RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 AKR1C8PQ5T2L2 129 aa12.94□□□□□ -0.34
CCDC40-202ENST00000374876 ZBTB34Q8NCN2 500 aa12.94□□□□□ -0.34
CCDC40-202ENST00000374876 TMEM204Q9BSN7 226 aa12.94□□□□□ -0.34
CCDC40-202ENST00000374876 ABHD14AQ9BUJ0 271 aa12.94□□□□□ -0.34
CCDC40-202ENST00000374876 SLC35B3Q9H1N7 401 aa12.94□□□□□ -0.34
CCDC40-202ENST00000374876 OR2D2Q9H210 308 aa12.94□□□□□ -0.34
CCDC40-202ENST00000374876 RNF150Q9ULK6 438 aa12.94□□□□□ -0.34
CCDC40-202ENST00000374876 SHISA9B4DS77 424 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 IAPPP10997 89 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 OR52L2PQ8NGH6 319 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 MRGPRDQ8TDS7 321 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 COQ2Q96H96 371 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 SMCO4Q9NRQ5 59 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 PSENENQ9NZ42 101 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 A0A1B0GW64 132 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 BTBD17A6NE02 478 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 IFNL4K9M1U5 179 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 GOSR1O95249 250 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 TFF1P04155 84 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 COL10A1Q03692 680 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 KRBOX4Q5JUW0 171 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 FAM169BQ8N8A8 192 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 UBTD1Q9HAC8 227 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 POLQO75417 2590 aa12.93□□□□□ -0.34
CCDC40-202ENST00000374876 TAS2R30P59541 319 aa12.92□□□□□ -0.34
CCDC40-202ENST00000374876 FGFRL1Q8N441 504 aa12.92□□□□□ -0.34
CCDC40-202ENST00000374876 LURAP1Q96LR2 239 aa12.92□□□□□ -0.34
CCDC40-202ENST00000374876 SMDT1Q9H4I9 107 aa12.92□□□□□ -0.34
CCDC40-202ENST00000374876 RPS10P5Q9NQ39 176 aa12.92□□□□□ -0.34
CCDC40-202ENST00000374876 M0R036 132 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 CRYAAP02489 173 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 THNSL2Q86YJ6 484 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 OR2Z1Q8NG97 314 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 SCGB1C1Q8TD33 95 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 LRRC29Q8WV35 223 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 METRNQ9UJH8 293 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 MMP24Q9Y5R2 645 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 NOTCH2Q04721 2471 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 RBFOX3A6NFN3 312 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 METTL15P1P0C7V9 234 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 GLIPR1P48060 266 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 CCL20P78556 96 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 CATR1Q13166 79 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 ZNF672Q499Z4 452 aaPredicted RBP12.91□□□□□ -0.34
CCDC40-202ENST00000374876 AWAT1Q58HT5 328 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 SPSB3Q6PJ21 355 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 DPPA3Q6W0C5 159 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 ETV3LQ6ZN32 361 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 CD300LFQ8TDQ1 290 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 CISD1Q9NZ45 108 aaKnown RBP12.91□□□□□ -0.34
CCDC40-202ENST00000374876 DUSP13Q9UII6 198 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 PRELID1Q9Y255 219 aa12.91□□□□□ -0.34
CCDC40-202ENST00000374876 RAMP3O60896 148 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 SNRNP70P08621 437 aaKnown RBP12.9□□□□□ -0.34
CCDC40-202ENST00000374876 OR13C7P0DN81 318 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 AKR1C3P42330 323 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 RAB2AP61019 212 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 HBG1P69891 147 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 HBG2P69892 147 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 C3orf36Q3SXR2 165 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 OR2B11Q5JQS5 317 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 FAM53AQ6NSI3 398 aaPredicted RBP12.9□□□□□ -0.34
CCDC40-202ENST00000374876 TPRX1Q8N7U7 411 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 RXFP4Q8TDU9 374 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 SFT2D1Q8WV19 159 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 RARRES2Q99969 163 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 TOLLIPQ9H0E2 274 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 COA4Q9NYJ1 87 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 PRELID3BQ9Y3B1 194 aa12.9□□□□□ -0.34
CCDC40-202ENST00000374876 A0A1B0GWJ7 208 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 FAM90A26D6RGX4 464 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 E7EQL1 145 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 SSTR5P35346 364 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 MSMO1Q15800 293 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 AVPI1Q5T686 147 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 OR13A1Q8NGR1 328 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 KIAA1456Q9P272 454 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 KIAA2026Q5HYC2 2103 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 PLCE1Q9P212 2302 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 C7orf77A4D0Y5 90 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 SPINT2O43291 252 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 KRASP01116 189 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 PRDX2P32119 198 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 UBE2KP61086 200 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 RPL30P62888 115 aaKnown RBP12.89□□□□□ -0.35
CCDC40-202ENST00000374876 ZNF816Q0VGE8 651 aaPredicted RBP12.89□□□□□ -0.35
CCDC40-202ENST00000374876 SOHLH1Q5JUK2 328 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 SPANXN5Q5MJ07 72 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 VHLLQ6RSH7 139 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 LILRB2Q8N423 598 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 CD177Q8N6Q3 437 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 TCTEX1D2Q8WW35 142 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 CLCC1Q96S66 551 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 C20orf24Q9BUV8 137 aa12.89□□□□□ -0.35
CCDC40-202ENST00000374876 COLCA2A8K830 154 aa12.88□□□□□ -0.35
CCDC40-202ENST00000374876 HBE1P02100 147 aa12.88□□□□□ -0.35
CCDC40-202ENST00000374876 CRYBA1P05813 215 aa12.88□□□□□ -0.35
CCDC40-202ENST00000374876 G6PCP35575 357 aa12.88□□□□□ -0.35
CCDC40-202ENST00000374876 EDDM3AQ14507 147 aa12.88□□□□□ -0.35
CCDC40-202ENST00000374876 TRAT1Q6PIZ9 186 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms