RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 LIN54Q6MZP7 749 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 LAX1Q8IWV1 398 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 OR5AU1Q8NGC0 362 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 MCFD2Q8NI22 146 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 CHPT1Q8WUD6 406 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 FCAMRQ8WWV6 532 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 BORCS5Q969J3 196 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 DIRAS2Q96HU8 199 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 NDUFA13Q9P0J0 144 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 ANAPC10Q9UM13 185 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 PRELID3BQ9Y3B1 194 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 AP4M1O00189 453 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 FBXO24O75426 580 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 PPYP01298 95 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 AADACP22760 399 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 HLA-DMAP28067 261 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 DUTP33316 252 aaKnown RBP12.52□□□□□ -0.41
MRPL55-202ENST00000336300 LGALS7P47929 136 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 RFX2P48378 723 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 TSPAN5P62079 268 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 MRPS10P82664 201 aaKnown RBP12.52□□□□□ -0.41
MRPL55-202ENST00000336300 DYRK1AQ13627 763 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 C5orf64Q2M2E5 130 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 OVCH2Q7RTZ1 564 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 C11orf44Q8N8P7 122 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 ZBTB34Q8NCN2 500 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 OR4X2Q8NGF9 303 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 OR6F1Q8NGZ6 308 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 SECTM1Q8WVN6 248 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 RITA1Q96K30 269 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 SLIRPQ9GZT3 109 aaKnown RBP12.52□□□□□ -0.41
MRPL55-202ENST00000336300 MIXL1Q9H2W2 232 aa12.52□□□□□ -0.41
MRPL55-202ENST00000336300 ZNF107Q9UII5 783 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-202ENST00000336300 RBMX2Q9Y388 322 aaKnown RBP12.52□□□□□ -0.41
MRPL55-202ENST00000336300 PSMB11A5LHX3 300 aa12.51□□□□□ -0.41
MRPL55-202ENST00000336300 RRHO14718 337 aa12.51□□□□□ -0.41
MRPL55-202ENST00000336300 NDUFA3O95167 84 aa12.51□□□□□ -0.41
MRPL55-202ENST00000336300 SPDEFO95238 335 aa12.51□□□□□ -0.41
MRPL55-202ENST00000336300 FXYD4P59646 89 aa12.51□□□□□ -0.41
MRPL55-202ENST00000336300 IL18Q14116 193 aa12.51□□□□□ -0.41
MRPL55-202ENST00000336300 MSMO1Q15800 293 aa12.51□□□□□ -0.41
MRPL55-202ENST00000336300 C2orf68Q2NKX9 166 aa12.51□□□□□ -0.41
MRPL55-202ENST00000336300 ACTBL2Q562R1 376 aa12.51□□□□□ -0.41
MRPL55-202ENST00000336300 DHRS11Q6UWP2 260 aa12.51□□□□□ -0.41
MRPL55-202ENST00000336300 HSD17B10Q99714 261 aaKnown RBP12.51□□□□□ -0.41
MRPL55-202ENST00000336300 ZNF2Q9BSG1 426 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-202ENST00000336300 SLC5A7Q9GZV3 580 aa12.51□□□□□ -0.41
MRPL55-202ENST00000336300 IGKV1D-13A0A0B4J2D9 117 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 SHOXO15266 292 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 HLA-DRB1P01911 266 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 IGKV1-16P04430 117 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 IFNA6P05013 189 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 IGKV1-13P0DP09 117 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 CNTFRP26992 372 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 S100A5P33763 92 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 HRH1P35367 487 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 LINC00205P59089 165 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 PYHIN1Q6K0P9 492 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 ZNF66Q6ZN08 573 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 KCTD9Q7L273 389 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 LYSMD2Q8IV50 215 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 BVESQ8NE79 360 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 RBMXL1Q96E39 390 aaKnown RBP12.5□□□□□ -0.41
MRPL55-202ENST00000336300 ABHD1Q96SE0 405 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 DCUN1D5Q9BTE7 237 aa12.5□□□□□ -0.41
MRPL55-202ENST00000336300 RBM38Q9H0Z9 239 aaKnown RBP12.5□□□□□ -0.41
MRPL55-202ENST00000336300 GABARAPH6UMI1 98 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 OPN1MWP04001 364 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 OPN1MW2P0DN77 364 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 OPN1MW3P0DN78 364 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 CD28P10747 220 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 VDAC1P21796 283 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 SSBP1Q04837 148 aaKnown RBP12.49□□□□□ -0.41
MRPL55-202ENST00000336300 PSG5Q15238 335 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 RNASE12Q5GAN4 147 aaKnown RBP12.49□□□□□ -0.41
MRPL55-202ENST00000336300 LPCAT3Q6P1A2 487 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 TMEM17Q86X19 198 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 STPG2Q8N412 459 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 COMMD1Q8N668 190 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 OR52I2Q8NH67 350 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 TCTEX1D2Q8WW35 142 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 DGCR14Q96DF8 476 aaKnown RBP12.49□□□□□ -0.41
MRPL55-202ENST00000336300 C5orf30Q96GV9 206 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 HARBI1Q96MB7 349 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 NXF2Q9GZY0 626 aaKnown RBP12.49□□□□□ -0.41
MRPL55-202ENST00000336300 MMP27Q9H306 513 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 FBXL15Q9H469 300 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 METTL1Q9UBP6 276 aaKnown RBP12.49□□□□□ -0.41
MRPL55-202ENST00000336300 MTFP1Q9UDX5 166 aa12.49□□□□□ -0.41
MRPL55-202ENST00000336300 TCRBV4S1A1TA0A5B7 111 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 FABP12A6NFH5 140 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 LINC00473A8K010 186 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 FCGR3BO75015 233 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 IGLV2-14P01704 120 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 CSF1P09603 554 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 TBPP20226 339 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 S100GP29377 79 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 CATR1Q13166 79 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 TMEM177Q53S58 311 aa12.48□□□□□ -0.41
MRPL55-202ENST00000336300 PRR31Q5SQ13 230 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms