RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 ZNF580Q9UK33 172 aa14.77□□□□□ -0.05
TRIM56-202ENST00000412507 G3V318 75 aa14.76□□□□□ -0.05
TRIM56-202ENST00000412507 FCN1O00602 326 aa14.76□□□□□ -0.05
TRIM56-202ENST00000412507 IGHG4P01861 327 aa14.76□□□□□ -0.05
TRIM56-202ENST00000412507 ELANEP08246 267 aa14.76□□□□□ -0.05
TRIM56-202ENST00000412507 NDPQ00604 133 aa14.76□□□□□ -0.05
TRIM56-202ENST00000412507 FOXE3Q13461 319 aa14.76□□□□□ -0.05
TRIM56-202ENST00000412507 BEAN1Q3B7T3 259 aa14.76□□□□□ -0.05
TRIM56-202ENST00000412507 CXorf66Q5JRM2 361 aaPredicted RBP14.76□□□□□ -0.05
TRIM56-202ENST00000412507 UBE2NLQ5JXB2 153 aa14.76□□□□□ -0.05
TRIM56-202ENST00000412507 GVQW1Q8N7I0 195 aa14.76□□□□□ -0.05
TRIM56-202ENST00000412507 SAMD12Q8N8I0 201 aa14.76□□□□□ -0.05
TRIM56-202ENST00000412507 SLC25A46Q96AG3 418 aa14.76□□□□□ -0.05
TRIM56-202ENST00000412507 FLYWCH2Q96CP2 140 aaKnown RBP14.76□□□□□ -0.05
TRIM56-202ENST00000412507 CLCC1Q96S66 551 aa14.76□□□□□ -0.05
TRIM56-202ENST00000412507 TSNAXQ99598 290 aaKnown RBP14.76□□□□□ -0.05
TRIM56-202ENST00000412507 METTL1Q9UBP6 276 aaKnown RBP14.76□□□□□ -0.05
TRIM56-202ENST00000412507 OR2W1Q9Y3N9 320 aa14.76□□□□□ -0.05
TRIM56-202ENST00000412507 OR5H8P0DN80 308 aa14.75□□□□□ -0.05
TRIM56-202ENST00000412507 THBS3P49746 956 aa14.75□□□□□ -0.05
TRIM56-202ENST00000412507 ETV3LQ6ZN32 361 aa14.75□□□□□ -0.05
TRIM56-202ENST00000412507 BVESQ8NE79 360 aa14.75□□□□□ -0.05
TRIM56-202ENST00000412507 WFDC9Q8NEX5 89 aa14.75□□□□□ -0.05
TRIM56-202ENST00000412507 BEST4Q8NFU0 473 aa14.75□□□□□ -0.05
TRIM56-202ENST00000412507 S100A16Q96FQ6 103 aaKnown RBP14.75□□□□□ -0.05
TRIM56-202ENST00000412507 NAA50Q9GZZ1 169 aaKnown RBP14.75□□□□□ -0.05
TRIM56-202ENST00000412507 FBXO7Q9Y3I1 522 aa14.75□□□□□ -0.05
TRIM56-202ENST00000412507 TGP01266 2768 aa14.75□□□□□ -0.05
TRIM56-202ENST00000412507 TRAV41A0A0B4J266 112 aa14.74□□□□□ -0.05
TRIM56-202ENST00000412507 XRCC3O43542 346 aa14.74□□□□□ -0.05
TRIM56-202ENST00000412507 HLA-DQB1P01920 261 aa14.74□□□□□ -0.05
TRIM56-202ENST00000412507 FCER2P06734 321 aa14.74□□□□□ -0.05
TRIM56-202ENST00000412507 IGLL1P15814 213 aa14.74□□□□□ -0.05
TRIM56-202ENST00000412507 PPIFP30405 207 aaKnown RBP14.74□□□□□ -0.05
TRIM56-202ENST00000412507 DUTP33316 252 aaKnown RBP14.74□□□□□ -0.05
TRIM56-202ENST00000412507 RPL5P46777 297 aaKnown RBP14.74□□□□□ -0.05
TRIM56-202ENST00000412507 LUMP51884 338 aaPredicted RBP14.74□□□□□ -0.05
TRIM56-202ENST00000412507 CX3CL1P78423 397 aa14.74□□□□□ -0.05
TRIM56-202ENST00000412507 ZNF660Q6AZW8 331 aaPredicted RBP14.74□□□□□ -0.05
TRIM56-202ENST00000412507 HOGA1Q86XE5 327 aa14.74□□□□□ -0.05
TRIM56-202ENST00000412507 ZNF695Q8IW36 515 aa14.74□□□□□ -0.05
TRIM56-202ENST00000412507 RNF152Q8N8N0 203 aa14.74□□□□□ -0.05
TRIM56-202ENST00000412507 ABHD5Q8WTS1 349 aa14.74□□□□□ -0.05
TRIM56-202ENST00000412507 DNAH3Q8TD57 4116 aa14.73□□□□□ -0.05
TRIM56-202ENST00000412507 IGKV1D-13A0A0B4J2D9 117 aa14.73□□□□□ -0.05
TRIM56-202ENST00000412507 MEIS3P1A6NDR6 274 aa14.73□□□□□ -0.05
TRIM56-202ENST00000412507 LINC00473A8K010 186 aa14.73□□□□□ -0.05
TRIM56-202ENST00000412507 SLC25A17O43808 307 aa14.73□□□□□ -0.05
TRIM56-202ENST00000412507 SPDEFO95238 335 aa14.73□□□□□ -0.05
TRIM56-202ENST00000412507 IGKV1-13P0DP09 117 aa14.73□□□□□ -0.05
TRIM56-202ENST00000412507 PSMB8P28062 276 aa14.73□□□□□ -0.05
TRIM56-202ENST00000412507 ARPC4P59998 168 aa14.73□□□□□ -0.05
TRIM56-202ENST00000412507 ECSCRQ19T08 205 aa14.73□□□□□ -0.05
TRIM56-202ENST00000412507 PDLIM3Q53GG5 364 aaPredicted RBP14.73□□□□□ -0.05
TRIM56-202ENST00000412507 ZNF645Q8N7E2 425 aa14.73□□□□□ -0.05
TRIM56-202ENST00000412507 KCTD12Q96CX2 325 aaKnown RBP14.73□□□□□ -0.05
TRIM56-202ENST00000412507 TPSG1Q9NRR2 321 aa14.73□□□□□ -0.05
TRIM56-202ENST00000412507 A3GALT2U3KPV4 340 aa14.73□□□□□ -0.05
TRIM56-202ENST00000412507 CA2P00918 260 aa14.72□□□□□ -0.05
TRIM56-202ENST00000412507 IGLV2-23P01705 113 aa14.72□□□□□ -0.05
TRIM56-202ENST00000412507 SLC6A1P30531 599 aa14.72□□□□□ -0.05
TRIM56-202ENST00000412507 CDX1P47902 265 aaPredicted RBP14.72□□□□□ -0.05
TRIM56-202ENST00000412507 TAGLNQ01995 201 aaKnown RBP14.72□□□□□ -0.05
TRIM56-202ENST00000412507 CBX3Q13185 183 aa14.72□□□□□ -0.05
TRIM56-202ENST00000412507 RTL8BQ17RB0 113 aa14.72□□□□□ -0.05
TRIM56-202ENST00000412507 TMEM177Q53S58 311 aa14.72□□□□□ -0.05
TRIM56-202ENST00000412507 KPRPQ5T749 579 aaPredicted RBP14.72□□□□□ -0.05
TRIM56-202ENST00000412507 ANKRD13BQ86YJ7 626 aa14.72□□□□□ -0.05
TRIM56-202ENST00000412507 MRPL41Q8IXM3 137 aaKnown RBP14.72□□□□□ -0.05
TRIM56-202ENST00000412507 LINC00482Q8N8I6 264 aa14.72□□□□□ -0.05
TRIM56-202ENST00000412507 DDB2Q92466 427 aa14.72□□□□□ -0.05
TRIM56-202ENST00000412507 ADTRPQ96IZ2 230 aa14.72□□□□□ -0.05
TRIM56-202ENST00000412507 HARBI1Q96MB7 349 aa14.72□□□□□ -0.05
TRIM56-202ENST00000412507 DUX3Q96PT4 197 aa14.72□□□□□ -0.05
TRIM56-202ENST00000412507 FAM103A1Q9BTL3 118 aaKnown RBP14.72□□□□□ -0.05
TRIM56-202ENST00000412507 COMMD3Q9UBI1 195 aa14.72□□□□□ -0.05
TRIM56-202ENST00000412507 TUSC2O75896 110 aa14.71□□□□□ -0.05
TRIM56-202ENST00000412507 IGLV1-40P01703 118 aa14.71□□□□□ -0.05
TRIM56-202ENST00000412507 RRASP10301 218 aa14.71□□□□□ -0.05
TRIM56-202ENST00000412507 EGR2P11161 476 aaPredicted RBP14.71□□□□□ -0.05
TRIM56-202ENST00000412507 MYCNOSP40205 109 aa14.71□□□□□ -0.05
TRIM56-202ENST00000412507 CBX5P45973 191 aa14.71□□□□□ -0.05
TRIM56-202ENST00000412507 LGALS7P47929 136 aa14.71□□□□□ -0.05
TRIM56-202ENST00000412507 ALDH3B2P48448 385 aa14.71□□□□□ -0.05
TRIM56-202ENST00000412507 CRIP2P52943 208 aaPredicted RBP14.71□□□□□ -0.05
TRIM56-202ENST00000412507 TAS2R20P59543 309 aa14.71□□□□□ -0.05
TRIM56-202ENST00000412507 TMEM69Q5SWH9 247 aa14.71□□□□□ -0.05
TRIM56-202ENST00000412507 GPR107Q5VW38 600 aa14.71□□□□□ -0.05
TRIM56-202ENST00000412507 MINDY2Q8NBR6 621 aa14.71□□□□□ -0.05
TRIM56-202ENST00000412507 RAX2Q96IS3 184 aa14.71□□□□□ -0.05
TRIM56-202ENST00000412507 KLK15Q9H2R5 256 aa14.71□□□□□ -0.05
TRIM56-202ENST00000412507 NUBP2Q9Y5Y2 271 aa14.71□□□□□ -0.05
TRIM56-202ENST00000412507 A0A1W2PN81 502 aa14.7□□□□□ -0.06
TRIM56-202ENST00000412507 SRRM4A7MD48 611 aaKnown RBP14.7□□□□□ -0.06
TRIM56-202ENST00000412507 SHOXO15266 292 aa14.7□□□□□ -0.06
TRIM56-202ENST00000412507 GABARAPO95166 117 aa14.7□□□□□ -0.06
TRIM56-202ENST00000412507 IGLV2-14P01704 120 aa14.7□□□□□ -0.06
TRIM56-202ENST00000412507 PRB2P02812 416 aaPredicted RBP14.7□□□□□ -0.06
TRIM56-202ENST00000412507 EIF4EP06730 217 aaKnown RBP14.7□□□□□ -0.06
TRIM56-202ENST00000412507 CHRNA7P36544 502 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms