RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 CXCL1P09341 107 aa9.9□□□□□ -0.82
UBE2D3-209ENST00000394804 LHX2P50458 406 aa9.9□□□□□ -0.82
UBE2D3-209ENST00000394804 SPSB3Q6PJ21 355 aa9.9□□□□□ -0.82
UBE2D3-209ENST00000394804 TPRX1Q8N7U7 411 aa9.9□□□□□ -0.82
UBE2D3-209ENST00000394804 OR10G8Q8NGN5 311 aa9.9□□□□□ -0.82
UBE2D3-209ENST00000394804 TPRP12270 2363 aaKnown RBP9.9□□□□□ -0.83
UBE2D3-209ENST00000394804 LRRC30A6NM36 301 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 SRP14P37108 136 aaKnown RBP9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 KIR2DS2P43631 304 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 ERVFC1-1P60608 527 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 RTL8BQ17RB0 113 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 ALKBH6Q3KRA9 238 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 TMPRSS7Q7RTY8 843 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 EGLN1Q9GZT9 426 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 AURKAIP1Q9NWT8 199 aaPredicted RBP9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 ZDHHC8Q9ULC8 765 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 PTPRZ1P23471 2315 aaPredicted RBP9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 PINLYPA6NC86 204 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 IGHV3-13P01766 116 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 IGHV3-7P01780 117 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 APOA2P02652 100 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 DDTP30046 118 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 ZNF826PQ6ZT77 177 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 OR4S2Q8NH73 311 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 ACY3Q96HD9 319 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 SLC35E1Q96K37 410 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 PROK2Q9HC23 129 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 MSL2Q9HCI7 577 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 ZNF407Q9C0G0 2248 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 EP300Q09472 2414 aaPredicted RBP9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 EML5Q05BV3 1969 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 TRGV10A0A0A0MS01 117 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 RAB7AP51149 207 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 CLDN18P56856 261 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 SSTP61278 116 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 GAMTQ14353 236 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 SPNS3Q6ZMD2 512 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 MYPOPQ86VE0 399 aaPredicted RBP9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 MBD3L1Q8WWY6 194 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 ZNF586Q9NXT0 402 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 MUC6Q6W4X9 2439 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 FOXG1P55316 489 aaPredicted RBP9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 PLPPR1Q8TBJ4 325 aa9.89□□□□□ -0.83
UBE2D3-209ENST00000394804 ODAMA1E959 279 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 M0R1B8 84 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 MPDU1O75352 247 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 CNN1P51911 297 aaKnown RBP9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 ERVFRD-1P60508 538 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 COL10A1Q03692 680 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 DBX2Q6ZNG2 339 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 SIGLECL1Q8N7X8 197 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 SSMEM1Q8WWF3 244 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 RHOVQ96L33 236 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 LRFN3Q9BTN0 628 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 SH2D2AQ9NP31 389 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 TUBG2Q9NRH3 451 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 TRAV17A0A0B4J275 112 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 NKX6-3A6NJ46 265 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 AQP7O14520 342 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 AGFG2O95081 481 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 NDUFB7P17568 137 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 TOMM20LQ6UXN7 152 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 TMEM183AQ8IXX5 376 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 ZNF331Q9NQX6 463 aaPredicted RBP9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 OR6C3Q9NZP0 311 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 DIDO1Q9BTC0 2240 aaKnown RBP9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 NDUFB4O95168 129 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 GFRA1P56159 465 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 SOX8P57073 446 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 HERPUD1Q15011 391 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 LYG1Q8N1E2 194 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 SGMS2Q8NHU3 365 aa9.88□□□□□ -0.83
UBE2D3-209ENST00000394804 RIF1Q5UIP0 2472 aaKnown RBP9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 CXorf1O96002 111 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 Q6ZSR3 168 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 CMTM2Q8TAZ6 248 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 FKBP11Q9NYL4 201 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 SLC45A2Q9UMX9 530 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 LAMA1P25391 3075 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 MARCH11A6NNE9 402 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 C12orf77C9JDV5 145 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 SPRY3O43610 288 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 HPRT1P00492 218 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 HES3Q5TGS1 186 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 TIPARPQ7Z3E1 657 aaKnown RBP9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 RBMXL3Q8N7X1 1067 aaKnown RBP9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 BORCS7Q96B45 105 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 NOL4LQ96MY1 436 aaPredicted RBP9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 TXNDC17Q9BRA2 123 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 COMMD5Q9GZQ3 224 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 PLA2G2EQ9NZK7 142 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 GCGP01275 180 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 SPCS3P61009 180 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 SLC35E4Q6ICL7 350 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 VSIRQ9H7M9 311 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 TMEM242Q9NWH2 141 aa9.87□□□□□ -0.83
UBE2D3-209ENST00000394804 LY6G6EA0A0G2JKS1 128 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 PRR33A8MZF0 331 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 FCN1O00602 326 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 DKK1O94907 266 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms