RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 TMEM189A5PLL7 270 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 FAM27E3Q08E93 113 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 ACSF3Q4G176 576 aaPredicted RBP16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 FHL5Q5TD97 284 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 EBLN2Q6P2I7 272 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 IL19Q9UHD0 177 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 RNF115Q9Y4L5 304 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 MARF1Q9Y4F3 1742 aaKnown RBP16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 A0A087X0M5 115 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 hCG_38984A0A1B0GV85 526 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 A0A1B0GX30 115 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 HERVK_113P61574 105 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 TMEM78Q5T7P6 136 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 ZNF343Q6P1L6 599 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 ELOVL1Q9BW60 279 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 SH3BGRL3Q9H299 93 aa16.03■□□□□ 0.16
SMARCC1-201ENST00000254480 IGHV3-49A0A0A0MS15 119 aa16.02■□□□□ 0.16
SMARCC1-201ENST00000254480 ACAA1P09110 424 aaPredicted RBP16.02■□□□□ 0.16
SMARCC1-201ENST00000254480 OR4C12Q96R67 309 aa16.02■□□□□ 0.16
SMARCC1-201ENST00000254480 TIMP4Q99727 224 aa16.02■□□□□ 0.16
SMARCC1-201ENST00000254480 THSD7AQ9UPZ6 1657 aa16.02■□□□□ 0.16
SMARCC1-201ENST00000254480 IGHV3-66A0A0C4DH42 116 aa16.02■□□□□ 0.16
SMARCC1-201ENST00000254480 FBLL1A6NHQ2 334 aaKnown RBP16.02■□□□□ 0.16
SMARCC1-201ENST00000254480 SEC11BP0C7V7 166 aa16.02■□□□□ 0.16
SMARCC1-201ENST00000254480 FSTP19883 344 aa16.02■□□□□ 0.16
SMARCC1-201ENST00000254480 PNKDQ8N490 385 aa16.02■□□□□ 0.16
SMARCC1-201ENST00000254480 OTOFQ9HC10 1997 aa16.02■□□□□ 0.16
SMARCC1-201ENST00000254480 IGKV3OR2-268A0A0C4DH90 116 aa16.02■□□□□ 0.16
SMARCC1-201ENST00000254480 WDR25Q64LD2 544 aaPredicted RBP16.02■□□□□ 0.16
SMARCC1-201ENST00000254480 COL24A1Q17RW2 1714 aa16.02■□□□□ 0.15
SMARCC1-201ENST00000254480 METTL26Q96S19 204 aa16.02■□□□□ 0.15
SMARCC1-201ENST00000254480 CIDEAO60543 219 aa16.02■□□□□ 0.15
SMARCC1-201ENST00000254480 A0A0G2JMM0 328 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 A0A1W2PPB8 328 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 A0A1W2PRS3 328 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 KIR3DP1A8MWS1 328 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 OR1N2Q8NGR9 330 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 SMIM12Q96EX1 92 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 LOXL4Q96JB6 756 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 PGLYRP4Q96LB8 373 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 RARRES2Q99969 163 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 EGR4Q05215 589 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 OR10J6PQ8NGY7 276 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 BCL2P10415 239 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 VAX1Q5SQQ9 334 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 ZDHHC8Q9ULC8 765 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 SMIM10L1P0DMW3 83 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 OTX1P32242 354 aaPredicted RBP16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 GCSAMQ8N6F7 178 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 SMIM10Q96HG1 83 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 G6PC2Q9NQR9 355 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 RECKO95980 971 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 KIR2DL2P43627 348 aaPredicted RBP16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 WDFY1Q8IWB7 410 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 SELENOHQ8IZQ5 122 aaKnown RBP16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 GPR132Q9UNW8 380 aa16.01■□□□□ 0.15
SMARCC1-201ENST00000254480 RRN3P1Q2M238 152 aa16■□□□□ 0.15
SMARCC1-201ENST00000254480 ZNF818PQ6ZRF7 136 aa16■□□□□ 0.15
SMARCC1-201ENST00000254480 PPP1R32Q7Z5V6 425 aa16■□□□□ 0.15
SMARCC1-201ENST00000254480 PIMREGQ9BSJ6 248 aa16■□□□□ 0.15
SMARCC1-201ENST00000254480 A0A1W2PR77 199 aa16■□□□□ 0.15
SMARCC1-201ENST00000254480 RELBQ01201 579 aa16■□□□□ 0.15
SMARCC1-201ENST00000254480 PQLC2Q6ZP29 291 aa16■□□□□ 0.15
SMARCC1-201ENST00000254480 NEU1Q99519 415 aa16■□□□□ 0.15
SMARCC1-201ENST00000254480 AREGP15514 252 aa16■□□□□ 0.15
SMARCC1-201ENST00000254480 HOXA6P31267 233 aa16■□□□□ 0.15
SMARCC1-201ENST00000254480 ABLIM2Q6H8Q1 611 aa16■□□□□ 0.15
SMARCC1-201ENST00000254480 SHISA5Q8N114 240 aa16■□□□□ 0.15
SMARCC1-201ENST00000254480 HSPB7Q9UBY9 170 aa16■□□□□ 0.15
SMARCC1-201ENST00000254480 SS18L1O75177 396 aaPredicted RBP15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 ZNF324O75467 553 aaPredicted RBP15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 LOC105371242A0A075B767 164 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 THY1P04216 161 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 RPL39P5Q59GN2 51 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 CCL19Q99731 98 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 GDF15Q99988 308 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 IGHV1-69-2A0A0G2JMI3 117 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 B4DEV8 164 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 MAS1LP35410 378 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 RALYQ9UKM9 306 aaKnown RBP15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 HKR1P10072 659 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 KLK15Q9H2R5 256 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 ALPK2Q86TB3 2170 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 MARCH11A6NNE9 402 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 DLL1O00548 723 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 MC5RP33032 325 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 IBA57Q5T440 356 aaKnown RBP15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 SCNM1Q9BWG6 230 aa15.99■□□□□ 0.15
SMARCC1-201ENST00000254480 IFITM10A6NMD0 228 aa15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 IGHV3OR16-8A0A075B7F1 116 aa15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 ZNF207O43670 478 aaKnown RBP15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 AQP3Q92482 292 aa15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 COL5A3P25940 1745 aaPredicted RBP15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 ZNF25P17030 456 aaPredicted RBP15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 UQCRFS1P47985 274 aa15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 WFIKKN1Q96NZ8 548 aa15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 NUDT16L1Q9BRJ7 211 aaKnown RBP15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 HSPB8Q9UJY1 196 aa15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 MOSP00540 346 aa15.98■□□□□ 0.15
SMARCC1-201ENST00000254480 PLAURQ03405 335 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms