□□□□□ -1.23
PDGFC-202ENST00000422544 MEF2DQ14814 521 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 MSMO1Q15800 293 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 SCGB2B2Q4G0G5 96 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 ABCA11PQ4W5N1 156 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 OR2B11Q5JQS5 317 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 AADACL3Q5VUY0 350 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 LINC00299Q6ZSB3 139 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 TOMM5Q8N4H5 51 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 ARRDC1Q8N5I2 433 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 C5orf56Q8N8D9 126 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 ZBTB34Q8NCN2 500 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 OR4C16Q8NGL9 310 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 OR4C13Q8NGP0 309 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 TERB2Q8NHR7 220 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 DDB2Q92466 427 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 ADTRPQ96IZ2 230 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 HSD17B10Q99714 261 aaKnown RBP7.38□□□□□ -1.23
PDGFC-202ENST00000422544 FXYD6Q9H0Q3 95 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 AKIP1Q9NQ31 210 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 SIGLEC9Q9Y336 463 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 MOB4Q9Y3A3 225 aa7.38□□□□□ -1.23
PDGFC-202ENST00000422544 DISC1C4P0D8 188 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 M0QZK8 103 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 FCGR3BO75015 233 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 PGLYRP1O75594 196 aaPredicted RBP7.37□□□□□ -1.23
PDGFC-202ENST00000422544 PGAM2P15259 253 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 PI3P19957 117 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 PPP5CP53041 499 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 UCP3P55916 312 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 AP3S2P59780 193 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 TAGLNQ01995 201 aaKnown RBP7.37□□□□□ -1.23
PDGFC-202ENST00000422544 MMDQ15546 238 aa7.37□□□□□ -1.23
PDGFC-202ENST00000422544 RTL8BQ17RB0 113 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms