RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 MAP1LC3BQ9GZQ8 125 aa11.68□□□□□ -0.54
SF1-205ENST00000377394 PARLQ9H300 379 aa11.68□□□□□ -0.54
SF1-205ENST00000377394 DOCK11Q5JSL3 2073 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 LAMTOR5O43504 91 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 NDUFB8O95169 186 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 SERPINE2P07093 398 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 IL3RAP26951 378 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 ARL16Q0P5N6 197 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 FAM78BQ5VT40 261 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 Q6P435 159 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 TCF23Q7RTU1 214 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 VN1R17PQ8TDU5 208 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 RAB40CQ96S21 281 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 MANBALQ9NQG1 85 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 NPIPB11E5RHQ5 1161 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 S100GP29377 79 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 PLP2Q04941 152 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 OR1C1Q15619 314 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 AARDQ4LEZ3 155 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 COL5A1-AS1Q5SY13 56 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 ABHD17BQ5VST6 288 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 CISD2Q8N5K1 135 aaKnown RBP11.67□□□□□ -0.54
SF1-205ENST00000377394 TMEM251Q8N6I4 163 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 STPG4Q8N801 248 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 OR10V1Q8NGI7 309 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 ZPBPQ9BS86 351 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 TMEM106BQ9NUM4 274 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 TRAPPC1Q9Y5R8 145 aa11.67□□□□□ -0.54
SF1-205ENST00000377394 C9orf172C9J069 976 aa11.66□□□□□ -0.54
SF1-205ENST00000377394 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.66□□□□□ -0.54
SF1-205ENST00000377394 AQP7O14520 342 aa11.66□□□□□ -0.54
SF1-205ENST00000377394 MDH2P40926 338 aaKnown RBP11.66□□□□□ -0.54
SF1-205ENST00000377394 MEF2BQ02080 365 aaPredicted RBP11.66□□□□□ -0.54
SF1-205ENST00000377394 C3AR1Q16581 482 aa11.66□□□□□ -0.54
SF1-205ENST00000377394 PKIBQ9C010 78 aa11.66□□□□□ -0.54
SF1-205ENST00000377394 RNF150Q9ULK6 438 aa11.66□□□□□ -0.54
SF1-205ENST00000377394 MUC3AQ02505 3323 aa11.66□□□□□ -0.54
SF1-205ENST00000377394 TRAV39A0A0B4J263 110 aa11.66□□□□□ -0.54
SF1-205ENST00000377394 DEGS1O15121 323 aa11.66□□□□□ -0.54
SF1-205ENST00000377394 CA6P23280 308 aa11.66□□□□□ -0.54
SF1-205ENST00000377394 RPL15P61313 204 aaKnown RBP11.66□□□□□ -0.54
SF1-205ENST00000377394 TEX43Q6ZNM6 134 aa11.66□□□□□ -0.54
SF1-205ENST00000377394 IL1F10Q8WWZ1 152 aa11.66□□□□□ -0.54
SF1-205ENST00000377394 LSM10Q969L4 123 aaKnown RBP11.66□□□□□ -0.54
SF1-205ENST00000377394 MSL2Q9HCI7 577 aa11.66□□□□□ -0.54
SF1-205ENST00000377394 A0A0U1RQK1 487 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 ZNF320A2RRD8 509 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 IGKV1-5P01602 117 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 GYPAP02724 150 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 OR1L6Q8NGR2 347 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 SCGB1C1Q8TD33 95 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 LHX4Q969G2 390 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 CACNG5Q9UF02 275 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 CELSR3Q9NYQ7 3312 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 IGKV1D-33P01593 117 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 IGKV1-33P01594 117 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 PTTG1IPP53801 180 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 TMEM41BQ5BJD5 291 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 AGMATQ9BSE5 352 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 VAMP8Q9BV40 100 aa11.65□□□□□ -0.54
SF1-205ENST00000377394 PIGBOS1A0A0B4J2F0 54 aa11.65□□□□□ -0.55
SF1-205ENST00000377394 C20orf202A1L168 122 aa11.65□□□□□ -0.55
SF1-205ENST00000377394 C19orf67A6NJJ6 358 aa11.65□□□□□ -0.55
SF1-205ENST00000377394 TYMSP04818 313 aa11.65□□□□□ -0.55
SF1-205ENST00000377394 IAPPP10997 89 aa11.65□□□□□ -0.55
SF1-205ENST00000377394 RNF151Q2KHN1 245 aa11.65□□□□□ -0.55
SF1-205ENST00000377394 ZNF585BQ52M93 769 aa11.65□□□□□ -0.55
SF1-205ENST00000377394 MRPL52Q86TS9 123 aaKnown RBP11.65□□□□□ -0.55
SF1-205ENST00000377394 HAPLN4Q86UW8 402 aa11.65□□□□□ -0.55
SF1-205ENST00000377394 CMTM2Q8TAZ6 248 aa11.65□□□□□ -0.55
SF1-205ENST00000377394 SLC35E1Q96K37 410 aa11.65□□□□□ -0.55
SF1-205ENST00000377394 HSPB9Q9BQS6 159 aa11.65□□□□□ -0.55
SF1-205ENST00000377394 GP6Q9HCN6 339 aa11.65□□□□□ -0.55
SF1-205ENST00000377394 TP53TG3Q9ULZ0 132 aa11.65□□□□□ -0.55
SF1-205ENST00000377394 RNF114Q9Y508 228 aa11.65□□□□□ -0.55
SF1-205ENST00000377394 A0A1W2PNU3 283 aaPredicted RBP11.64□□□□□ -0.55
SF1-205ENST00000377394 LNP1A1A4G5 178 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 J3QT63 122 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 SYNGR2O43760 224 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 EGR1P18146 543 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 LINC00310P59036 64 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 WDR86Q86TI4 376 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 OR4F5Q8NH21 305 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 OR4F4Q96R69 305 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 CDX2Q99626 313 aaPredicted RBP11.64□□□□□ -0.55
SF1-205ENST00000377394 PATZ1Q9HBE1 687 aaKnown RBP11.64□□□□□ -0.55
SF1-205ENST00000377394 MT-CO3P00414 261 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 LPAL2Q16609 132 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 SPATA46Q5T0L3 261 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 ZNF497Q6ZNH5 498 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 LINC00696Q6ZRV3 163 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 RPP25LQ8N5L8 163 aaKnown RBP11.64□□□□□ -0.55
SF1-205ENST00000377394 ZNF525Q8N782 197 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 OR1K1Q8NGR3 316 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 CIB3Q96Q77 187 aaPredicted RBP11.64□□□□□ -0.55
SF1-205ENST00000377394 STRADBQ9C0K7 418 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 PPP1R3CQ9UQK1 317 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 R4GN57 208 aa11.64□□□□□ -0.55
SF1-205ENST00000377394 WDFY4Q6ZS81 3184 aa11.63□□□□□ -0.55
SF1-205ENST00000377394 C1QTNF9BB2RNN3 333 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms