RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CTXND1A0A1B0GTU2 59 aa14.46□□□□□ -0.09
PTPRA-205ENST00000399903 KLF7O75840 302 aaPredicted RBP14.46□□□□□ -0.09
PTPRA-205ENST00000399903 IGLV3-1P01715 115 aa14.46□□□□□ -0.09
PTPRA-205ENST00000399903 AMTP48728 403 aa14.46□□□□□ -0.09
PTPRA-205ENST00000399903 LINC01551Q86U37 167 aa14.46□□□□□ -0.09
PTPRA-205ENST00000399903 ST6GALNAC3Q8NDV1 305 aa14.46□□□□□ -0.09
PTPRA-205ENST00000399903 OR1F12Q8NHA8 337 aa14.46□□□□□ -0.09
PTPRA-205ENST00000399903 C19orf25Q9UFG5 118 aaPredicted RBP14.46□□□□□ -0.09
PTPRA-205ENST00000399903 CHCHD2Q9Y6H1 151 aaPredicted RBP14.46□□□□□ -0.09
PTPRA-205ENST00000399903 EDDM3BP56851 147 aa14.46□□□□□ -0.09
PTPRA-205ENST00000399903 SOX8P57073 446 aa14.46□□□□□ -0.09
PTPRA-205ENST00000399903 RPL15P61313 204 aaKnown RBP14.46□□□□□ -0.09
PTPRA-205ENST00000399903 OR5P3Q8WZ94 311 aa14.46□□□□□ -0.09
PTPRA-205ENST00000399903 C20orf144Q9BQM9 153 aa14.46□□□□□ -0.09
PTPRA-205ENST00000399903 VPS25Q9BRG1 176 aa14.46□□□□□ -0.09
PTPRA-205ENST00000399903 AGMATQ9BSE5 352 aa14.46□□□□□ -0.09
PTPRA-205ENST00000399903 MRPL18Q9H0U6 180 aaKnown RBP14.46□□□□□ -0.09
PTPRA-205ENST00000399903 RANP62826 216 aaKnown RBP14.46□□□□□ -0.1
PTPRA-205ENST00000399903 IGFBP7Q16270 282 aa14.46□□□□□ -0.1
PTPRA-205ENST00000399903 NABP1Q96AH0 204 aa14.46□□□□□ -0.1
PTPRA-205ENST00000399903 ARRDC1-AS1Q9H2J1 176 aa14.46□□□□□ -0.1
PTPRA-205ENST00000399903 ZFHX4Q86UP3 3567 aa14.46□□□□□ -0.1
PTPRA-205ENST00000399903 WIPI2Q9Y4P8 454 aa14.45□□□□□ -0.1
PTPRA-205ENST00000399903 RNF114Q9Y508 228 aa14.45□□□□□ -0.1
PTPRA-205ENST00000399903 RBFOX2O43251 390 aaKnown RBP eCLIP14.45□□□□□ -0.13e-8■■■■■ 34.2
PTPRA-205ENST00000399903 CRYABP02511 175 aaKnown RBP14.45□□□□□ -0.1
PTPRA-205ENST00000399903 KCNMB1Q16558 191 aa14.45□□□□□ -0.1
PTPRA-205ENST00000399903 C20orf204Q6ZNR8 217 aa14.45□□□□□ -0.1
PTPRA-205ENST00000399903 YRDCQ86U90 279 aaKnown RBP14.45□□□□□ -0.1
PTPRA-205ENST00000399903 WNT5BQ9H1J7 359 aa14.45□□□□□ -0.1
PTPRA-205ENST00000399903 TNFSF11O14788 317 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 COX5AP20674 150 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 CTSSP25774 331 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 GNB1P62873 340 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 ZNF816Q0VGE8 651 aaPredicted RBP14.44□□□□□ -0.1
PTPRA-205ENST00000399903 OR8B8Q15620 311 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 SAPCD1Q5SSQ6 148 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 FBXW9Q5XUX1 488 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 FBXL7Q9UJT9 491 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 KIR2DS1A0A191URI9 304 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 SNURFLB1AK76 121 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 CBR3O75828 277 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 COX6A1P12074 109 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 KIR2DS4P43632 304 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 SUMO3P55854 103 aaPredicted RBP14.44□□□□□ -0.1
PTPRA-205ENST00000399903 KIR2DS1Q14954 304 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 OR4C5Q8NGB2 326 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 PLSCR2Q9NRY7 297 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 ZNF586Q9NXT0 402 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 MED13Q9UHV7 2174 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 IGHV1-45A0A0A0MS14 117 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 IGKV1-39P01597 117 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 IGKV1-5P01602 117 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 IGKV1D-39P04432 117 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 ZNF808Q8N4W9 903 aaPredicted RBP14.44□□□□□ -0.1
PTPRA-205ENST00000399903 ELOVL5Q9NYP7 299 aa14.44□□□□□ -0.1
PTPRA-205ENST00000399903 A0A1W2PPV4 95 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 TDGF1P13385 188 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 RBX1P62877 108 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 LCN2P80188 198 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 TEX43Q6ZNM6 134 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 SFRP2Q96HF1 295 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 ZNF703Q9H7S9 590 aaPredicted RBP14.43□□□□□ -0.1
PTPRA-205ENST00000399903 RP1L1Q8IWN7 2480 aaPredicted RBP14.43□□□□□ -0.1
PTPRA-205ENST00000399903 SVILO95425 2214 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 EXPH5Q8NEV8 1989 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 LNP1A1A4G5 178 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 TYMSP04818 313 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 TCL1AP56279 114 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 HIST3H3Q16695 136 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 FAM19A2Q8N3H0 131 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 OR56B2PQ8NGI1 322 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 FGFBP3Q8TAT2 258 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 TP53TG3Q9ULZ0 132 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 DSPP15924 2871 aaKnown RBP14.43□□□□□ -0.1
PTPRA-205ENST00000399903 TRAPPC2LH3BP13 241 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 CDC34P49427 236 aaPredicted RBP14.43□□□□□ -0.1
PTPRA-205ENST00000399903 VAMP3Q15836 100 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 RPS19BP1Q86WX3 136 aaKnown RBP14.43□□□□□ -0.1
PTPRA-205ENST00000399903 LAMTOR2Q9Y2Q5 125 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 OR2W1Q9Y3N9 320 aa14.43□□□□□ -0.1
PTPRA-205ENST00000399903 M0QZ24 198 aa14.42□□□□□ -0.1
PTPRA-205ENST00000399903 SLC25A6P12236 298 aa14.42□□□□□ -0.1
PTPRA-205ENST00000399903 C10orf35Q96D05 121 aa14.42□□□□□ -0.1
PTPRA-205ENST00000399903 ALKBH7Q9BT30 221 aaPredicted RBP14.42□□□□□ -0.1
PTPRA-205ENST00000399903 TBL2Q9Y4P3 447 aaKnown RBP14.42□□□□□ -0.1
PTPRA-205ENST00000399903 NDUFB8O95169 186 aa14.42□□□□□ -0.1
PTPRA-205ENST00000399903 IGHEP01854 428 aa14.42□□□□□ -0.1
PTPRA-205ENST00000399903 PAFAH1B2P68402 229 aa14.42□□□□□ -0.1
PTPRA-205ENST00000399903 HTD2P86397 168 aa14.42□□□□□ -0.1
PTPRA-205ENST00000399903 MAJINQ3KP22 176 aa14.42□□□□□ -0.1
PTPRA-205ENST00000399903 ZDHHC16Q969W1 377 aa14.42□□□□□ -0.1
PTPRA-205ENST00000399903 FREM1Q5H8C1 2179 aa14.42□□□□□ -0.1
PTPRA-205ENST00000399903 COL8A2P25067 703 aa14.41□□□□□ -0.1
PTPRA-205ENST00000399903 G6PCP35575 357 aa14.41□□□□□ -0.1
PTPRA-205ENST00000399903 OR10G8Q8NGN5 311 aa14.41□□□□□ -0.1
PTPRA-205ENST00000399903 DOCK10Q96BY6 2186 aa14.41□□□□□ -0.1
PTPRA-205ENST00000399903 OTX1P32242 354 aaPredicted RBP14.41□□□□□ -0.1
PTPRA-205ENST00000399903 PSG4Q00888 419 aa14.41□□□□□ -0.1
PTPRA-205ENST00000399903 OR10P1Q8NGE3 313 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 206.4 ms